FFCP PHASE1:Hg19::chr3:150481132..150481151,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6478 | |EntrezGene=6478 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10858 | |HGNC=10858 | ||
|TSSclassifier=strong | |||
|UniProt=O43255 | |UniProt=O43255 | ||
|association_with_transcript=12bp_to_ENST00000312960_5end | |association_with_transcript=12bp_to_ENST00000312960_5end | ||
|cluster_id=chr3:150481132..150481151,- | |||
|description=CAGE_peak_5_at_SIAH2_5end | |description=CAGE_peak_5_at_SIAH2_5end | ||
|id=chr3:150481132..150481151,- | |id=chr3:150481132..150481151,- | ||
|ontology_enrichment_celltype=CL:0002057!3.75e-08!42;CL:0000860!1.06e-07!45 | |ontology_enrichment_celltype=CL:0002057!3.75e-08!42;CL:0000860!1.06e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000764;2.53e-07;2!CL:0000558;2.53e-07;2 | |ontology_enrichment_celltype_v019=CL:0000764;2.53e-07;2!CL:0000558;2.53e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000764,2.70e-07,2;CL:0000765,2.70e-07,2;CL:0000050,2.70e-07,2;CL:0000038,2.70e-07,2;CL:0000558,2.70e-07,2;CL:0000547,2.70e-07,2;CL:0000549,2.70e-07,2;CL:0000550,2.70e-07,2;CL:0000552,2.70e-07,2;CL:0000575,9.71e-07,2 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;1.34e-07;4!DOID:1612;1.34e-07;4 | |ontology_enrichment_disease_v019=DOID:5093;1.34e-07;4!DOID:1612;1.34e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:5093,1.47e-07,4;DOID:1612,1.47e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.46e-07!102;UBERON:0003061!2.46e-07!102 | |ontology_enrichment_uberon=UBERON:0002390!2.46e-07!102;UBERON:0003061!2.46e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.17e-08;24!UBERON:0000178;3.14e-08;15!UBERON:0000179;3.14e-08;15!UBERON:0000463;3.14e-08;15!UBERON:0005904;3.72e-07;4!UBERON:0002390;7.50e-07;32!UBERON:0002107;9.87e-07;19!UBERON:0006925;9.87e-07;19 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.17e-08;24!UBERON:0000178;3.14e-08;15!UBERON:0000179;3.14e-08;15!UBERON:0000463;3.14e-08;15!UBERON:0005904;3.72e-07;4!UBERON:0002390;7.50e-07;32!UBERON:0002107;9.87e-07;19!UBERON:0006925;9.87e-07;19 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.18e-08,24;UBERON:0000178,2.33e-08,15;UBERON:0000179,2.33e-08,15;UBERON:0000463,2.33e-08,15;UBERON:0005904,3.28e-07,4;UBERON:0002390,9.14e-07,98;UBERON:0003061,9.14e-07,98;UBERON:0002107,9.41e-07,19;UBERON:0006925,9.41e-07,19;UBERON:0008836,9.41e-07,19 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.982935746006035,0.697801167972428,0.873765488520689,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0,0.305653622991805,0.246301768349837,0.0787107813136792,0,0,0,0.919421224478927,1.8072355126695,0.369754010166788,0.232401601740905,0.142169232487422,0,0.553995408531877,0.401088894940283,0.434021741431704,0.671746422719773,0.32389366601898,0,0.145398238779565,0,0,0.232429036905685,0,1.23882548358041,0.575384784644301,0.256160706529101,0.945928919554341,0.689491361473237,1.29096936716765,2.70852973188684,0.188242339542605,0.272906150057846,0.674170453335254,0.612167784741805,0.320929027076094,1.91801137739712,0.989553900560148,0.199463657621632,0,4.93355705668593,1.70215567407342,8.09668923694247,0.251248665256743,0,0.217188844705117,5.44859552370032,4.41933163185078,4.1140110367315,0,0.425208599930087,0,0,0.300353785683013,0.16072558669708,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0.954053754535364,0,0,0.382273228125229,0,0,0.263384084775077,0,0.786021525498329,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0,0.523916301990851,2.18577172975525,1.48313777113772,0,0,0,0.238490624305342,0,0,0,0.860234595106124,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0.367663080345869,0.81014194788176,0,0,0,1.53316637465883,0,0,0,0,0.872188104285069,0,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.250237039743928,0,0,0,0,0.226864366320042,0,0.427114777637135,0,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0,0,0.184099797284599,0,0.355009592516614,0.201504196455281,0,0.386521706326594,0.272746120590835,0.286804595389004,0,0,