FFCP PHASE1:Hg19::chr14:76447825..76447863,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7043 | |EntrezGene=7043 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11769 | |HGNC=11769 | ||
|TSSclassifier=strong | |||
|UniProt=A5YM40,B3KVH9,P10600,Q8WV88 | |UniProt=A5YM40,B3KVH9,P10600,Q8WV88 | ||
|association_with_transcript=228bp_to_NM_003239,uc001xsc.2,uc001xsd.2_5end | |association_with_transcript=228bp_to_NM_003239,uc001xsc.2,uc001xsd.2_5end | ||
|cluster_id=chr14:76447825..76447863,- | |||
|coexpression_cluster_id=C94 | |||
|description=CAGE_peak_5_at_TGFB3_5end | |description=CAGE_peak_5_at_TGFB3_5end | ||
|id=chr14:76447825..76447863,- | |id=chr14:76447825..76447863,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.04e-22!115;UBERON:0001049!9.49e-15!57;UBERON:0005068!9.49e-15!57;UBERON:0006241!9.49e-15!57;UBERON:0007135!9.49e-15!57;UBERON:0002346!9.28e-13!90;UBERON:0003075!2.78e-12!86;UBERON:0007284!2.78e-12!86;UBERON:0002616!2.37e-11!59;UBERON:0001017!6.66e-11!82;UBERON:0005743!2.13e-10!86;UBERON:0000073!2.55e-10!94;UBERON:0001016!2.55e-10!94;UBERON:0002780!9.83e-10!41;UBERON:0001890!9.83e-10!41;UBERON:0006240!9.83e-10!41;UBERON:0000955!9.98e-10!69;UBERON:0006238!9.98e-10!69;UBERON:0003080!2.71e-09!42;UBERON:0002020!2.23e-07!34;UBERON:0003528!2.23e-07!34;UBERON:0003076!3.46e-07!15;UBERON:0003057!3.46e-07!15;UBERON:0001893!3.78e-07!34;UBERON:0002791!8.67e-07!33 | |ontology_enrichment_uberon=UBERON:0007023!5.04e-22!115;UBERON:0001049!9.49e-15!57;UBERON:0005068!9.49e-15!57;UBERON:0006241!9.49e-15!57;UBERON:0007135!9.49e-15!57;UBERON:0002346!9.28e-13!90;UBERON:0003075!2.78e-12!86;UBERON:0007284!2.78e-12!86;UBERON:0002616!2.37e-11!59;UBERON:0001017!6.66e-11!82;UBERON:0005743!2.13e-10!86;UBERON:0000073!2.55e-10!94;UBERON:0001016!2.55e-10!94;UBERON:0002780!9.83e-10!41;UBERON:0001890!9.83e-10!41;UBERON:0006240!9.83e-10!41;UBERON:0000955!9.98e-10!69;UBERON:0006238!9.98e-10!69;UBERON:0003080!2.71e-09!42;UBERON:0002020!2.23e-07!34;UBERON:0003528!2.23e-07!34;UBERON:0003076!3.46e-07!15;UBERON:0003057!3.46e-07!15;UBERON:0001893!3.78e-07!34;UBERON:0002791!8.67e-07!33 | ||
|ontology_enrichment_uberon_v019=UBERON:0002081;6.42e-10;2!UBERON:0001875;1.65e-09;2!UBERON:0006514;1.65e-09;2!UBERON:0005090;4.14e-09;2!UBERON:0001630;4.14e-09;2!UBERON:0004151;7.22e-07;3!UBERON:0000922;7.86e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002081,6.47e-10,2;UBERON:0010227,6.47e-10,2;UBERON:0005090,1.40e-09,2;UBERON:0001630,1.40e-09,2;UBERON:0001875,2.05e-09,2;UBERON:0006514,2.05e-09,2;UBERON:0004151,7.25e-07,3 | |||
|phase1_expression=0,0.214100523890983,0.845726424575827,1.0007329835313,0.446961094427288,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0.940364164434263,0.572471974262113,1.77936752594749,1.50651167513763,0,0,0,0,0.383829398097213,0,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0.670700859703636,0,0.722878304769133,1.50401373190767,0.869079113764942,0.795285947051099,0.973269740605272,0.472674085820339,0,0.087834785693126,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0.901428353439581,0,0,0,0,0,0,0,0,0.168776332241266,0.194874010322397,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0.646882724578552,0.128343036279748,0.76228387266739,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0,0,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0.391602314925481,1.02943027143257,0,0,0,0,0,0,0.496215615637554,0.61384789315225,0.561320188866147,0.256278298511402,2.55853624533352,0.160853921143607,0,0,0.177561725313127,0.410635780069046,0,0.116210378459959,0.241718899183244,0,0,0.459257792658427,