FFCP PHASE1:Hg19::chrX:49593853..49593872,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9506 | |EntrezGene=9506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4108 | |HGNC=4108 | ||
|TSSclassifier=strong | |||
|UniProt=O60829 | |UniProt=O60829 | ||
|association_with_transcript=0bp_to_ENST00000376141_5end | |||
|cluster_id=chrX:49593853..49593872,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_3_at_PAGE4_5end | |||
|id=chrX:49593853..49593872,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.23e-15!3;CL:0002322!2.57e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0002541;7.56e-47;3!CL:0000349;6.02e-08;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.56e-47,3;CL:0000349,6.02e-08,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;5.98e-17;1!UBERON:0007297;5.49e-09;2 | |||
|ontology_enrichment_disease=DOID:1036!3.65e-09!8 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!2.23e-15!3;UBERON:0000920!2.23e-15!3;UBERON:0003124!2.03e-11!7;UBERON:0005631!2.24e-08!14;UBERON:0000158!2.24e-08!14;UBERON:0006947!2.48e-07!3;UBERON:0004054!2.48e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.56e-47;3!UBERON:0000920;7.56e-47;3!UBERON:0006947;3.63e-21;3!UBERON:0004054;3.63e-21;3!UBERON:0001301;1.21e-16;1!UBERON:0001000;2.25e-16;1!UBERON:0005352;2.25e-16;1!UBERON:0005904;3.87e-16;4!UBERON:0005631;1.41e-14;10!UBERON:0000158;1.41e-14;10!UBERON:0000478;1.17e-10;24!UBERON:0000058;5.26e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.56e-47,3;UBERON:0003124,1.27e-35,7;UBERON:0006947,4.02e-21,3;UBERON:0004054,4.02e-21,3;UBERON:0005631,4.94e-18,14;UBERON:0000158,4.94e-18,14;UBERON:0001301,1.41e-16,1;UBERON:0001000,2.25e-16,1;UBERON:0005352,2.25e-16,1;UBERON:0005904,4.18e-16,4;UBERON:0000478,1.18e-10,24 | |||
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| ||
|short_description=p3@PAGE4 | |||
}} | }} |
Latest revision as of 22:04, 15 September 2015
Short description: | p3@PAGE4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PAGE4_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_ENST00000376141_5end |
EntrezGene: | PAGE4 |
HGNC: | 4108 |
UniProt: | O60829 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.56e-47 | 3 |
extraembryonic cell | 6.02e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.56e-47 | 3 |
chorion | 1.27e-35 | 7 |
male genital duct | 4.02e-21 | 3 |
internal male genitalia | 4.02e-21 | 3 |
extraembryonic membrane | 4.94e-18 | 14 |
membranous layer | 4.94e-18 | 14 |
epididymis | 1.41e-16 | 1 |
vas deferens | 2.25e-16 | 1 |
spermatic cord | 2.25e-16 | 1 |
duct of male reproductive system | 4.18e-16 | 4 |
extraembryonic structure | 1.18e-10 | 24 |