FFCP PHASE1:Hg19::chr10:105212141..105212183,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51063 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23493 | |||
|TSSclassifier=strong | |||
|UniProt=Q9HA72 | |||
|association_with_transcript=0bp_to_ENST00000369788,ENST00000461631,NM_015916,NR_024552,uc001kxa.2,uc001kxb.2,uc001kxc.2_5end | |||
|cluster_id=chr10:105212141..105212183,- | |||
|coexpression_cluster_id=C2974 | |||
|description=CAGE_peak_3_at_CALHM2_5end | |||
|id=chr10:105212141..105212183,- | |||
|ontology_enrichment_celltype=CL:0000057!3.99e-14!75;CL:0000048!1.87e-09!430;CL:0000723!1.36e-08!436;CL:0002320!2.00e-08!365;CL:0000055!2.65e-08!180;CL:0000134!7.47e-08!358;CL:0000034!2.61e-07!444;CL:0002620!3.46e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.74e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.74e-14,76;CL:0000048,8.79e-11,427;CL:0000723,8.21e-10,433;CL:0002320,1.68e-09,361;CL:0000134,6.89e-09,354;CL:0000034,2.87e-08,441;CL:0002620,3.22e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.64e-11!216;UBERON:0002384!2.15e-08!375;UBERON:0004535!1.28e-07!110;UBERON:0001009!1.54e-07!113;UBERON:0002193!6.21e-07!112;UBERON:0002204!7.35e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,8.27e-16,315;UBERON:0004120,8.27e-16,315;UBERON:0006603,8.27e-16,315;UBERON:0003081,4.03e-14,203;UBERON:0002384,2.04e-09,371;UBERON:0002193,5.13e-08,108;UBERON:0002204,7.40e-08,167;UBERON:0004535,1.55e-07,109;UBERON:0001009,1.86e-07,112;UBERON:0002390,8.37e-07,98;UBERON:0003061,8.37e-07,98 | |||
|phase1_expression=10.9007027562334,5.56661362116556,7.89344662937438,9.00659685178174,6.25745532198203,8.72338524100369,0,5.68547886084148,15.9323233201902,3.19454117451962,3.48900583986214,10.2667444901181,10.5506791291381,6.93091576576261,6.95934489028623,1.34465029290355,3.01347264011988,5.11217063271161,5.36726078669558,7.75662665883764,6.32402142857184,3.44800193625897,2.0036519099174,4.10623275218653,3.51519390865448,12.3025583254202,10.590976039043,11.6491956344245,3.14691421479123,8.82807615623589,7.58599004248772,0,3.0120591877825,0.739508020333575,0.154934401160603,1.56386155736164,5.28480790802725,6.64794490238253,5.01361118675354,6.94434786290726,22.6154628982324,23.6442376193855,19.5757431401982,31.1152230988268,14.7371618038636,30.8081757708527,5.34586784883075,2.87817521615278,1.54853185447552,3.16461631554365,3.07392847834921,1.89185783910868,2.75796544589295,3.22742341791913,1.35426486594342,8.84738995850242,5.73102915121476,4.04502272001152,2.44867113896722,2.24650318953266,5.11469700639233,24.408996213817,12.7656740877844,18.3276642729058,0.580418477257168,0,0.622822248995575,3.51748131359441,2.60741459210101,2.38907729175628,1.81619850790011,1.47311054395026,0,14.1541041829001,13.8192794977278,11.3215668574523,16.0629942539488,14.7173354984676,13.1794981091606,9.4054205434612,12.3328339863436,10.7771850721134,3.51992488922645,4.91524750135918,6.22656477704488,3.41384178053206,4.80475184443215,8.62128659931725,2.64417949113945,0.954053754535364,2.27685187643779,5.28513470433845,1.91136614062614,2.64342657158052,0.560508562981536,4.74091352595139,2.75393678159366,2.75107533924415,8.63526295797939,16.5514630436771,3.2592226663359,3.31413464014313,7.79306913631645,29.8580024452265,9.42738903919479,10.4120930454302,13.2693893244858,27.4115424212945,34.205608408248,24.8301235951551,22.6607014584396,20.2862160014537,2.52087157375503,1.33770414044857,1.04535523804977,20.7356097136546,7.2811893784365,5.49803912772208,5.31341353240956,17.8396632021494,11.7195021694155,11.4054245333805,19.875915718266,20.9898042293246,17.4903017173284,22.7306161962256,12.3169199538157,8.46748321543876,6.68600489458768,4.63438092424957,12.1903433156981,7.37770945674,7.54389114876829,7.59022220007589,17.0454889616202,15.2088844908865,9.54343136461319,9.24606253575008,3.21418378357831,2.4390233720882,1.49319135678314,8.51363990735132,4