FFCP PHASE1:Hg19::chr1:224716846..224716914,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149111 | |EntrezGene=149111 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26802 | |HGNC=26802 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000478120,ENST00000498382_5end | |association_with_transcript=0bp_to_ENST00000478120,ENST00000498382_5end | ||
|cluster_id=chr1:224716846..224716914,+ | |||
|coexpression_cluster_id=C479 | |||
|description=CAGE_peak_4_at_CNIH3_5end | |description=CAGE_peak_4_at_CNIH3_5end | ||
|id=chr1:224716846..224716914,+ | |id=chr1:224716846..224716914,+ | ||
|ontology_enrichment_celltype=CL:0000055!3.23e-13!180;CL:0000548!5.84e-10!679;CL:0000004!5.84e-10!679;CL:0000255!5.84e-10!679;CL:0000012!1.13e-09!682;CL:0002321!2.79e-08!248;CL:0000220!3.35e-08!246;CL:0000003!1.33e-07!722;CL:0000144!1.92e-07!625;CL:0000057!3.64e-07!75;CL:0002551!4.06e-07!6 | |ontology_enrichment_celltype=CL:0000055!3.23e-13!180;CL:0000548!5.84e-10!679;CL:0000004!5.84e-10!679;CL:0000255!5.84e-10!679;CL:0000012!1.13e-09!682;CL:0002321!2.79e-08!248;CL:0000220!3.35e-08!246;CL:0000003!1.33e-07!722;CL:0000144!1.92e-07!625;CL:0000057!3.64e-07!75;CL:0002551!4.06e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002551;2.15e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,9.04e-08,41;CL:0002551,1.58e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.68e-10!14;DOID:120!6.38e-08!27;DOID:193!5.14e-07!29 | |ontology_enrichment_disease=DOID:2394!2.68e-10!14;DOID:120!6.38e-08!27;DOID:193!5.14e-07!29 | ||
|ontology_enrichment_disease_v019=DOID:2394;7.89e-15;14!DOID:120;1.57e-10;27!DOID:193;1.24e-09;29 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.65e-15,14;DOID:120,1.77e-10,27;DOID:193,1.39e-09,29 | |||
|ontology_enrichment_uberon=UBERON:0000914!2.92e-09!83;UBERON:0002329!2.92e-09!83;UBERON:0003077!2.92e-09!83;UBERON:0003059!2.92e-09!83;UBERON:0007282!2.92e-09!83;UBERON:0009618!2.92e-09!83;UBERON:0007285!2.92e-09!83;UBERON:0004290!9.81e-08!70;UBERON:0000992!1.15e-07!13;UBERON:0000486!1.17e-07!82 | |ontology_enrichment_uberon=UBERON:0000914!2.92e-09!83;UBERON:0002329!2.92e-09!83;UBERON:0003077!2.92e-09!83;UBERON:0003059!2.92e-09!83;UBERON:0007282!2.92e-09!83;UBERON:0009618!2.92e-09!83;UBERON:0007285!2.92e-09!83;UBERON:0004290!9.81e-08!70;UBERON:0000992!1.15e-07!13;UBERON:0000486!1.17e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0000992;7.00e-10;13!UBERON:0002118;2.41e-09;5!UBERON:0000991;1.76e-07;21!UBERON:0002067;2.51e-07;9!UBERON:0002119;4.10e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000992,7.33e-10,13;UBERON:0002118,2.73e-09,5;UBERON:0000991,1.82e-07,21;UBERON:0009196,1.82e-07,21;UBERON:0009117,1.82e-07,21;UBERON:0005564,1.82e-07,21;UBERON:0002067,1.88e-07,9;UBERON:0004016,1.88e-07,9;UBERON:0010083,1.88e-07,9;UBERON:0002119,3.91e-07,4;UBERON:0004176,4.62e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,2.6893005858071,1.80808358407193,3.65155045193687,4.39139518911456,0.246242116153576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.189069634328136,0.665188192387692,0,0,0,0,1.62273696827342,1.39303789839414,0.132957960518865,0,0,0,0.596287222100115,0,0,0,0,0,0.417989933073621,0.516833518338658,0.71153252537342,0,0.402829317109147,0,0.488124115096339,0,0,0.357198913136319,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,1.72131935057184,0.286836620748814,0,0,0,0,0,0.404132016209064,0,0.151357427644931,0,0.234321431833797,6.55536161343673,1.71141546463335,0.896692083310806,0.939475989150119,1.78060238804945,2.24721290723598,2.24569588380383,3.93069815397658,0.413303124703062,0,0,1.82032272387605,0,4.54507507675979,3.62843707628696,0.554128230968366,0.438977620880838,0,0.150238058906597,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0,0,0,0.168776332241266,0,0,0.184099797284599,0,0,0.302256294682921,0.169560592310488,0.57978255948989,0.272746120590835,0.286804595389004,0.121973706129595,0,0,0.829288440122964,0,0.36497735907583,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0,0,0,0,0.858486162094873,0,0.702012795417713,0.148631162288728,0.93733833986777,0,0.283550194484773,0,0,0.383382679165211,0,0,0,0,0,1.71444314588856,3.4378958300245,0,0,0.616964956219941,3.30377363628309,0.571652865261156,0.448524337381443,0,0.36669142910475,2.06834745212444,0,4.22651376