FFCP PHASE1:Hg19::chr19:1285977..1285989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1943 | |EntrezGene=1943 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3222 | |HGNC=3222 | ||
|TSSclassifier=strong | |||
|UniProt=O43921 | |UniProt=O43921 | ||
|association_with_transcript=-163bp_to_NM_001405_5end | |association_with_transcript=-163bp_to_NM_001405_5end | ||
|cluster_id=chr19:1285977..1285989,+ | |||
|coexpression_cluster_id=C2364 | |||
|description=CAGE_peak_3_at_EFNA2_5end | |description=CAGE_peak_3_at_EFNA2_5end | ||
|id=chr19:1285977..1285989,+ | |id=chr19:1285977..1285989,+ | ||
|ontology_enrichment_celltype=CL:0000039!3.42e-12!7;CL:0000586!3.42e-12!7;CL:0002322!1.37e-09!5;CL:0000066!9.82e-09!254;CL:0000223!3.36e-08!59;CL:0000083!1.18e-07!4;CL:0000181!4.06e-07!12;CL:0000417!4.06e-07!12;CL:0000668!4.06e-07!12;CL:0000414!4.06e-07!12;CL:0000412!4.06e-07!12;CL:0000182!4.06e-07!12 | |ontology_enrichment_celltype=CL:0000039!3.42e-12!7;CL:0000586!3.42e-12!7;CL:0002322!1.37e-09!5;CL:0000066!9.82e-09!254;CL:0000223!3.36e-08!59;CL:0000083!1.18e-07!4;CL:0000181!4.06e-07!12;CL:0000417!4.06e-07!12;CL:0000668!4.06e-07!12;CL:0000414!4.06e-07!12;CL:0000412!4.06e-07!12;CL:0000182!4.06e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.88e-18;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.61e-18,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.18e-11;11!UBERON:0009497;1.01e-09;13 | |||
|ontology_enrichment_disease=DOID:0050687!3.93e-17!143;DOID:305!1.02e-13!106;DOID:162!3.28e-11!235;DOID:14566!1.15e-10!239;DOID:1793!1.18e-07!4;DOID:3095!2.25e-07!22;DOID:2994!2.25e-07!22 | |ontology_enrichment_disease=DOID:0050687!3.93e-17!143;DOID:305!1.02e-13!106;DOID:162!3.28e-11!235;DOID:14566!1.15e-10!239;DOID:1793!1.18e-07!4;DOID:3095!2.25e-07!22;DOID:2994!2.25e-07!22 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.87e-12!27;UBERON:0005409!2.73e-11!35;UBERON:0004921!5.24e-09!129;UBERON:0004185!5.24e-09!129;UBERON:0001007!9.15e-08!155;UBERON:0001555!9.15e-08!155;UBERON:0007026!9.15e-08!155;UBERON:0002108!5.03e-07!14;UBERON:0004119!6.50e-07!169;UBERON:0000925!6.50e-07!169;UBERON:0006595!6.50e-07!169 | |ontology_enrichment_uberon=UBERON:0000160!3.87e-12!27;UBERON:0005409!2.73e-11!35;UBERON:0004921!5.24e-09!129;UBERON:0004185!5.24e-09!129;UBERON:0001007!9.15e-08!155;UBERON:0001555!9.15e-08!155;UBERON:0007026!9.15e-08!155;UBERON:0002108!5.03e-07!14;UBERON:0004119!6.50e-07!169;UBERON:0000925!6.50e-07!169;UBERON:0006595!6.50e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.75e-12;17!UBERON:0002108;7.66e-12;4!UBERON:0002107;2.25e-11;19!UBERON:0006925;2.25e-11;19!UBERON:0005409;1.14e-09;22!UBERON:0002423;1.05e-08;25!UBERON:0002365;2.75e-07;31!UBERON:0002330;2.75e-07;31!UBERON:0004921;7.00e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.34e-12,17;UBERON:0002108,7.47e-12,4;UBERON:0002107,2.38e-11,19;UBERON:0006925,2.38e-11,19;UBERON:0008836,2.38e-11,19;UBERON:0008835,7.74e-10,22;UBERON:0003894,7.74e-10,22;UBERON:0009854,2.02e-09,23;UBERON:0007499,1.10e-08,25;UBERON:0009497,1.10e-08,25;UBERON:0000015,1.10e-08,25;UBERON:0002423,1.10e-08,25;UBERON:0006235,1.10e-08,25;UBERON:0004161,1.10e-08,25;UBERON:0005409,1.26e-08,25;UBERON:0009856,2.33e-08,26;UBERON:0002365,4.82e-07,31;UBERON:0002330,4.82e-07,31 | |||
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| ||
|short_description=p3@EFNA2 | |short_description=p3@EFNA2 | ||
}} | }} |
Latest revision as of 20:23, 15 September 2015
Short description: | p3@EFNA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_EFNA2_5end |
Coexpression cluster: | C2364_small_rectum_colon_hepatocellular_duodenum_temporal_umbilical |
Association with transcript: | -163bp_to_NM_001405_5end |
EntrezGene: | EFNA2 |
HGNC: | 3222 |
UniProt: | O43921 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.61e-18 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.34e-12 | 17 |
small intestine | 7.47e-12 | 4 |
liver | 2.38e-11 | 19 |
digestive gland | 2.38e-11 | 19 |
liver bud | 2.38e-11 | 19 |
hepatic diverticulum | 7.74e-10 | 22 |
liver primordium | 7.74e-10 | 22 |
digestive tract diverticulum | 2.02e-09 | 23 |
epithelial sac | 1.10e-08 | 25 |
epithelium of foregut-midgut junction | 1.10e-08 | 25 |
anatomical boundary | 1.10e-08 | 25 |
hepatobiliary system | 1.10e-08 | 25 |
foregut-midgut junction | 1.10e-08 | 25 |
septum transversum | 1.10e-08 | 25 |
gastrointestinal system | 1.26e-08 | 25 |
sac | 2.33e-08 | 26 |
exocrine gland | 4.82e-07 | 31 |
exocrine system | 4.82e-07 | 31 |