.73583874780305,1.85392221392215,9.7364218096405,10.447784237956,15.6890393412261,4.29283123749616,1.14398982156026,3.71457501329565,9.93812036833526,7.74211135595512,13.8856200643038,5.08777147731609,10.9069853414576,6.60283300656162,4.80688423034664,6.20200222006389,3.20189636418039,2.67776490211736,15.3075140501476,9.12326526862215,15.3759096255347,9.19157700864672,3.24056779152704,11.0731663072259,10.55288051343,12.7250972946154,4.5994991239765,4.74632829784064,6.59526278149466,0,3.87780264148325,4.79703457356788,11.4303548889923,6.33152558322899,3.70745706277013,11.1866282092037,9.57604631935564,6.16745360156538,0,3.20667812942308,14.626918663789,6.19669091520565,11.1154094117152,8.62737337576109,3.45705554687999,13.3563216145264,8.42832207441865,8.55707732316674,12.7031378469031,9.15989089421366,6.47491777472526,7.02254033511243,13.8824836453327,9.33540811569437,19.7352242045712,17.8200428592308,18.7922866251703,32.765809029769,19.4026898290384,13.6352252302794,12.7620890269403,12.190821081304,13.608306247306,11.9530240361618,14.1223775372201,4.65071950956086,10.2252092342651,13.6676728843883,10.5965950579781,8.70264178644767,16.900614795104,11.5938243020533,21.0312047654696,9.78902726999344,16.661727882565,12.1168211637175,13.3472353031334,13.9015608864178,12.0703261455649,13.1985248678209,12.8866050155971,2.89891279744945,3.27295344709002,0.573609190778008,0.243947412259191,0.265059536642971,0.580969714347592,0.518305275076852,0,0,18.7739438795779,15.4377825166292,24.8642858434465,11.6091982007995,10.1063127433742,0,0,0,0,0,0,0,0,0,22.8828190933641,11.2193419042757,18.1092564985816,32.3419165048192,0,0,2.95394953340702,3.97316789473185,0.122988438543114,1.02940686179115,0.219500570817251,0,1.80952150340936,4.35165692245089,5.2129328849652,27.038304417269,5.77325368101093,4.17349457910277,1.87853910777315,10.1056513432752,9.72269576410883,7.41991193714933,18.9649055510226,13.735778593518,21.1746625235162,21.0603838625314,22.1460431810205,0.93733833986777,3.19166043577833,1.27597587518148,0.895585227028483,2.03443756959773,8.43441894163465,1.47798971368783,21.6599147672536,18.2448741675879,14.7002352485301,21.4612136824846,6.85777258355426,14.1335717456563,16.4104426094066,8.55362230113526,4.8328921570562,7.50857644609794,3.14409075893636,10.8767151815,3.92364061949952,4.2536205776151,2.84397774667111,157.368836174828,9.298330278116,6.64845291462176,11.4408180602503,4.62973273671856,2.83698264046557,5.59486575933809,3.14551586047925,5.42621605391443,6.58592269424615,8.14340460734338,6.75244702610837,6.33561498346743,8.44030255766841,5.22920075160176,7.49797433865428,13.37861587053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| |||
|short_description=p3@CALHM2 | |||
}} |
Latest revision as of 03:39, 16 September 2015
Short description: | p3@CALHM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CALHM2_5end |
Coexpression cluster: | C2974_Mesenchymal_tenocyte_CD14_Cardiac_Synoviocyte_mesodermal_Hepatic |
Association with transcript: | 0bp_to_ENST00000369788, ENST00000461631, NM_015916, NR_024552, uc001kxa.2, uc001kxb.2, uc001kxc.2_5end |
EntrezGene: | CALHM2 |
HGNC: | 23493 |
UniProt: | Q9HA72 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.74e-14 | 76 |
multi fate stem cell | 8.79e-11 | 427 |
somatic stem cell | 8.21e-10 | 433 |
connective tissue cell | 1.68e-09 | 361 |
mesenchymal cell | 6.89e-09 | 354 |
stem cell | 2.87e-08 | 441 |
skin fibroblast | 3.22e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 8.27e-16 | 315 |
mesoderm-derived structure | 8.27e-16 | 315 |
presumptive mesoderm | 8.27e-16 | 315 |
lateral plate mesoderm | 4.03e-14 | 203 |
connective tissue | 2.04e-09 | 371 |
hemolymphoid system | 5.13e-08 | 108 |
musculoskeletal system | 7.40e-08 | 167 |
cardiovascular system | 1.55e-07 | 109 |
circulatory system | 1.86e-07 | 112 |
hematopoietic system | 8.37e-07 | 98 |
blood island | 8.37e-07 | 98 |