FFCP PHASE1:Hg19::chr5:149865517..149865531,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3340 | |EntrezGene=3340 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7680 | |HGNC=7680 | ||
|TSSclassifier=strong | |||
|UniProt=E5RGN9 | |UniProt=E5RGN9 | ||
|association_with_transcript=136bp_to_ENST00000522491_5end | |association_with_transcript=136bp_to_ENST00000522491_5end | ||
|cluster_id=chr5:149865517..149865531,+ | |||
|description=CAGE_peak_7_at_NDST1_5end | |description=CAGE_peak_7_at_NDST1_5end | ||
|id=chr5:149865517..149865531,+ | |id=chr5:149865517..149865531,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.10e-13!180;CL:0002371!1.30e-13!591;CL:0000144!4.98e-12!625;CL:0000220!1.14e-10!246;CL:0002321!3.01e-10!248;CL:0000222!7.64e-10!119;CL:0000057!1.32e-08!75;CL:0000183!6.44e-08!59;CL:0000680!9.50e-08!57;CL:0000056!9.50e-08!57;CL:0000355!9.50e-08!57;CL:0000192!2.60e-07!42;CL:0000514!2.60e-07!42;CL:0000548!2.96e-07!679;CL:0000004!2.96e-07!679;CL:0000255!2.96e-07!679;CL:0002334!3.88e-07!12;CL:0000187!8.56e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.10e-13!180;CL:0002371!1.30e-13!591;CL:0000144!4.98e-12!625;CL:0000220!1.14e-10!246;CL:0002321!3.01e-10!248;CL:0000222!7.64e-10!119;CL:0000057!1.32e-08!75;CL:0000183!6.44e-08!59;CL:0000680!9.50e-08!57;CL:0000056!9.50e-08!57;CL:0000355!9.50e-08!57;CL:0000192!2.60e-07!42;CL:0000514!2.60e-07!42;CL:0000548!2.96e-07!679;CL:0000004!2.96e-07!679;CL:0000255!2.96e-07!679;CL:0002334!3.88e-07!12;CL:0000187!8.56e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002334;9.83e-11;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.34e-10,12;CL:0000048,4.91e-09,427;CL:0000057,1.33e-08,76;CL:0000723,1.94e-08,433;CL:0000034,1.11e-07,441 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000480!6.46e-10!626;UBERON:0000467!6.73e-10!625;UBERON:0000468!2.35e-09!659;UBERON:0000914!4.90e-09!83;UBERON:0002329!4.90e-09!83;UBERON:0003077!4.90e-09!83;UBERON:0003059!4.90e-09!83;UBERON:0007282!4.90e-09!83;UBERON:0009618!4.90e-09!83;UBERON:0007285!4.90e-09!83;UBERON:0004872!2.39e-08!84;UBERON:0002049!2.62e-08!79;UBERON:0007798!2.62e-08!79;UBERON:0000055!6.13e-08!69;UBERON:0001981!8.26e-08!60;UBERON:0007500!8.26e-08!60;UBERON:0004537!8.26e-08!60;UBERON:0006965!8.26e-08!60;UBERON:0000486!1.05e-07!82;UBERON:0000475!2.25e-07!365;UBERON:0001637!2.44e-07!42;UBERON:0003509!2.44e-07!42;UBERON:0004572!2.44e-07!42;UBERON:0004290!4.18e-07!70;UBERON:0002204!5.12e-07!167;UBERON:0001134!6.22e-07!61;UBERON:0002036!6.22e-07!61;UBERON:0003082!6.22e-07!61 | |ontology_enrichment_uberon=UBERON:0000480!6.46e-10!626;UBERON:0000467!6.73e-10!625;UBERON:0000468!2.35e-09!659;UBERON:0000914!4.90e-09!83;UBERON:0002329!4.90e-09!83;UBERON:0003077!4.90e-09!83;UBERON:0003059!4.90e-09!83;UBERON:0007282!4.90e-09!83;UBERON:0009618!4.90e-09!83;UBERON:0007285!4.90e-09!83;UBERON:0004872!2.39e-08!84;UBERON:0002049!2.62e-08!79;UBERON:0007798!2.62e-08!79;UBERON:0000055!6.13e-08!69;UBERON:0001981!8.26e-08!60;UBERON:0007500!8.26e-08!60;UBERON:0004537!8.26e-08!60;UBERON:0006965!8.26e-08!60;UBERON:0000486!1.05e-07!82;UBERON:0000475!2.25e-07!365;UBERON:0001637!2.44e-07!42;UBERON:0003509!2.44e-07!42;UBERON:0004572!2.44e-07!42;UBERON:0004290!4.18