FFCP PHASE1:Hg19::chr11:119205222..119205247,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79102 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14646 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BY78 | |||
|association_with_transcript=0bp_to_ENST00000311413,uc001pwh.2_5end | |||
|cluster_id=chr11:119205222..119205247,+ | |||
|description=CAGE_peak_1_at_RNF26_5end | |||
|id=chr11:119205222..119205247,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.09e-20!254;CL:0002321!3.52e-11!248;CL:0000220!1.27e-10!246;CL:0000548!2.65e-10!679;CL:0000004!2.65e-10!679;CL:0000255!2.65e-10!679;CL:0000012!1.44e-09!682;CL:0000076!2.58e-07!62;CL:1000497!6.76e-07!18;CL:0002518!6.76e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.28e-07;17!CL:0002518;2.28e-07;17!CL:1000449;3.38e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.00e-20,253;CL:0002321,2.96e-11,250;CL:1000497,2.28e-07,17;CL:0002518,2.28e-07,17;CL:1000449,3.42e-07,15;CL:0000076,4.24e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.33e-23!235;DOID:14566!1.57e-22!239;DOID:0050687!1.31e-15!143;DOID:305!5.55e-11!106;DOID:0050686!8.56e-11!137;DOID:8692!1.74e-08!31;DOID:1240!1.57e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.15e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.33e-23,235;DOID:14566,1.57e-22,239;DOID:0050687,1.31e-15,143;DOID:305,5.55e-11,106;DOID:0050686,8.56e-11,137;DOID:8692,1.74e-08,31;DOID:1240,1.57e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0009569!8.40e-09!113;UBERON:0005177!2.83e-08!107;UBERON:0002417!3.32e-08!61;UBERON:0000916!3.32e-08!61;UBERON:0002100!5.50e-08!216;UBERON:0005172!8.25e-08!55;UBERON:0005173!8.25e-08!55;UBERON:0006554!1.85e-07!44;UBERON:0001008!5.53e-07!45;UBERON:0002113!7.58e-07!27;UBERON:0003918!7.58e-07!27;UBERON:0005095!7.58e-07!27;UBERON:0007687!7.58e-07!27;UBERON:0000466!8.50e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;2.68e-08;24!UBERON:0011143;2.68e-08;24!UBERON:0006554;1.30e-07;30!UBERON:0001008;1.30e-07;30!UBERON:0006555;3.38e-07;15!UBERON:0004819;3.38e-07;15!UBERON:0001285;3.38e-07;15!UBERON:0007684;3.38e-07;15!UBERON:0001851;7.21e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,1.02e-09,101;UBERON:0009569,5.66e-09,112;UBERON:0006554,7.20e-09,47;UBERON:0002100,8.59e-09,199;UBERON:0002417,2.09e-08,60;UBERON:0000916,2.09e-08,60;UBERON:0001008,2.40e-08,48;UBERON:0005172,5.11e-08,54;UBERON:0005173,5.11e-08,54;UBERON:0004211,3.42e-07,15;UBERON:0009773,3.42e-07,15;UBERON:0001231,3.42e-07,15;UBERON:0001285,3.42e-07,15;UBERON:0007684,3.42e-07,15;UBERON:0004208,3.42e-07,15;UBERON:0002113,3.55e-07,26;UBERON:0003918,3.55e-07,26;UBERON:0011143,3.55e-07,26;UBERON:0005095,3.55e-07,26;UBERON:0007687,3.55e-07,26;UBERON:0001851,7.08e-07,15 | |||
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| |||
|short_description=p1@RNF26 | |||
}} |
Latest revision as of 03:23, 16 September 2015
Short description: | p1@RNF26 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RNF26_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000311413, uc001pwh.2_5end |
EntrezGene: | RNF26 |
HGNC: | 14646 |
UniProt: | Q9BY78 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.00e-20 | 253 |
embryonic cell | 2.96e-11 | 250 |
kidney cell | 2.28e-07 | 17 |
kidney epithelial cell | 2.28e-07 | 17 |
epithelial cell of nephron | 3.42e-07 | 15 |
squamous epithelial cell | 4.24e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 1.02e-09 | 101 |
subdivision of trunk | 5.66e-09 | 112 |
urinary system structure | 7.20e-09 | 47 |
trunk | 8.59e-09 | 199 |
abdominal segment of trunk | 2.09e-08 | 60 |
abdomen | 2.09e-08 | 60 |
renal system | 2.40e-08 | 48 |
abdomen element | 5.11e-08 | 54 |
abdominal segment element | 5.11e-08 | 54 |
nephron epithelium | 3.42e-07 | 15 |
renal tubule | 3.42e-07 | 15 |
nephron tubule | 3.42e-07 | 15 |
nephron | 3.42e-07 | 15 |
uriniferous tubule | 3.42e-07 | 15 |
nephrogenic mesenchyme | 3.42e-07 | 15 |
kidney | 3.55e-07 | 26 |
kidney mesenchyme | 3.55e-07 | 26 |
upper urinary tract | 3.55e-07 | 26 |
kidney rudiment | 3.55e-07 | 26 |
kidney field | 3.55e-07 | 26 |
cortex | 7.08e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.33e-23 | 235 |
disease of cellular proliferation | 1.57e-22 | 239 |
cell type cancer | 1.31e-15 | 143 |
carcinoma | 5.55e-11 | 106 |
organ system cancer | 8.56e-11 | 137 |
myeloid leukemia | 1.74e-08 | 31 |
leukemia | 1.57e-07 | 39 |