FFCP PHASE1:Hg19::chr8:12808720..12808732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57604 | |EntrezGene=57604 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26725 | |HGNC=26725 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-105bp_to_ENST00000528335_5end | |association_with_transcript=-105bp_to_ENST00000528335_5end | ||
|cluster_id=chr8:12808720..12808732,+ | |||
|coexpression_cluster_id=C63 | |||
|description=CAGE_peak_19_at_KIAA1456_5end | |description=CAGE_peak_19_at_KIAA1456_5end | ||
|id=chr8:12808720..12808732,+ | |id=chr8:12808720..12808732,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000333;2.72e-27;5!CL:0002321;8.10e-10;15 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.56e-27!10;DOID:3095!3.00e-12!22;DOID:2994!3.00e-12!22 | |ontology_enrichment_disease=DOID:171!1.56e-27!10;DOID:3095!3.00e-12!22;DOID:2994!3.00e-12!22 | ||
|ontology_enrichment_disease_v019=DOID:171;1.29e-117;10!DOID:3095;6.24e-54;22!DOID:2994;6.24e-54;22!DOID:169;6.07e-23;6!DOID:3193;7.67e-18;2!DOID:962;7.67e-18;2!DOID:1192;2.31e-12;3 | |||
|ontology_enrichment_disease_v019_2=DOID:171,1.29e-117,10;DOID:3095,6.24e-54,22;DOID:2994,6.24e-54,22;DOID:169,6.07e-23,6;DOID:3193,7.67e-18,2;DOID:962,7.67e-18,2;DOID:1192,2.31e-12,3;DOID:0050687,1.02e-08,143 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002346;1.07e-130;4!UBERON:0000923;1.07e-130;4!UBERON:0010316;1.07e-130;4!UBERON:0005291;1.07e-130;4!UBERON:0002050;8.85e-105;5!UBERON:0005423;8.85e-105;5!UBERON:0000013;2.72e-27;5!UBERON:0002410;2.72e-27;5!UBERON:0003714;7.67e-18;2!UBERON:0000010;1.13e-15;8!UBERON:0000922;6.43e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,2.72e-27,5;UBERON:0002410,2.72e-27,5;UBERON:0003714,7.67e-18,2;UBERON:0000010,1.13e-15,8;UBERON:0004121,3.21e-07,171;UBERON:0000924,3.21e-07,171;UBERON:0006601,3.21e-07,171 | |||
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|short_description=p19@KIAA1456 | |short_description=p19@KIAA1456 | ||
}} | }} |
Latest revision as of 04:52, 16 September 2015
Short description: | p19@KIAA1456 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_KIAA1456_5end |
Coexpression cluster: | C63_neuroectodermal_neuroblastoma_carcinoid_peripheral_chronic_neuroepithelioma_acute |
Association with transcript: | -105bp_to_ENST00000528335_5end |
EntrezGene: | KIAA1456 |
HGNC: | 26725 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 2.72e-27 | 5 |
autonomic nervous system | 2.72e-27 | 5 |
neural tissue | 7.67e-18 | 2 |
peripheral nervous system | 1.13e-15 | 8 |
ectoderm-derived structure | 3.21e-07 | 171 |
ectoderm | 3.21e-07 | 171 |
presumptive ectoderm | 3.21e-07 | 171 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 1.29e-117 | 10 |
germ cell and embryonal cancer | 6.24e-54 | 22 |
germ cell cancer | 6.24e-54 | 22 |
neuroendocrine tumor | 6.07e-23 | 6 |
peripheral nerve sheath neoplasm | 7.67e-18 | 2 |
neurofibroma | 7.67e-18 | 2 |
peripheral nervous system neoplasm | 2.31e-12 | 3 |
cell type cancer | 1.02e-08 | 143 |