e-07!70;UBERON:0002204!5.12e-07!167;UBERON:0001134!6.22e-07!61;UBERON:0002036!6.22e-07!61;UBERON:0003082!6.22e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0003688;7.64e-07;6!UBERON:0002358;7.64e-07;6!UBERON:0003684;7.64e-07;6!UBERON:0001178;7.64e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,3.95e-09,315;UBERON:0004120,3.95e-09,315;UBERON:0006603,3.95e-09,315;UBERON:0004872,1.67e-07,83;UBERON:0001637,2.68e-07,42;UBERON:0003509,2.68e-07,42;UBERON:0004572,2.68e-07,42;UBERON:0003081,7.95e-07,203 | |||
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|phase1_expression=3.99692434395225,2.99740733447376,2.67813367782345,1.0007329835313,4.02264984984559,1.74467704820074,0,0,0.783556884599516,2.7030733015166,3.48900583986214,0.218441372130172,2.11013582582763,0.74259811776028,0.662794751455832,0.672325146451775,1.20538905604795,0,1.46379839637152,1.23121058076788,2.44800829493104,2.19418305034661,0.286235987131057,0.136874425072884,0.251085279189606,0.61130724598361,0.328402357799783,0.0787107813136792,1.18009283054671,0,0.464448369948228,1.83884244895785,2.10844143144775,1.47901604066715,0,0.142169232487422,0,0.553995408531877,0.601633342410425,1.30206522429511,0.447830948479849,1.29557466407592,0.77272670290256,2.61716829803216,0.377875943688809,1.21292030593908,1.62700325833979,0.411167888021826,0.309706370895104,1.43846196161075,1.0246428261164,0,0.689491361473237,2.5819387343353,0,0.752969358170419,1.09162460023138,0.224723484445085,0.918251677112708,0.320929027076094,1.91801137739712,0.659702600373432,0.598390972864896,0.852449501065388,0.580418477257168,0.56738522469114,0,1.00499466102697,2.08593167368081,0,0,0,0,0,0,0.419317291016752,0.112328631146495,0.600707571366025,0.16072558669708,0,0.39783335439818,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.639312809217652,0.361439152384566,1.50401373190767,1.01392563272577,0,0,0.756278537312543,0.443458794925128,1.40535657109002,0.72038491523742,1.82147644146271,0.741568885568859,2.59637914923747,3.13433527138681,3.72282289452822,0,0,0,1.39133685156694,0.860234595106124,0,1.13061588384802,3.35599548967925,2.20094433552054,1.8809546988313,0.775250277507987,0.71153252537342,0.66944122552934,1.61131726843659,0,0.732186172644509,0.735326160691737,0.81014194788176,0.446498641420399,0.673588117878509,0.337834441449967,1.53316637465883,0.949265659568129,2.38162267109529,2.63560834872127,0,0.436094052142534,1.98788780678127,1.64619665163954,0.529636723252875,2.0078563452417,1.06400514659507,0,2.1349799145941,3.45334567784024,0,0.808264032418128,0.326923806226917,0.756787138224657,0.576175924479999,0.937285727335186,0,1.71141546463335,1.19558944441441,0.23486899728753,0.161872944368132,0.842704840213491,0.408308342509787,0.245668634623536,0.413303124703062,1.18800285728205,1.23633464639278,0.910161361938026,1.43723628363248,0.336672227908132,0.125118519871964,1.10825646193673,2.63386572528503,2.75839016219118,1.50238058906597,0.113432183160021,0.89694817844431,1.2813443329114,1.48352330811693,0.900273288253207,2.16410311400722,2.31876486041066,3.7223371266318,1.0126579934476,1.75386609290158,1.51460264546469,2.76149695926898,0.646584227275248,3.55009592516614,1.61203357164224,0.508681