FFCP PHASE1:Hg19::chr12:103237526..103237543,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5053 | |EntrezGene=5053 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=8582 | |HGNC=8582 | ||
|TSSclassifier=strong | |||
|UniProt=P00439 | |UniProt=P00439 | ||
|association_with_transcript=-44bp_to_S61296_5end | |association_with_transcript=-44bp_to_S61296_5end | ||
|cluster_id=chr12:103237526..103237543,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_PAH_5end | |description=CAGE_peak_8_at_PAH_5end | ||
|id=chr12:103237526..103237543,- | |id=chr12:103237526..103237543,- | ||
|ontology_enrichment_celltype=CL:0000181!1.74e-28!12;CL:0000417!1.74e-28!12;CL:0000668!1.74e-28!12;CL:0000414!1.74e-28!12;CL:0000412!1.74e-28!12;CL:0000182!1.74e-28!12;CL:0000819!1.33e-10!1;CL:0000223!3.06e-07!59 | |ontology_enrichment_celltype=CL:0000181!1.74e-28!12;CL:0000417!1.74e-28!12;CL:0000668!1.74e-28!12;CL:0000414!1.74e-28!12;CL:0000412!1.74e-28!12;CL:0000182!1.74e-28!12;CL:0000819!1.33e-10!1;CL:0000223!3.06e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.99e-19;12!CL:0000047;1.37e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.73e-19,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.06e-10;11!UBERON:0009497;1.26e-08;13 | |||
|ontology_enrichment_disease=DOID:0050619!1.10e-10!1;DOID:1357!1.10e-10!1;DOID:0060073!1.33e-10!1;DOID:8675!1.33e-10!1 | |ontology_enrichment_disease=DOID:0050619!1.10e-10!1;DOID:1357!1.10e-10!1;DOID:0060073!1.33e-10!1;DOID:8675!1.33e-10!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.43e-31!19;UBERON:0006925!1.43e-31!19;UBERON:0008836!1.43e-31!19;UBERON:0009497!4.99e-30!25;UBERON:0000015!4.99e-30!25;UBERON:0002423!4.99e-30!25;UBERON:0006235!4.99e-30!25;UBERON:0004161!4.99e-30!25;UBERON:0008835!3.79e-27!22;UBERON:0003894!3.79e-27!22;UBERON:0009854!6.27e-26!23;UBERON:0007499!8.78e-24!25;UBERON:0005057!7.82e-23!26;UBERON:0009856!7.82e-23!26;UBERON:0002365!5.31e-19!31;UBERON:0002330!5.31e-19!31;UBERON:0002368!1.01e-16!35;UBERON:0003929!2.53e-16!54;UBERON:0005172!4.90e-16!55;UBERON:0005173!4.90e-16!55;UBERON:0002417!2.57e-14!61;UBERON:0000916!2.57e-14!61;UBERON:0000949!8.62e-13!45;UBERON:0001764!1.10e-10!1;UBERON:0001825!1.10e-10!1;UBERON:0005911!3.01e-10!82;UBERON:0002530!1.61e-09!59;UBERON:0005177!3.61e-09!107;UBERON:0004921!3.20e-07!129;UBERON:0004185!3.20e-07!129;UBERON:0009569!4.80e-07!113;UBERON:0001007!6.18e-07!155;UBERON:0001555!6.18e-07!155;UBERON:0007026!6.18e-07!155 | |ontology_enrichment_uberon=UBERON:0002107!1.43e-31!19;UBERON:0006925!1.43e-31!19;UBERON:0008836!1.43e-31!19;UBERON:0009497!4.99e-30!25;UBERON:0000015!4.99e-30!25;UBERON:0002423!4.99e-30!25;UBERON:0006235!4.99e-30!25;UBERON:0004161!4.99e-30!25;UBERON:0008835!3.79e-27!22;UBERON:0003894!3.79e-27!22;UBERON:0009854!6.27e-26!23;UBERON:0007499!8.78e-24!25;UBERON:0005057!7.82e-23!26;UBERON:0009856!7.82e-23!26;UBERON:0002365!5.31e-19!31;UBERON:0002330!5.31