FFCP PHASE1:Hg19::chr14:75469606..75469690,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8892 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3258 | |||
|TSSclassifier=strong | |||
|UniProt=P49770,G3V5E5,Q53XC2 | |||
|association_with_transcript=0bp_to_ENST00000266126,ENST00000553539,ENST00000555522,ENST00000556028,NM_014239,uc001xrc.1_5end | |||
|cluster_id=chr14:75469606..75469690,+ | |||
|description=CAGE_peak_1_at_EIF2B2_5end | |||
|id=chr14:75469606..75469690,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.09e-17!254;CL:0002139!4.49e-16!24;CL:0000071!6.26e-13!18;CL:0002546!6.26e-13!18;CL:0002321!1.03e-12!248;CL:0000220!1.35e-12!246;CL:0000222!5.41e-09!119;CL:0000115!1.36e-08!35;CL:0000076!1.22e-07!62;CL:1000413!1.86e-07!9;CL:0002078!3.68e-07!44 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.20e-16;24!CL:0000071;5.91e-13;18!CL:0000115;8.97e-08;36!CL:1000413;1.84e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,7.91e-18,253;CL:0002139,4.49e-16,24;CL:0000071,6.26e-13,18;CL:0002546,6.26e-13,18;CL:0002321,1.24e-12,250;CL:0000115,5.98e-09,36;CL:0000222,7.33e-09,121;CL:0002078,1.76e-07,45;CL:1000413,1.86e-07,9;CL:0000076,3.45e-07,63;CL:0000213,5.94e-07,58;CL:0000215,5.94e-07,58 | |||
|ontology_enrichment_development_v019=CL:0002546;5.91e-13;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!6.26e-13!18;UBERON:0004638!6.26e-13!18;UBERON:0004852!6.26e-13!18;UBERON:0000487!2.91e-11!22;UBERON:0006914!1.96e-10!25;UBERON:0000490!7.37e-10!138;UBERON:0000055!2.91e-09!69;UBERON:0002049!7.35e-09!79;UBERON:0007798!7.35e-09!79;UBERON:0001981!3.35e-08!60;UBERON:0007500!3.35e-08!60;UBERON:0004537!3.35e-08!60;UBERON:0006965!3.35e-08!60;UBERON:0004872!1.21e-07!84;UBERON:0003915!1.86e-07!9;UBERON:0004700!1.86e-07!9;UBERON:0001917!1.86e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;5.91e-13;18!UBERON:0001986;5.91e-13;18!UBERON:0004852;5.91e-13;18!UBERON:0000487;2.84e-11;22!UBERON:0000490;4.32e-11;33!UBERON:0006914;1.74e-10;25!UBERON:0003915;1.84e-07;9!UBERON:0004700;1.84e-07;9!UBERON:0001917;1.84e-07;9!UBERON:0000055;8.32e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.26e-13,18;UBERON:0001986,6.26e-13,18;UBERON:0004852,6.26e-13,18;UBERON:0000487,2.91e-11,22;UBERON:0006914,1.96e-10,25;UBERON:0000055,8.65e-10,68;UBERON:0000490,8.77e-10,148;UBERON:0002049,2.48e-09,78;UBERON:0007798,2.48e-09,78;UBERON:0007500,9.96e-09,59;UBERON:0001981,9.96e-09,59;UBERON:0004537,9.96e-09,59;UBERON:0006965,9.96e-09,59;UBERON:0004872,4.67e-08,83;UBERON:0003915,1.86e-07,9;UBERON:0004700,1.86e-07,9;UBERON:0001917,1.86e-07,9 | |||
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| |||
|short_description=p1@EIF2B2 | |||
}} |
Latest revision as of 01:59, 16 September 2015
Short description: | p1@EIF2B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EIF2B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000266126, ENST00000553539, ENST00000555522, ENST00000556028, NM_014239, uc001xrc.1_5end |
EntrezGene: | EIF2B2 |
HGNC: | 3258 |
UniProt: | P49770G3V5E5Q53XC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 7.91e-18 | 253 |
endothelial cell of vascular tree | 4.49e-16 | 24 |
blood vessel endothelial cell | 6.26e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.26e-13 | 18 |
embryonic cell | 1.24e-12 | 250 |
endothelial cell | 5.98e-09 | 36 |
mesodermal cell | 7.33e-09 | 121 |
meso-epithelial cell | 1.76e-07 | 45 |
endothelial cell of artery | 1.86e-07 | 9 |
squamous epithelial cell | 3.45e-07 | 63 |
lining cell | 5.94e-07 | 58 |
barrier cell | 5.94e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 6.26e-13 | 18 |
endothelium | 6.26e-13 | 18 |
cardiovascular system endothelium | 6.26e-13 | 18 |
simple squamous epithelium | 2.91e-11 | 22 |
squamous epithelium | 1.96e-10 | 25 |
vessel | 8.65e-10 | 68 |
unilaminar epithelium | 8.77e-10 | 148 |
vasculature | 2.48e-09 | 78 |
vascular system | 2.48e-09 | 78 |
epithelial tube open at both ends | 9.96e-09 | 59 |
blood vessel | 9.96e-09 | 59 |
blood vasculature | 9.96e-09 | 59 |
vascular cord | 9.96e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 4.67e-08 | 83 |
endothelial tube | 1.86e-07 | 9 |
arterial system endothelium | 1.86e-07 | 9 |
endothelium of artery | 1.86e-07 | 9 |