776931463,1.73934767846967,0.272746120590835,2.58124135850103,0,0.132529768321485,0.116193942869518,0.207322110030741,0.252320850875628,0.36497735907583,4.69348596989448,4.5026865673502,0,2.3218396401599,4.33127689001751,0.236613600079688,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0,0.269662616320329,0.196221465125346,0,0.738155454624648,2.80483547606892,0.4115740113314,4.41026134156626,0,0,1.77236972004421,0,0.491953754172454,0.857839051492628,0.878002283269004,0,0.402115889646523,0.370353780634118,0.651616610620649,0,1.44331342025273,0.115930404975077,1.76113041353732,0.144366447761074,0.462985512576611,0.380508304469197,0,0,1.23108503043699,2.34004265139238,2.22946743433092,0.93733833986777,4.03157107677263,0.992425680696705,0.179117045405697,0,0,0.492663237895943,1.67292024625129,1.86595303986695,0.720599767084807,2.01987893482208,1.52394946301206,2.29193055334967,3.51652341630141,5.13217338068116,1.13110241973656,2.10240140490742,0.857479297891735,0.672786506072164,0.43596006883328,0.66004457238855,3.61960804121778,0,1.690605505112,1.59562869950922,4.16029747645464,0,1.41849132023278,0.266422179016099,0.57191197463259,0.542621605391443,0,0.65147236858747,0.710783897485092,0,1.20575750823834,0.871533458600294,1.19967589418468,2.43247561282381,2.00902836572851,0,1.19812427745791,2.29723871668228,0,2.60606352001643,1.43833425785268,1.79060963239896,0,0,0,0.128343036279748,0.508189248444927,2.60279707715243,0,0.167516265334349,0,4.49404214368309,2.99161459204025,2.07207756718018,0.12269149171914,0,1.35632511849868,1.66376689224646,2.85486382075459,2.05013139544115,0.819989904948992,1.50473049863859,0,0,0,2.02806085395873,1.82455590382974,1.76221041716467,1.37257369524342,0.206768026122887,0.215714200818617,0.640365346820666,1.5156378572313,1.66435439510497,1.20956117331872,3.72161711728165,1.53461973288062,4.77122160536225,2.17836553734692,4.09365799253363,3.86049410744658,2.96836132889982,2.00472601943452,2.84098760501003,1.31403449622095,1.03850885836724,1.39452454151951,0.120859449591622,6.81721999031168,0.828728900423067,1.49258782613989,0.910455840033585,1.96686622439136,0,0.385076685522074,0,0,0.211103257785751,1.13733384070897,1.87103075804167,0.431831832204279,0,0.541892875087706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| ||
|short_description=p7@NDST1 | |short_description=p7@NDST1 | ||
}} | }} |
Latest revision as of 05:03, 16 September 2015
Short description: | p7@NDST1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NDST1_5end |
Coexpression cluster: | NA |
Association with transcript: | 136bp_to_ENST00000522491_5end |
EntrezGene: | NDST1 |
HGNC: | 7680 |
UniProt: | E5RGN9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.34e-10 | 12 |
multi fate stem cell | 4.91e-09 | 427 |
fibroblast | 1.33e-08 | 76 |
somatic stem cell | 1.94e-08 | 433 |
stem cell | 1.11e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 3.95e-09 | 315 |
mesoderm-derived structure | 3.95e-09 | 315 |
presumptive mesoderm | 3.95e-09 | 315 |
splanchnic layer of lateral plate mesoderm | 1.67e-07 | 83 |
artery | 2.68e-07 | 42 |
arterial blood vessel | 2.68e-07 | 42 |
arterial system | 2.68e-07 | 42 |
lateral plate mesoderm | 7.95e-07 | 203 |