278,0,0,0,0,0,0,0,0,2.28015329005615,0,0,2.41151501647669,3.48613383440118,0.899756920638513,1.2162378064119,0,0,0,0,0,0.144781306667579,0.205476322550383,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542530047399471,0,0,0,0.117141414992713,0,0,0,0,0,1.04260337361699,0.195801157462741,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,2.31314540703983,0,0.574890092096664,1.03850885836724,0.581051892299796,0.120859449591622,0,0,0,0.182091168006717,0,0,0.385076685522074,0,0,0.211103257785751,0,0.170093705276516,0,0,0.270946437543853,0,0,0,0.447749509444357,0,0,3.07740150139667,0.984043937099117,0.325378394664303,0,0,0,0,0,0,1.35339005608971,0.616194468458578,0.767518373630648,1.10269257987624,0.214840489736547,0,1.10794615640931,1.33548053470106,0,0,0,0,0,0,0.6970372701606,0.616067160352178,0,0,0.55597265731176,0.143124886741991,0.372158369359667,0.632758849437452,0,0,0,0.318203247925937,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0,1.13008116620243,0,0,0,0,0,0.811641507850816,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0.75894634753143,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0.33307196799782,0,0,0,0,0,0.284136146806413,0,0,0,0,0,4.34103949589333,0,0,0,0,0,1.63629892003448,0,0,0.808815160325942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6475681990171,0,0,0,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18502341580683,0,0,0,0,1.05226393590145,0.207376382794494,0.664653872707185,0,0.313932918407225,0,0.284609546029793,0.277349346026277,0,0,0,0,0,0,0,0,0,0,0,0.822251547880505,5.7627237393867,0,0,1.36269994427607,0,0.19980960958213,0,0,1.71594997861965,0.720273989940749,0,0,4.48483880042926,6.79918501030166,0,5.20111061822734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0.0984274815147488,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0.105600336519406,0,0,0,0,0,0,0,0.653174720218818,0,0,1.02232813071253,0.339936274560377,0,0,0,0.26446520348538,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0.110929051536852,0,0,0,14.8616135190815,0,4.9405822136616,0,0,1.34329322598187,0.467426619694449,1.10961172300523,0.568209015825267,1.76097531226803,0.889811221596536,0.457680136793847,1.36107831386915,0.310874401165561,2.51353754982378,3.34523211043775,6.29724357029046,2.79473322377267,0.829412415681711,1.32920857278997,4.17396049449387,0.751288044986092,0.380805212168795,3.25496586563729,3.27327586564607,8.59284456339908,1.39210127963548,0,0,0,0.336749488765919,0,0,0,0,0.453411851024545,0.463044948647668,0,0,0.308801447160972,0.438568099157414,0,0.192914038270915,0.675769762612291,0,0,0,0,0,0,0,0,1.72041036127604,0.845248493434508,0,0,0,0,2.94569520402945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0.294443155503077,0,0,0.115525666150338,0,3.4517996303005,0.198916222116275,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,150.394984276616,0,0,0.118193840883968,0.222462803784138,0,0,0.280272163313789,0,0.431855182437243,0,0.0714765441766563,0,0,0,0,0,0,0,0,1.65664801022791,2.8120423570522,0,0,13.3388745835658,5.7332336338646,0,0.098150233615243,0,0,0,0,0,0,0,0,0,0,0.754814217833368,0,0,0,0,0,0.196308467114945,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| ||
|short_description=p4@CNIH3 | |short_description=p4@CNIH3 | ||
}} | }} |
Latest revision as of 23:35, 15 September 2015
Short description: | p4@CNIH3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CNIH3_5end |
Coexpression cluster: | C479_pleomorphic_mesothelioma_cholangiocellular_melanoma_Saos2_serous_glioblastoma |
Association with transcript: | 0bp_to_ENST00000478120, ENST00000498382_5end |
EntrezGene: | CNIH3 |
HGNC: | 26802 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 9.04e-08 | 41 |
fibroblast of dermis | 1.58e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
female gonad | 7.33e-10 | 13 |
right ovary | 2.73e-09 | 5 |
gonad | 1.82e-07 | 21 |
indifferent external genitalia | 1.82e-07 | 21 |
indifferent gonad | 1.82e-07 | 21 |
gonad primordium | 1.82e-07 | 21 |
dermis | 1.88e-07 | 9 |
dermatome | 1.88e-07 | 9 |
future dermis | 1.88e-07 | 9 |
left ovary | 3.91e-07 | 4 |
external genitalia | 4.62e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.65e-15 | 14 |
female reproductive organ cancer | 1.77e-10 | 27 |
reproductive organ cancer | 1.39e-09 | 29 |