FFCP PHASE1:Hg19::chr6:151203562..151203578,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25902 | |EntrezGene=25902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21055 | |HGNC=21055 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-367bp_to_ENST00000443074_5end | |association_with_transcript=-367bp_to_ENST00000443074_5end | ||
|cluster_id=chr6:151203562..151203578,+ | |||
|description=CAGE_peak_12_at_MTHFD1L_5end | |description=CAGE_peak_12_at_MTHFD1L_5end | ||
|id=chr6:151203562..151203578,+ | |id=chr6:151203562..151203578,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.02e-13!24;CL:0000222!1.97e-13!119;CL:0000071!4.75e-11!18;CL:0002546!4.75e-11!18;CL:0000213!5.65e-11!57;CL:0000215!5.65e-11!57;CL:0002078!5.83e-09!44;CL:0000115!6.14e-09!35;CL:0000359!2.26e-08!32;CL:0000192!8.77e-08!42;CL:0000514!8.77e-08!42 | |ontology_enrichment_celltype=CL:0002139!1.02e-13!24;CL:0000222!1.97e-13!119;CL:0000071!4.75e-11!18;CL:0002546!4.75e-11!18;CL:0000213!5.65e-11!57;CL:0000215!5.65e-11!57;CL:0002078!5.83e-09!44;CL:0000115!6.14e-09!35;CL:0000359!2.26e-08!32;CL:0000192!8.77e-08!42;CL:0000514!8.77e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000632;7.01e-15;3!CL:0000511;8.62e-12;1!CL:0002625;8.62e-12;1!CL:0000216;8.62e-12;1!CL:1000306;1.19e-11;4!CL:0002547;1.19e-11;4!CL:0000327;8.12e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,3.99e-15,3;CL:0000511,4.06e-12,1;CL:0002625,4.06e-12,1;CL:0000216,4.06e-12,1;CL:1000306,1.26e-11,4;CL:0002547,1.26e-11,4;CL:0000327,6.77e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.70e-12!14;DOID:120!1.01e-07!27;DOID:193!6.18e-07!29 | |||
|ontology_enrichment_disease_v019=DOID:3571;8.62e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,6.26e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000055!2.13e-25!69;UBERON:0001981!2.56e-24!60;UBERON:0007500!2.56e-24!60;UBERON:0004537!2.56e-24!60;UBERON:0006965!2.56e-24!60;UBERON:0004872!3.34e-24!84;UBERON:0002049!7.51e-22!79;UBERON:0007798!7.51e-22!79;UBERON:0003914!1.94e-16!118;UBERON:0004535!1.95e-16!110;UBERON:0001637!4.72e-16!42;UBERON:0003509!4.72e-16!42;UBERON:0004572!4.72e-16!42;UBERON:0001009!1.27e-15!113;UBERON:0000490!3.27e-12!138;UBERON:0004573!3.43e-12!33;UBERON:0004571!3.43e-12!33;UBERON:0006914!1.88e-11!25;UBERON:0001986!4.75e-11!18;UBERON:0004638!4.75e-11!18;UBERON:0004852!4.75e-11!18;UBERON:0000487!4.08e-10!22;UBERON:0000947!6.87e-10!21;UBERON:0010191!6.87e-10!21;UBERON:0000477!7.90e-08!286;UBERON:0001638!4.59e-07!9;UBERON:0003920!4.59e-07!9;UBERON:0004582!4.59e-07!9;UBERON:0000992!7.67e-07!13 | |ontology_enrichment_uberon=UBERON:0000055!2.13e-25!69;UBERON:0001981!2.56e-24!60;UBERON:0007500!2.56e-24!60;UBERON:0004537!2.56e-24!60;UBERON:0006965!2.56e-24!60;UBERON:0004872!3.34e-24!84;UBERON:0002049!7.51e-22!79;UBERON:0007798!7.51e-22!79;UBERON:0003914!1.94e-16!118;UBERON:0004535!1.95e-16!110;UBERON:0001637!4.72e-16!42;UBERON:0003509!4.72e-16!42;UBERON:0004572!4.72e-16!42;UBERON:0001009!1.27e-15!113;UBERON:0000490!3.27e-12!138;UBERON:0004573!3.43e-12!33;UBERON:0004571!3.43e-12!33;UBERON:0006914!1.88e-11!25;UBERON:0001986!4.75e-11!18;UBERON:0004638!4.75e-11!18;UBERON:0004852!4.75e-11!18;UBERON:0000487!4.08e-10!22;UBERON:0000947!6.87e-10!21;UBERON:0010191!6.87e-10!21;UBERON:0000477!7.90e-08!286;UBERON:0001638!4.59e-07!9;UBERON:0003920!4.59e-07!9;UBERON:0004582!4.59e-07!9;UBERON:0000992!7.67e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.49e-12;21!UBERON:0010191;1.49e-12;21!UBERON:0002134;3.26e-12;1!UBERON:0005208;3.26e-12;1!UBERON:0004145;3.26e-12;1!UBERON:0005946;3.26e-12;1!UBERON:0005965;3.26e-12;1!UBERON:0002078;3.26e-12;1!UBERON:0001136;8.62e-12;1!UBERON:0001343;8.62e-12;1!UBERON:0004910;8.62e-12;1!UBERON:0004813;8.62e-12;1!UBERON:0004797;1.19e-11;4!UBERON:0000415;1.19e-11;4!UBERON:0007240;1.19e-11;4!UBERON:0005742;1.19e-11;4!UBERON:0005734;1.19e-11;4!UBERON:0004664;1.19e-11;4!UBERON:0004663;1.19e-11;4!UBERON:0004573;7.10e-10;33!UBERON:0004571;7.10e-10;33!UBERON:0001637;4.61e-08;42!UBERON:0003509;4.61e-08;42!UBERON:0004572;4.61e-08;42!UBERON:0002081;9.95e-07;2!UBERON:0002133;9.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004797,2.11e-14,7;UBERON:0000947,1.57e-12,21;UBERON:0010191,1.57e-12,21;UBERON:0002134,2.93e-12,1;UBERON:0005208,2.93e-12,1;UBERON:0005946,2.93e-12,1;UBERON:0005965,2.93e-12,1;UBERON:0002078,2.93e-12,1;UBERON:0001136,4.06e-12,1;UBERON:0001343,4.06e-12,1;UBERON:0004910,4.06e-12,1;UBERON:0005154,4.06e-12,1;UBERON:0005295,4.06e-12,1;UBERON:0004813,4.06e-12,1;UBERON:0005297,4.06e-12,1;UBERON:0005294,4.06e-12,1;UBERON:0010141,4.06e-12,1;UBERON:0005891,4.06e-12,1;UBERON:0000415,1.26e-11,4;UBERON:0007240,1.26e-11,4;UBERON:0005742,1.26e-11,4;UBERON:0005734,1.26e-11,4;UBERON:0004664,1.26e-11,4;UBERON:0004663,1.26e-11,4;UBERON:0004573,4.08e-11,33;UBERON:0004571,4.08e-11,33;UBERON:0000055,5.60e-09,68;UBERON:0001637,1.20e-08,42;UBERON:0003509,1.20e-08,42;UBERON:0004572,1.20e-08,42;UBERON:0007500,4.04e-08,59;UBERON:0001981,4.04e-08,59;UBERON:0004537,4.04e-08,59;UBERON:0006965,4.04e-08,59;UBERON:0002049,1.05e-07,78;UBERON:0007798,1.05e-07,78;UBERON:0004872,3.06e-07,83;UBERON:0002081,9.44e-07,2;UBERON:0002133,9.44e-07,2;UBERON:0010227,9.44e-07,2 | |||
|phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.71153252537342,1.00416183829401,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.714397826272638,0.44905874525234,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,5.03154887090231,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.453728732640084,0.358779271377724,0.213557388818567,0,0,0,1.03056216018252,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0.646584227275248,1.42003837006646,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0,0,0,0,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.896974044789907,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.74129687641568,0.715624433709956,0,0,0,0,0,0.636406495851874,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0.286822704408103,0,0,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0.290268993867255,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0,0,0,0,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0,0.251567901752575,0,0.228840068396924,0.453692771289717,0,0.73927574994817,0.159296767163702,0,0.155262956876259,2.07353103920428,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0.406870733204662,0.181848659202559,0.322231671127465,0.928067519756987,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0.181678379270557,0,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0.602694528023977,0,1.46379839637152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0,1.04142150482278,0.56530794192401,0.419499436209906,0,0.208994966536811,0,0.71153252537342,1.00416183829401,0.402829317109147,0,0.24406205754817,0,0.81014194788176,0.714397826272638,0.44905874525234,0.337834441449967,0,0.949265659568129,0.183201743930407,0,0,0,0.993943903390637,0.12663051166458,5.03154887090231,1.14734648299525,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0.453728732640084,0.358779271377724,0.213557388818567,0,0,0,1.03056216018252,0,0.506328996723799,0,0.252433774244115,0.184099797284599,0.646584227275248,1.42003837006646,0.403008392910561,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0,0,0,0,0.769494313892781,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.433099343283221,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0.300343057843917,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0.791951872933429,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03985430765404,0.892144943985809,0.473107245101804,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0,0.896974044789907,0,0.482561763430822,0,0.154209693802656,0,0,0,0,0,0.200506470303285,0,0.34444334449382,0,0,0,0.0770153371044148,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0,0,0,0,0,1.6068392984416,0,0,0,0,0,0,0,0,0,0,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.74129687641568,0.715624433709956,0,0,0,0,0,0.636406495851874,0,0,0.274537029736055,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0.141405431953713,0,1.10273068709225,0,0,0,0,0.202910376962704,0.92947049429925,0.563391205064483,0.286822704408103,0,0,0,0.211107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0.333926115068718,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0,0,0.21787692703798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,0,0.0870592065804026,0,0,0.290268993867255,0.146178634172371,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0,2.15361907373044,0,0,0,0,1.44119953416961,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,1.10961172300523,0,0.251567901752575,0,0.228840068396924,0.453692771289717,0,0.73927574994817,0.159296767163702,0,0.155262956876259,2.07353103920428,0.265841714557995,0.521745061811734,0.150257608997218,0.761610424337591,0.406870733204662,0.181848659202559,0.322231671127465,0.928067519756987,0,0,0.343395705182793,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0,0,0,0,0,0.690860683462397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0.0714765441766563,0,0,0,1.60342272946051,0,0.17071847709395,0,0,0,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,1.1598144313382,0.485710993059139,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p12@MTHFD1L | |short_description=p12@MTHFD1L | ||
}} | }} |
Latest revision as of 04:25, 16 September 2015
Short description: | p12@MTHFD1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_MTHFD1L_5end |
Coexpression cluster: | NA |
Association with transcript: | -367bp_to_ENST00000443074_5end |
EntrezGene: | MTHFD1L |
HGNC: | 21055 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 3.99e-15 | 3 |
androgen binding protein secreting cell | 4.06e-12 | 1 |
seminiferous tubule epithelial cell | 4.06e-12 | 1 |
Sertoli cell | 4.06e-12 | 1 |
fibroblast of tunica adventitia of artery | 1.26e-11 | 4 |
fibroblast of the aortic adventitia | 1.26e-11 | 4 |
extracellular matrix secreting cell | 6.77e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 6.26e-12 | 1 |