FFCP PHASE1:Hg19::chr12:102514027..102514036,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:102514027..102514036,- to FFCP PHASE1:Hg19::chr12:102514027..102514036,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79023 | |EntrezGene=79023 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29929 | |HGNC=29929 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-125bp_to_ENST00000552283_5end | |||
|cluster_id=chr12:102514027..102514036,- | |||
|description=CAGE_peak_2_at_NUP37_5end | |||
|id=chr12:102514027..102514036,- | |||
|ontology_enrichment_celltype=CL:0000066!4.11e-19!254;CL:0002076!8.40e-12!43;CL:0000223!6.68e-11!59 | |||
|ontology_enrichment_celltype_v019=CL:0001014;1.82e-11;2!CL:0001016;1.82e-11;2!CL:0002536;3.02e-11;2!CL:0002253;3.02e-11;2!CL:0002535;3.02e-11;2!CL:0000349;4.87e-10;19!CL:0002577;6.34e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.82e-11,2;CL:0001016,1.82e-11,2;CL:0002253,2.02e-11,2;CL:0002535,2.47e-11,2;CL:0002536,2.73e-11,2;CL:0000349,4.44e-10,19;CL:0002577,5.18e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!9.32e-19!106;DOID:0050687!1.17e-14!143;DOID:1749!8.58e-13!14;DOID:162!1.72e-10!235;DOID:14566!6.78e-10!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001557!2.17e-13!19;UBERON:0004119!9.52e-13!169;UBERON:0000925!9.52e-13!169;UBERON:0006595!9.52e-13!169;UBERON:0001737!2.41e-12!9;UBERON:0001004!3.47e-12!72;UBERON:0000065!1.41e-11!53;UBERON:0001007!4.67e-11!155;UBERON:0001555!4.67e-11!155;UBERON:0007026!4.67e-11!155;UBERON:0000077!5.01e-11!130;UBERON:0000072!5.49e-11!46;UBERON:0004921!2.24e-10!129;UBERON:0004185!2.24e-10!129;UBERON:0000344!1.81e-09!12;UBERON:0001041!1.89e-08!98;UBERON:0008947!1.28e-07!38;UBERON:0003258!1.28e-07!38;UBERON:0005631!2.70e-07!14;UBERON:0000158!2.70e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;2.66e-12;7!UBERON:0006955;3.02e-11;2!UBERON:0004801;3.02e-11;2!UBERON:0005631;6.80e-09;10!UBERON:0000158;6.80e-09;10!UBERON:0000478;4.52e-08;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.90e-13,14;UBERON:0000158,1.90e-13,14;UBERON:0000305,2.66e-12,7;UBERON:0006955,2.47e-11,2;UBERON:0004801,2.47e-11,2;UBERON:0004871,6.94e-11,8;UBERON:0000995,3.64e-09,21;UBERON:0005795,8.94e-09,22;UBERON:0003975,8.94e-09,22;UBERON:0000478,4.20e-08,24;UBERON:0004175,8.61e-08,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0.919421224478927,0.6024118375565,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.964044119533928,0.661763836394364,0.217879444092406,0.474541238222193,1.07865046528132,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,1.81876542867756,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0.40101294060657,0.276242966807689,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,1.16828856491525,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0.113942055847001,0,0.718061155278177,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,1.83758992864123,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.489961987071888,1.48000651186684,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0.489473409012935,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.845248493434508,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0.346576998451015,0,0,0,0,0.60511520611056,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.333694205676207,0,0,0.840816489941367,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0.111855431797792,0.196300467230486,0.487671699929078,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.134704106029175,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0.655324116390517,1.31883489114227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0.383829398097213,0,0.919421224478927,0.6024118375565,0.369754010166788,0.154934401160603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0.32592226663359,0.473447805734733,0,0.111410456885174,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.964044119533928,0.661763836394364,0.217879444092406,0.474541238222193,1.07865046528132,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0.368965315629341,0,0.329250856225877,0,0.201057944823262,0.277765335475589,0,0,0,0,0,0,0.462985512576611,0,0,0,0,0,0,0.93733833986777,0.335964256397719,0.141775097242386,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,1.81876542867756,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,0.483437798366489,0.40101294060657,0.276242966807689,0.114814448164607,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0.0890320356467374,0.330569830721956,0,0.255225424989168,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0.95497793895076,1.18785872333055,0.921482106297696,0,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0,1.16828856491525,0.537063524026827,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0.113942055847001,0,0.718061155278177,0.651884231532048,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0.489698424477443,1.83758992864123,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0.450970258243478,0,0,0,0,0,0,0,0,0.489961987071888,1.48000651186684,0,0,0.290268993867255,0.0730893170861856,0.0821154570532092,0.193978032976839,0,0,0,0,0,0.391102765469606,0,0,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0.2249738915515,2.32140586367385,0,0,0,0,0,0,0.959575986597226,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0.694567422971502,0.489473409012935,0,0,0,0,0,0.168942440653073,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0.845248493434508,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.11796972334774,0.183428598521679,0.346576998451015,0,0,0,0,0.60511520611056,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0.496211178389294,0,0.766574565837572,0,0,0,0,0.0887023701626388,0,0.171488009437418,0,0,0,0.333694205676207,0,0,0.840816489941367,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0.430227358820278,0,0,0,1.14553434272025,0,0,0.111855431797792,0.196300467230486,0.487671699929078,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.802413666891683,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0.151557396436479,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.435433495793923,0.342233301085281,0.134704106029175,0,0,0.162806537221949,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@NUP37 | |||
}} | }} |
Latest revision as of 20:44, 15 September 2015
Short description: | p2@NUP37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NUP37_5end |
Coexpression cluster: | NA |
Association with transcript: | -125bp_to_ENST00000552283_5end |
EntrezGene: | NUP37 |
HGNC: | 29929 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.82e-11 | 2 |
immature CD1a-positive Langerhans cell | 1.82e-11 | 2 |
epithelial cell of large intestine | 2.02e-11 | 2 |
epithelial cell of cervix | 2.47e-11 | 2 |
amniotic epithelial cell | 2.73e-11 | 2 |
extraembryonic cell | 4.44e-10 | 19 |
placental epithelial cell | 5.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.90e-13 | 14 |
membranous layer | 1.90e-13 | 14 |
amnion | 2.66e-12 | 7 |
uterine epithelium | 2.47e-11 | 2 |
cervix epithelium | 2.47e-11 | 2 |
somatic layer of lateral plate mesoderm | 6.94e-11 | 8 |
uterus | 3.64e-09 | 21 |
embryonic uterus | 8.94e-09 | 22 |
internal female genitalia | 8.94e-09 | 22 |
extraembryonic structure | 4.20e-08 | 24 |
internal genitalia | 8.61e-08 | 25 |