FFCP PHASE1:Hg19::chr17:48450575..48450618,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=146956 | |EntrezGene=146956 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24965 | |HGNC=24965 | ||
|TSSclassifier=strong | |||
|UniProt=Q96AY2,F8W714,D6RIT8 | |UniProt=Q96AY2,F8W714,D6RIT8 | ||
|association_with_transcript=0bp_to_ENST00000338165,ENST00000393271,ENST00000510007,ENST00000511519,ENST00000511711,NM_001166131,NM_152463,uc002iqs.1_5end | |association_with_transcript=0bp_to_ENST00000338165,ENST00000393271,ENST00000510007,ENST00000511519,ENST00000511711,NM_001166131,NM_152463,uc002iqs.1_5end | ||
|cluster_id=chr17:48450575..48450618,+ | |||
|coexpression_cluster_id=C109 | |coexpression_cluster_id=C109 | ||
|description=CAGE_peak_1_at_EME1_5end | |description=CAGE_peak_1_at_EME1_5end | ||
|id=chr17:48450575..48450618,+ | |id=chr17:48450575..48450618,+ | ||
|ontology_enrichment_celltype=CL:0000548!2.62e-13!679;CL:0000004!2.62e-13!679;CL:0000255!2.62e-13!679;CL:0000012!3.01e-13!682;CL:0000066!1.26e-12!254;CL:0000333!6.50e-09!41;CL:0000003!2.21e-08!722;CL:0000133!8.72e-08!59;CL:0002319!1.88e-07!25 | |ontology_enrichment_celltype=CL:0000548!2.62e-13!679;CL:0000004!2.62e-13!679;CL:0000255!2.62e-13!679;CL:0000012!3.01e-13!682;CL:0000066!1.26e-12!254;CL:0000333!6.50e-09!41;CL:0000003!2.21e-08!722;CL:0000133!8.72e-08!59;CL:0002319!1.88e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0002319;2.70e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.35e-12,253;CL:0000333,3.87e-09,41;CL:0000133,1.52e-07,59;CL:0002319,2.71e-07,25 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.06e-56!235;DOID:14566!2.69e-56!239;DOID:0050687!1.02e-29!143;DOID:0050686!2.72e-26!137;DOID:305!6.60e-23!106;DOID:2531!7.78e-20!51;DOID:0060083!7.78e-20!51;DOID:1240!4.26e-16!39;DOID:8692!6.21e-12!31;DOID:7!2.91e-07!39 | |ontology_enrichment_disease=DOID:162!1.06e-56!235;DOID:14566!2.69e-56!239;DOID:0050687!1.02e-29!143;DOID:0050686!2.72e-26!137;DOID:305!6.60e-23!106;DOID:2531!7.78e-20!51;DOID:0060083!7.78e-20!51;DOID:1240!4.26e-16!39;DOID:8692!6.21e-12!31;DOID:7!2.91e-07!39 | ||
|ontology_enrichment_disease_v019=DOID:1240;1.09e-13;39!DOID:2531;2.03e-13;51!DOID:0060083;2.03e-13;51!DOID:8692;2.02e-12;31!DOID:0050687;3.71e-08;143!DOID:305;1.08e-07;106!DOID:14566;4.15e-07;239!DOID:162;7.74e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.67e-59,235;DOID:14566,2.97e-58,239;DOID:0050687,7.97e-31,143;DOID:0050686,7.93e-27,137;DOID:305,6.15e-24,106;DOID:2531,4.16e-21,51;DOID:0060083,4.16e-21,51;DOID:1240,4.16e-17,39;DOID:8692,1.18e-12,31;DOID:7,5.29e-08,39 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@EME1 | |short_description=p1@EME1 | ||
}} | }} |
Latest revision as of 02:07, 16 September 2015
Short description: | p1@EME1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EME1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000338165, ENST00000393271, ENST00000510007, ENST00000511519, ENST00000511711, NM_001166131, NM_152463, uc002iqs.1_5end |
EntrezGene: | EME1 |
HGNC: | 24965 |
UniProt: | Q96AY2F8W714D6RIT8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.35e-12 | 253 |
migratory neural crest cell | 3.87e-09 | 41 |
neurectodermal cell | 1.52e-07 | 59 |
neural cell | 2.71e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.67e-59 | 235 |
disease of cellular proliferation | 2.97e-58 | 239 |
cell type cancer | 7.97e-31 | 143 |
organ system cancer | 7.93e-27 | 137 |
carcinoma | 6.15e-24 | 106 |
hematologic cancer | 4.16e-21 | 51 |
immune system cancer | 4.16e-21 | 51 |
leukemia | 4.16e-17 | 39 |
myeloid leukemia | 1.18e-12 | 31 |
disease of anatomical entity | 5.29e-08 | 39 |