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0.236613600079688,0.168584690078102,0,0.110293972732394,0.217879444092406,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,0.738155454624648,1.40241773803446,0,0,0,0,8.27105869353966,0,0.122988438543114,0,1.20725313949488,0,0.100528972411631,0.185176890317059,0,0,0,0,0,0,0.925971025153221,0,3.95102198979638,3.43394464837949,0,0,0,0,0.503946384596579,0.283550194484773,0.0895585227028483,0,0,0.492663237895943,0,0,0.288239906833923,0.12624243342638,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.531876233169741,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0.205476322550383,0,0.112085143993527,0,0,0.128343036279748,0,0,0,0,0,0,2.99161459204025,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0.320182673410333,0.303127571446259,0,1.20956117331872,0.248107807818777,0.153461973288062,0,0.384417447767103,0.511707249066704,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0.519254429183621,0,0.725156697549733,1.40354529212299,0.276242966807689,0.114814448164607,0,0,0,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0.254876273045038,0,0,3.50815802633495,3.39866086332371,0,0,0,1.44257416306811,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0.356128142586949,0.330569830721956,0.768760269460425,0.510450849978337,0.30347334256665,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0.78494864019923,0.179872457583315,0,0,0,0,0,1.46290121726877,0,0,0,0.282810863907425,0,0.551365343546124,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0,0,0,0.7133421029625,0,0,0,0.75894634753143,0,0.192444225451024,0,0,1.50630081242847,2.15252686335615,0,0.886860307073351,0,1.52234282769651,1.52927441428475,1.70894156152249,0,0.411362273086194,0.648473311192717,1.08006287447623,0,0.213648142254946,0,0,0.929015875628594,0,0.640276590135727,0.159426272728822,0.199579371432817,0,0,0,0,0,0,2.50634477090067,0.169291777801603,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,1.23087398947712,0.540911356951966,0,1.4098700508785,0,0,0,0,0,6.92359005739301,0.296964680832639,9.52198176507619,0,0,0.111308705022906,0.16480387422676,0,0.398495976502139,0.276283915531148,0,0,5.6619010512092,0.622079175323615,0,0.358042349351218,0.511572370226872,0.789147245095469,0,1.11136990144637,0,0,0,2.08342208868187,0,1.44999915086959,0.227586896570999,0,0,0,0.291604613383254,0,0,0,0,0,0.295547618953547,0,0.10893846351899,1.11538995422883,2.84715956464049,0,0.46112780877612,0.628303510868405,8.36584763799462,2.23300811812344,0.274792780205587,0,1.02193298195737,0.156980256395025,0,0.676786981851542,0.588187602953219,0.503464760927528,0,0.635746315921515,0,0.163232808159148,0.282706142867882,0,0.995261931078505,0.265372693510018,0,7.70954934569617,1.60633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| ||
|short_description=p5@SIAH2 | |short_description=p5@SIAH2 | ||
}} | }} |
Latest revision as of 00:14, 16 September 2015
Short description: | p5@SIAH2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SIAH2_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_ENST00000312960_5end |
EntrezGene: | SIAH2 |
HGNC: | 10858 |
UniProt: | O43255 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 2.70e-07 | 2 |
erythroblast | 2.70e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 2.70e-07 | 2 |
erythroid progenitor cell | 2.70e-07 | 2 |
reticulocyte | 2.70e-07 | 2 |
proerythroblast | 2.70e-07 | 2 |
basophilic erythroblast | 2.70e-07 | 2 |
polychromatophilic erythroblast | 2.70e-07 | 2 |
orthochromatic erythroblast | 2.70e-07 | 2 |
corneal epithelial cell | 9.71e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.18e-08 | 24 |
blood | 2.33e-08 | 15 |
haemolymphatic fluid | 2.33e-08 | 15 |
organism substance | 2.33e-08 | 15 |
duct of male reproductive system | 3.28e-07 | 4 |
hematopoietic system | 9.14e-07 | 98 |
blood island | 9.14e-07 | 98 |
liver | 9.41e-07 | 19 |
digestive gland | 9.41e-07 | 19 |
liver bud | 9.41e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.47e-07 | 4 |
breast cancer | 1.47e-07 | 4 |