FFCP PHASE1:Hg19::chr9:135853402..135853417,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8328 | |EntrezGene=8328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=4238 | |HGNC=4238 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-476bp_to_uc004ccg.2,uc010mzy.2_5end | |association_with_transcript=-476bp_to_uc004ccg.2,uc010mzy.2_5end | ||
|cluster_id=chr9:135853402..135853417,+ | |||
|coexpression_cluster_id=C4806 | |coexpression_cluster_id=C4806 | ||
|description=CAGE_peak_4_at_GFI1B_5end | |description=CAGE_peak_4_at_GFI1B_5end | ||
|id=chr9:135853402..135853417,+ | |id=chr9:135853402..135853417,+ | ||
|ontology_enrichment_celltype=CL:0000037!7.55e-10!172;CL:0000566!7.55e-10!172;CL:0000988!6.12e-09!182;CL:0002032!9.25e-09!165;CL:0000837!9.25e-09!165;CL:0000764!1.44e-08!2;CL:0000765!1.44e-08!2;CL:0000050!1.44e-08!2;CL:0000038!1.44e-08!2;CL:0000558!1.44e-08!2;CL:0000547!1.44e-08!2;CL:0000549!1.44e-08!2;CL:0000550!1.44e-08!2;CL:0000552!1.44e-08!2 | |ontology_enrichment_celltype=CL:0000037!7.55e-10!172;CL:0000566!7.55e-10!172;CL:0000988!6.12e-09!182;CL:0002032!9.25e-09!165;CL:0000837!9.25e-09!165;CL:0000764!1.44e-08!2;CL:0000765!1.44e-08!2;CL:0000050!1.44e-08!2;CL:0000038!1.44e-08!2;CL:0000558!1.44e-08!2;CL:0000547!1.44e-08!2;CL:0000549!1.44e-08!2;CL:0000550!1.44e-08!2;CL:0000552!1.44e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.70e-22;2!CL:0000558;5.70e-22;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,6.01e-22,2;CL:0000765,6.01e-22,2;CL:0000050,6.01e-22,2;CL:0000038,6.01e-22,2;CL:0000558,6.01e-22,2;CL:0000547,6.01e-22,2;CL:0000549,6.01e-22,2;CL:0000550,6.01e-22,2;CL:0000552,6.01e-22,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!3.59e-25!31;DOID:1036!1.54e-20!8;DOID:1240!3.48e-19!39;DOID:2531!6.60e-18!51;DOID:0060083!6.60e-18!51 | |ontology_enrichment_disease=DOID:8692!3.59e-25!31;DOID:1036!1.54e-20!8;DOID:1240!3.48e-19!39;DOID:2531!6.60e-18!51;DOID:0060083!6.60e-18!51 | ||
|ontology_enrichment_disease_v019=DOID:9119;2.63e-12;1!DOID:8692;1.32e-11;31!DOID:1240;5.40e-08;39!DOID:2531;5.25e-07;51!DOID:0060083;5.25e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.63e-12,1;DOID:8692,6.70e-12,31;DOID:2531,1.63e-09,51;DOID:0060083,1.63e-09,51;DOID:1240,2.24e-09,39 | |||
|ontology_enrichment_uberon=UBERON:0000178!1.77e-18!15;UBERON:0000179!1.77e-18!15;UBERON:0000463!1.77e-18!15 | |ontology_enrichment_uberon=UBERON:0000178!1.77e-18!15;UBERON:0000179!1.77e-18!15;UBERON:0000463!1.77e-18!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.04e-44;15!UBERON:0000179;9.04e-44;15!UBERON:0000463;9.04e-44;15!UBERON:0002390;5.13e-19;32!UBERON:0002193;5.44e-11;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.08e-44,15;UBERON:0000179,8.08e-44,15;UBERON:0000463,8.08e-44,15;UBERON:0007023,7.74e-08,114 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.840547463227464,1.06730766284929,0.550975469195755,0,0,0,0,0,0,5.50017124120142,0.426507697462265,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.16593765627276,2.61435451024901,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.64150457541122,4.58782324285425,1.70894156152249,2.85878130549347,3.29089818468955,3.8908398671563,5.40031437238115,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0.383010740264733,6.56188106444037,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,8.63059139075251,3.69262196843137,0.270455678475983,18.6520302078779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.615424027305347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41282230755522,0.166211681900156,0.676786981851542,0.588187602953219,0.503464760927528,0.189753732724185,1.11255605286265,0,0,0.565412285735763,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.446342914883745,0,0,0,0.0787831823072236,0.247247575143499,0.0674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0,0,0,0,0.213574825135389,0.628817220398664,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.691403925334676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0,0,0,0,0.187967835959707,0.837952543656503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@GFI1B | |short_description=p4@GFI1B | ||
}} | }} |
Latest revision as of 05:00, 16 September 2015
Short description: | p4@GFI1B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GFI1B_5end |
Coexpression cluster: | C4806_acute_Whole_Burkitt_Reticulocytes_chronic_CD34_Neutrophils |
Association with transcript: | -476bp_to_uc004ccg.2, uc010mzy.2_5end |
EntrezGene: | GFI1B |
HGNC: | 4238 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 6.01e-22 | 2 |
erythroblast | 6.01e-22 | 2 |
megakaryocyte-erythroid progenitor cell | 6.01e-22 | 2 |
erythroid progenitor cell | 6.01e-22 | 2 |
reticulocyte | 6.01e-22 | 2 |
proerythroblast | 6.01e-22 | 2 |
basophilic erythroblast | 6.01e-22 | 2 |
polychromatophilic erythroblast | 6.01e-22 | 2 |
orthochromatic erythroblast | 6.01e-22 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 8.08e-44 | 15 |
haemolymphatic fluid | 8.08e-44 | 15 |
organism substance | 8.08e-44 | 15 |
adult organism | 7.74e-08 | 114 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.63e-12 | 1 |
myeloid leukemia | 6.70e-12 | 31 |
hematologic cancer | 1.63e-09 | 51 |
immune system cancer | 1.63e-09 | 51 |
leukemia | 2.24e-09 | 39 |