FFCP PHASE1:Hg19::chr16:29789573..29789606,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=653808 | |EntrezGene=653808 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30961 | |HGNC=30961 | ||
|TSSclassifier=strong | |||
|UniProt=O60844 | |UniProt=O60844 | ||
|association_with_transcript=12bp_to_ENST00000400752,NM_152338,uc002dtr.3_5end | |association_with_transcript=12bp_to_ENST00000400752,NM_152338,uc002dtr.3_5end | ||
|cluster_id=chr16:29789573..29789606,+ | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_1_at_ZG16_5end | |description=CAGE_peak_1_at_ZG16_5end | ||
|id=chr16:29789573..29789606,+ | |id=chr16:29789573..29789606,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.25e-10!4 | |ontology_enrichment_celltype=CL:0002563!2.25e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0002231;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.45e-21;1 | |||
|ontology_enrichment_disease=DOID:178!8.22e-11!1;DOID:326!8.22e-11!1;DOID:3978!8.22e-11!1;DOID:3394!8.22e-11!1;DOID:5844!8.22e-11!1 | |ontology_enrichment_disease=DOID:178!8.22e-11!1;DOID:326!8.22e-11!1;DOID:3978!8.22e-11!1;DOID:3394!8.22e-11!1;DOID:5844!8.22e-11!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.26e-33!27;UBERON:0000059!3.25e-31!11;UBERON:0005409!1.04e-30!35;UBERON:0001155!7.74e-27!9;UBERON:0004907!1.05e-17!5;UBERON:0001154!3.76e-11!1;UBERON:0001153!3.76e-11!1;UBERON:0002146!1.21e-10!1;UBERON:0005623!1.21e-10!1;UBERON:0001242!2.25e-10!4;UBERON:0001262!2.25e-10!4;UBERON:0004786!2.25e-10!4;UBERON:0004808!2.25e-10!4;UBERON:0001277!2.25e-10!4;UBERON:0001052!2.48e-10!4;UBERON:0004119!8.36e-09!169;UBERON:0000925!8.36e-09!169;UBERON:0006595!8.36e-09!169;UBERON:0004921!8.66e-09!129;UBERON:0004185!8.66e-09!129;UBERON:0003350!1.79e-08!5;UBERON:0001007!2.51e-08!155;UBERON:0001555!2.51e-08!155;UBERON:0007026!2.51e-08!155;UBERON:0001046!2.91e-08!19 | |ontology_enrichment_uberon=UBERON:0000160!5.26e-33!27;UBERON:0000059!3.25e-31!11;UBERON:0005409!1.04e-30!35;UBERON:0001155!7.74e-27!9;UBERON:0004907!1.05e-17!5;UBERON:0001154!3.76e-11!1;UBERON:0001153!3.76e-11!1;UBERON:0002146!1.21e-10!1;UBERON:0005623!1.21e-10!1;UBERON:0001242!2.25e-10!4;UBERON:0001262!2.25e-10!4;UBERON:0004786!2.25e-10!4;UBERON:0004808!2.25e-10!4;UBERON:0001277!2.25e-10!4;UBERON:0001052!2.48e-10!4;UBERON:0004119!8.36e-09!169;UBERON:0000925!8.36e-09!169;UBERON:0006595!8.36e-09!169;UBERON:0004921!8.66e-09!129;UBERON:0004185!8.66e-09!129;UBERON:0003350!1.79e-08!5;UBERON:0001007!2.51e-08!155;UBERON:0001555!2.51e-08!155;UBERON:0007026!2.51e-08!155;UBERON:0001046!2.91e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.35e-53;17!UBERON:0000059;4.08e-45;11!UBERON:0005409;5.85e-42;22!UBERON:0001155;8.00e-36;9!UBERON:0004921;5.67e-28;33!UBERON:0001154;3.45e-21;1!UBERON:0001153;3.45e-21;1!UBERON:0009854;3.45e-21;1!UBERON:0004907;1.03e-16;5!UBERON:0001555;1.82e-10;54!UBERON:0001007;3.29e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.41e-53,17;UBERON:0000059,4.08e-45,11;UBERON:0005409,4.14e-37,25;UBERON:0001155,8.00e-36,9;UBERON:0001154,3.45e-21,1;UBERON:0001153,3.45e-21,1;UBERON:0001045,3.45e-21,1;UBERON:0004907,1.03e-16,5;UBERON:0004921,2.40e-10,118;UBERON:0001046,5.52e-10,19;UBERON:0001007,2.37e-08,145;UBERON:0001555,2.37e-08,145;UBERON:0007026,2.37e-08,145;UBERON:0004119,1.57e-07,160;UBERON:0000925,1.57e-07,160;UBERON:0006595,1.57e-07,160 | |||
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|short_description=p1@ZG16 | |short_description=p1@ZG16 | ||
}} | }} |
Latest revision as of 03:22, 16 September 2015
Short description: | p1@ZG16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZG16_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 12bp_to_ENST00000400752, NM_152338, uc002dtr.3_5end |
EntrezGene: | ZG16 |
HGNC: | 30961 |
UniProt: | O60844 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.41e-53 | 17 |
large intestine | 4.08e-45 | 11 |
gastrointestinal system | 4.14e-37 | 25 |
colon | 8.00e-36 | 9 |
vermiform appendix | 3.45e-21 | 1 |
caecum | 3.45e-21 | 1 |
midgut | 3.45e-21 | 1 |
lower digestive tract | 1.03e-16 | 5 |
subdivision of digestive tract | 2.40e-10 | 118 |
hindgut | 5.52e-10 | 19 |
digestive system | 2.37e-08 | 145 |
digestive tract | 2.37e-08 | 145 |
primitive gut | 2.37e-08 | 145 |
endoderm-derived structure | 1.57e-07 | 160 |
endoderm | 1.57e-07 | 160 |
presumptive endoderm | 1.57e-07 | 160 |