e-19!31;UBERON:0002368!1.01e-16!35;UBERON:0003929!2.53e-16!54;UBERON:0005172!4.90e-16!55;UBERON:0005173!4.90e-16!55;UBERON:0002417!2.57e-14!61;UBERON:0000916!2.57e-14!61;UBERON:0000949!8.62e-13!45;UBERON:0001764!1.10e-10!1;UBERON:0001825!1.10e-10!1;UBERON:0005911!3.01e-10!82;UBERON:0002530!1.61e-09!59;UBERON:0005177!3.61e-09!107;UBERON:0004921!3.20e-07!129;UBERON:0004185!3.20e-07!129;UBERON:0009569!4.80e-07!113;UBERON:0001007!6.18e-07!155;UBERON:0001555!6.18e-07!155;UBERON:0007026!6.18e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.02e-32;19!UBERON:0006925;1.02e-32;19!UBERON:0002423;5.64e-25;25!UBERON:0002365;3.66e-20;31!UBERON:0002330;3.66e-20;31!UBERON:0002368;2.00e-17;33!UBERON:0000949;1.14e-12;43!UBERON:0005172;3.62e-09;52!UBERON:0005173;3.62e-09;52!UBERON:0002417;4.08e-07;58!UBERON:0000916;4.08e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.21e-33,19;UBERON:0006925,9.21e-33,19;UBERON:0008836,9.21e-33,19;UBERON:0008835,2.33e-28,22;UBERON:0003894,2.33e-28,22;UBERON:0009854,3.82e-27,23;UBERON:0007499,5.23e-25,25;UBERON:0009497,5.23e-25,25;UBERON:0000015,5.23e-25,25;UBERON:0002423,5.23e-25,25;UBERON:0006235,5.23e-25,25;UBERON:0004161,5.23e-25,25;UBERON:0009856,4.62e-24,26;UBERON:0002365,3.03e-20,31;UBERON:0002330,3.03e-20,31;UBERON:0002368,5.68e-18,35;UBERON:0000949,4.76e-14,45;UBERON:0003929,9.42e-12,54;UBERON:0005172,9.42e-12,54;UBERON:0005173,9.42e-12,54;UBERON:0002530,8.91e-11,59;UBERON:0002417,1.34e-10,60;UBERON:0000916,1.34e-10,60;UBERON:0005911,8.31e-08,82;UBERON:0001041,2.29e-07,87 | |||
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|short_description=p8@PAH | |short_description=p8@PAH | ||
}} | }} |
Latest revision as of 21:41, 15 September 2015
Short description: | p8@PAH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_PAH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -44bp_to_S61296_5end |
EntrezGene: | PAH |
HGNC: | 8582 |
UniProt: | P00439 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.73e-19 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 9.21e-33 | 19 |
digestive gland | 9.21e-33 | 19 |
liver bud | 9.21e-33 | 19 |
hepatic diverticulum | 2.33e-28 | 22 |
liver primordium | 2.33e-28 | 22 |
digestive tract diverticulum | 3.82e-27 | 23 |
epithelial sac | 5.23e-25 | 25 |
epithelium of foregut-midgut junction | 5.23e-25 | 25 |
anatomical boundary | 5.23e-25 | 25 |
hepatobiliary system | 5.23e-25 | 25 |
foregut-midgut junction | 5.23e-25 | 25 |
septum transversum | 5.23e-25 | 25 |
sac | 4.62e-24 | 26 |
exocrine gland | 3.03e-20 | 31 |
exocrine system | 3.03e-20 | 31 |
endocrine gland | 5.68e-18 | 35 |
endocrine system | 4.76e-14 | 45 |
gut epithelium | 9.42e-12 | 54 |
abdomen element | 9.42e-12 | 54 |
abdominal segment element | 9.42e-12 | 54 |
gland | 8.91e-11 | 59 |
abdominal segment of trunk | 1.34e-10 | 60 |
abdomen | 1.34e-10 | 60 |
endo-epithelium | 8.31e-08 | 82 |
foregut | 2.29e-07 | 87 |