FFCP PHASE1:Hg19::chr16:2880215..2880240,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:2880215..2880240,+ to FFCP PHASE1:Hg19::chr16:2880215..2880240,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124220 | |EntrezGene=124220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30456 | |HGNC=30456 | ||
|TSSclassifier=strong | |||
|UniProt=Q96DA0 | |UniProt=Q96DA0 | ||
|association_with_transcript=42bp_to_NM_145252,uc002cru.2_5end | |||
|cluster_id=chr16:2880215..2880240,+ | |||
|description=CAGE_peak_3_at_ZG16B_5end | |||
|id=chr16:2880215..2880240,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.01e-17!65;CL:0002194!1.42e-17!63;CL:0000576!1.42e-17!63;CL:0000040!1.42e-17!63;CL:0000559!1.42e-17!63;CL:0000557!7.90e-17!71;CL:0000839!4.49e-15!70;CL:0000763!1.81e-14!112;CL:0000049!1.81e-14!112;CL:0000766!1.19e-13!76;CL:0002057!1.22e-13!42;CL:0000860!4.72e-12!45;CL:0000988!7.91e-10!182;CL:0000037!4.31e-09!172;CL:0000566!4.31e-09!172;CL:0002087!6.47e-09!119;CL:0002032!1.82e-08!165;CL:0000837!1.82e-08!165;CL:0000738!4.56e-08!140;CL:0002031!1.38e-07!124;CL:0002393!4.62e-07!9;CL:0002397!4.62e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.97e-10;6!CL:0000244;4.12e-09;4!CL:0000731;4.12e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.23e-10,6;CL:0000244,4.02e-09,4;CL:0000731,4.02e-09,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;1.45e-09;4!DOID:1612;1.45e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.64e-09,4;DOID:1612,1.64e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.76e-18!102;UBERON:0003061!1.76e-18!102;UBERON:0002193!1.10e-17!112;UBERON:0002371!3.31e-15!80;UBERON:0001474!4.51e-13!86;UBERON:0002405!1.19e-12!115;UBERON:0004765!4.44e-10!101;UBERON:0001434!4.44e-10!101;UBERON:0003081!1.99e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;1.32e-10;6!UBERON:0003293;1.32e-10;6!UBERON:0003294;1.32e-10;6!UBERON:0010047;1.32e-10;6!UBERON:0003408;1.32e-10;6!UBERON:0000167;1.32e-10;6!UBERON:0001829;5.48e-09;2!UBERON:0000365;2.29e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,1.33e-10,6;UBERON:0003293,1.33e-10,6;UBERON:0003294,1.33e-10,6;UBERON:0010047,1.33e-10,6;UBERON:0000167,1.33e-10,6;UBERON:0001829,5.09e-09,2;UBERON:0000365,2.25e-07,5 | |||
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| ||
|short_description=p3@ZG16B | |||
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Latest revision as of 00:42, 16 September 2015
Short description: | p3@ZG16B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZG16B_5end |
Coexpression cluster: | NA |
Association with transcript: | 42bp_to_NM_145252, uc002cru.2_5end |
EntrezGene: | ZG16B |
HGNC: | 30456 |
UniProt: | Q96DA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.23e-10 | 6 |
transitional epithelial cell | 4.02e-09 | 4 |
urothelial cell | 4.02e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 1.33e-10 | 6 |
gland of oral region | 1.33e-10 | 6 |
gland of foregut | 1.33e-10 | 6 |
oral gland | 1.33e-10 | 6 |
oral cavity | 1.33e-10 | 6 |
major salivary gland | 5.09e-09 | 2 |
urothelium | 2.25e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.64e-09 | 4 |
breast cancer | 1.64e-09 | 4 |