FFCP PHASE1:Hg19::chr2:103235775..103235794,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6549 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11072 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UBY0 | |||
|association_with_transcript=-371bp_to_ENST00000233969,NM_003048,uc002tca.2_5end | |||
|cluster_id=chr2:103235775..103235794,+ | |||
|description=CAGE_peak_2_at_SLC9A2_5end | |||
|id=chr2:103235775..103235794,+ | |||
|ontology_enrichment_celltype=CL:0000453!4.66e-08!5;CL:0000990!5.16e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000453;1.31e-11;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,1.38e-11,5;CL:0002563,9.76e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0006242;1.80e-07;1!UBERON:0001045;3.01e-07;1!UBERON:0008425;3.01e-07;1 | |||
|ontology_enrichment_disease=DOID:299!2.10e-11!25;DOID:305!3.82e-09!106 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.05e-13;4!DOID:1612;2.05e-13;4!DOID:0050619;3.01e-07;1!DOID:178;3.01e-07;1!DOID:326;3.01e-07;1!DOID:3978;3.01e-07;1!DOID:3394;3.01e-07;1!DOID:5844;3.01e-07;1!DOID:1357;3.01e-07;1!DOID:630;6.48e-07;1!DOID:0050177;6.48e-07;1!DOID:0050427;6.48e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,1.12e-13,4;DOID:1612,1.12e-13,4;DOID:0050619,2.67e-07,1;DOID:1357,2.67e-07,1;DOID:178,2.84e-07,1;DOID:326,2.84e-07,1;DOID:3978,2.84e-07,1;DOID:3394,2.84e-07,1;DOID:5844,2.84e-07,1;DOID:630,7.29e-07,1;DOID:0050177,7.29e-07,1;DOID:0050427,7.29e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.71e-19!115;UBERON:0001049!1.58e-11!57;UBERON:0005068!1.58e-11!57;UBERON:0006241!1.58e-11!57;UBERON:0007135!1.58e-11!57;UBERON:0001017!5.21e-10!82;UBERON:0005743!1.02e-09!86;UBERON:0000073!1.38e-08!94;UBERON:0001016!1.38e-08!94;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0002616!3.09e-08!59;UBERON:0002780!3.11e-08!41;UBERON:0001890!3.11e-08!41;UBERON:0006240!3.11e-08!41;UBERON:0003080!6.60e-08!42;UBERON:0001893!8.43e-08!34;UBERON:0002020!9.46e-08!34;UBERON:0003528!9.46e-08!34;UBERON:0002346!1.11e-07!90;UBERON:0000955!3.36e-07!69;UBERON:0006238!3.36e-07!69;UBERON:0002791!3.82e-07!33;UBERON:0001869!8.97e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;4.43e-19;22!UBERON:0001155;2.13e-16;9!UBERON:0000160;4.65e-15;17!UBERON:0000059;2.24e-13;11!UBERON:0004921;9.32e-12;33!UBERON:0002110;9.25e-09;3!UBERON:0002294;5.84e-08;7!UBERON:0001173;5.84e-08;7!UBERON:0001154;3.01e-07;1!UBERON:0001153;3.01e-07;1!UBERON:0001764;3.01e-07;1!UBERON:0009854;3.01e-07;1!UBERON:0001825;3.01e-07;1!UBERON:0001000;6.48e-07;1!UBERON:0005352;6.48e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,1.14e-16,25;UBERON:0001155,2.51e-16,9;UBERON:0000160,5.20e-15,17;UBERON:0000059,2.56e-13,11;UBERON:0002110,6.66e-09,3;UBERON:0006242,6.66e-09,3;UBERON:0001764,2.67e-07,1;UBERON:0001825,2.67e-07,1;UBERON:0001154,3.40e-07,1;UBERON:0001153,3.40e-07,1;UBERON:0001045,3.40e-07,1;UBERON:0001007,7.14e-07,145;UBERON:0001555,7.14e-07,145;UBERON:0007026,7.14e-07,145;UBERON:0001000,8.18e-07,1;UBERON:0005352,8.18e-07,1;UBERON:0001242,9.76e-07,4;UBERON:0001262,9.76e-07,4;UBERON:0004786,9.76e-07,4;UBERON:0004808,9.76e-07,4;UBERON:0001277,9.76e-07,4;UBERON:0004921,9.89e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0,0.61130724598361,0.328402357799783,0.472264687882075,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377875943688809,0,0,0.411167888021826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.982343066232845,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96781501668982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93375119346596,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0,0.254876273045038,2.49322802678617,0,0,0,0,0,0,0.103041011647722,0.732555718546747,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0.166849141711909,0.390776190804081,0,1.23087398947712,0.540911356951966,0.99921590399346,0,1.49712432326576,0,0,0,0,0.47748896947538,0,0.307160702099232,0,0.422008249231538,0,0.988823245360557,0,0.19924798825107,2.21027132424918,0,0,0,0,0.898683511473268,1.61119057208048,0,0.295930216910801,0,0,0.969332746095218,0.278304294485554,0,1.82299432759663,2.79871999987826,0,0,0,0.472775363535873,0,0,0,0,0.120596438625408,0,0,0,1.09692698576986,0,0.139423744278603,