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0.096670718292122,0.616194468458578,0,0,0,0,0.0852266274161009,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0.37064843820784,0,0,0,0,0,0.855877976067841,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0.30982349809975,0.281695602532241,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0.36408156524854,0,0,0,0,0,0,0.422008249231538,0,0.329607748453519,0.211125408127993,1.39473591775749,0.276283915531148,0,0.102268682502155,0,0,0,0,0,1.08507746200627,0,0,0,0,0,0.260427761085233,17.5794599992353,0,0,0,0,0.344743373241465,0.291604613383254,0.173624994933292,0,0,1.52581736317083,0.331737779793674,0,0,0,0,0.615602068030377,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0.176915129006678,1.22206028986725,0.296521128680622,0.123563938946503,0,0.606610196826093,1.60515529459758,0.468528891450678,0,0,0,0.394584402849391,0,0.30607276163049,0.758238955541855,0.150323419414493,0,0,0,0,0,0,0.138674673013139,0,0,0,2.27144668714639,0,0,0,0,0.193978032976839,0,1.35588444468319,0.137041924646751,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0.171594997861965,0,0,0,0.135904206073614,0.104602846312333,0.101998217636322,0,2.40168115483916,1.23214841002794,0,0,0,0.558564802544508,0.229160424011684,2.87149209830726,0,0.429226048136571,0.223171457441873,0,0.360299883542404,0,0,0,0.0674035438541849,1.08270229666224,0,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0,0.303747783290123,0,0.315222829196793,0.0524545881349981,0,0.179287339332845,0,2.1440859791201,0.662091970365432,0,0.542999601753713,0,0,0,0,0.170388021785422,0.113312091520126,1.75862680413699,1.32506888912221,0.646414781807753,0.92562821219883,0,0,0.640724475406168,0.314408610199332,0,0.496166021811951,0,0,0,0.544017803369474,0,0,0,0,0,0.122026264901963,0,0.573409195690071,0.332787154610557,0.683060432355218,0,0,0,0,0.235265819698172,0,0,0.447764408660622,0,0.554805861502613,0,0,1.77962244319307,0,0,0,0,0,0,0,0,0,0,0.450772826991655,0,0.406870733204662,0,0,0,0.398095888698616,0,0.686791410365586,1.01024846629776,0,0.192619830407303,0.643324774124777,0,0,0,0,0.179088841081487,5.5584260488975,0.219284049578707,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.109209638192014,0.169732529954025,0.212574920101683,0.123935764259002,1.67593475391973,0.318004350653419,0,0,0.352675943690684,0,0.192687675289379,0,0.319267718114302,1.23069818544453,0.504143392443436,0.207471757392654,0,0,0,0,0,0,0,0,0.198916222116275,0.300841313397029,0.60511520611056,0.781514011233092,0.261906694481422,0,0.147856086217045,0.270150338473579,0,0,0.443910671357348,0.546974809018219,0,0.496211178389294,0,0,0.535701835878287,0.336283722218824,0,0.455324382702595,0.887023701626388,0,0,0.271878931907327,0.526182188502793,0,0.333694205676207,4.31712010677827,0,1.68163297988273,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| ||
|short_description=p5@TGFB3 | |short_description=p5@TGFB3 | ||
}} | }} |
Latest revision as of 04:21, 16 September 2015
Short description: | p5@TGFB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TGFB3_5end |
Coexpression cluster: | C94_smallcell_adrenal_lung_nonsmall_small_somatostatinoma_teratocarcinoma |
Association with transcript: | 228bp_to_NM_003239, uc001xsc.2, uc001xsd.2_5end |
EntrezGene: | TGFB3 |
HGNC: | 11769 |
UniProt: | A5YM40B3KVH9P10600Q8WV88 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac atrium | 6.47e-10 | 2 |
future cardiac atrium | 6.47e-10 | 2 |
muscle structure | 1.40e-09 | 2 |
muscle organ | 1.40e-09 | 2 |
globus pallidus | 2.05e-09 | 2 |
pallidum | 2.05e-09 | 2 |
cardiac chamber | 7.25e-07 | 3 |