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0.19606253431774,0.839107934879214,0.37950746544837,0.317873157960757,0.632994193584081,0,2.12029607150911,0.649165919226273,4.97630965539252,2.21143911258348,3.05515072466813,0,0,0,0.269604531922708,0,0,0,0.19566461893209,0,1.18375320854817,0,0.30607276163049,0.758238955541855,0.450970258243478,0.103688191397247,0,0,0,0,0,0,0,0.0979923974143777,0,0.17472666824203,0,0.387025325156341,0.146178634172371,0.492692742319255,0,0,0,0,0,0.949661939338181,1.95551382734803,0.320635281006135,5.76323085796252,0.39961921916426,1.44090417154106,0.114536596165916,0,0,0.372757606696298,0.471388069233591,0,0,0,0,0,0.410716136675979,0,0,0,0,0.229160424011684,0,2.59582700648688,0,0,0,0,0,0,0,0,0,0,0,0.544813624446302,0,0.137539436597234,0,0.899895566206002,0.77380195455795,0.485996453264197,0,1.49730843868477,0.472091293214983,0,4.48218348332112,0.191915197319445,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,0.39669780522807,1.36869470307464,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,2.66991963625398,0,0.122026264901963,0.1251909307065,0.573409195690071,0.665574309221114,0.372578417648301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0.358177682162975,0,0,0.176689145945881,0,0,0,0,0.303859956177382,0.553033744606923,4.48178710330594,9.30053882193542,5.07052722193117,0,0.245772908753719,0.422624246717254,0,0,0,0,0.184105950251841,0,0,0,0.646948868380091,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0.205116364240755,0,0.484100767249525,0.484426936895553,0,0,0.471878893390961,0,0,0,0,0.397832444232549,0,0.20170506870352,0,0,0,0,0.472763092328763,0,0,0.570742291745161,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.227662191351298,0,0,0,0.611727596791485,0.328863867814245,0.354581522651905,0.556157009460346,0.78493092850514,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0.68732060563215,0.62041277132864,0,0.671132590786754,0.098150233615243,0.731507549893617,0,0.513314034281235,1.1598144313382,0,0,0.795803100645473,0.356760272332706,11.181662121857,0,0,1.00326405540328,0.218559560503957,0,0,0,0.588925401344836,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,6.57302749421866,0.458729283404541,0.143339583151451,0,0.339957450954573,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,1.28823786971007,1.07185652062471,0,0.413731983447581,0.426467963801962,0,0.129177819672012,0.372448285775147,0,0,0.606351566874658,0.435433495793923,0,0.404112318087525,0,0,0.325613074443898,0,0,0.359300808426348,0,0,0,0,0,1.28227396921293 | |||
|short_description=p2@SLC9A2 | |||
}} |
Latest revision as of 02:52, 16 September 2015
Short description: | p2@SLC9A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLC9A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -371bp_to_ENST00000233969, NM_003048, uc002tca.2_5end |
EntrezGene: | SLC9A2 |
HGNC: | 11072 |
UniProt: | Q9UBY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 1.38e-11 | 5 |
intestinal epithelial cell | 9.76e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 1.14e-16 | 25 |
colon | 2.51e-16 | 9 |
intestine | 5.20e-15 | 17 |
large intestine | 2.56e-13 | 11 |
gallbladder | 6.66e-09 | 3 |
gall bladder primordium | 6.66e-09 | 3 |
maxillary sinus | 2.67e-07 | 1 |
paranasal sinus | 2.67e-07 | 1 |
vermiform appendix | 3.40e-07 | 1 |
caecum | 3.40e-07 | 1 |
midgut | 3.40e-07 | 1 |
digestive system | 7.14e-07 | 145 |
digestive tract | 7.14e-07 | 145 |
primitive gut | 7.14e-07 | 145 |
vas deferens | 8.18e-07 | 1 |
spermatic cord | 8.18e-07 | 1 |
intestinal mucosa | 9.76e-07 | 4 |
wall of intestine | 9.76e-07 | 4 |
gastrointestinal system mucosa | 9.76e-07 | 4 |
gastrointestinal system epithelium | 9.76e-07 | 4 |
intestinal epithelium | 9.76e-07 | 4 |
subdivision of digestive tract | 9.89e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 1.12e-13 | 4 |
breast cancer | 1.12e-13 | 4 |
paranasal sinus cancer | 2.67e-07 | 1 |
maxillary sinus cancer | 2.67e-07 | 1 |
vascular disease | 2.84e-07 | 1 |
ischemia | 2.84e-07 | 1 |
extrinsic cardiomyopathy | 2.84e-07 | 1 |
myocardial ischemia | 2.84e-07 | 1 |
myocardial infarction | 2.84e-07 | 1 |
genetic disease | 7.29e-07 | 1 |
monogenic disease | 7.29e-07 | 1 |
xeroderma pigmentosum | 7.29e-07 | 1 |