FFCP PHASE1:Hg19::chr4:155487038..155487071,+: Difference between revisions
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|id=chr4:155487038..155487071,+
|short_description=p3@FGB
|description=CAGE_peak_3_at_FGB_5end
|association_with_transcript=105bp_to_ENST00000473984_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2244 | |EntrezGene=2244 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3662 | |HGNC=3662 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=105bp_to_ENST00000473984_5end | |||
|cluster_id=chr4:155487038..155487071,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_FGB_5end | |||
|id=chr4:155487038..155487071,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.01e-28!12;CL:0000417!2.01e-28!12;CL:0000668!2.01e-28!12;CL:0000414!2.01e-28!12;CL:0000412!2.01e-28!12;CL:0000182!2.01e-28!12;CL:0000223!6.96e-12!59;CL:0002322!2.70e-08!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.09e-17;12!CL:0002563;9.90e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.09e-17,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.20e-09;11!UBERON:0009497;9.20e-08;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.68e-31!19;UBERON:0006925!1.68e-31!19;UBERON:0008836!1.68e-31!19;UBERON:0008835!4.35e-27!22;UBERON:0003894!4.35e-27!22;UBERON:0009854!7.16e-26!23;UBERON:0007499!9.91e-24!25;UBERON:0009497!9.91e-24!25;UBERON:0000015!9.91e-24!25;UBERON:0002423!9.91e-24!25;UBERON:0006235!9.91e-24!25;UBERON:0004161!9.91e-24!25;UBERON:0005057!8.78e-23!26;UBERON:0009856!8.78e-23!26;UBERON:0005172!1.92e-19!55;UBERON:0005173!1.92e-19!55;UBERON:0002365!5.84e-19!31;UBERON:0002330!5.84e-19!31;UBERON:0002417!2.29e-17!61;UBERON:0000916!2.29e-17!61;UBERON:0002368!1.10e-16!35;UBERON:0003929!2.25e-16!54;UBERON:0000949!9.20e-13!45;UBERON:0002530!5.21e-12!59;UBERON:0005177!5.32e-11!107;UBERON:0005911!2.79e-10!82;UBERON:0009569!1.36e-08!113;UBERON:0004921!2.96e-07!129;UBERON:0004185!2.96e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.54e-29;19!UBERON:0006925;2.54e-29;19!UBERON:0002423;2.28e-22;25!UBERON:0002365;4.74e-18;31!UBERON:0002330;4.74e-18;31!UBERON:0002368;1.25e-15;33!UBERON:0000949;2.24e-11;43!UBERON:0005172;2.39e-10;52!UBERON:0005173;2.39e-10;52!UBERON:0002417;3.94e-10;58!UBERON:0000916;3.94e-10;58!UBERON:0001007;4.22e-08;81!UBERON:0001242;9.90e-07;4!UBERON:0001262;9.90e-07;4!UBERON:0004786;9.90e-07;4!UBERON:0004808;9.90e-07;4!UBERON:0001277;9.90e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.54e-29,19;UBERON:0006925,2.54e-29,19;UBERON:0008836,2.54e-29,19;UBERON:0008835,2.26e-25,22;UBERON:0003894,2.26e-25,22;UBERON:0009854,2.76e-24,23;UBERON:0007499,2.28e-22,25;UBERON:0009497,2.28e-22,25;UBERON:0000015,2.28e-22,25;UBERON:0002423,2.28e-22,25;UBERON:0006235,2.28e-22,25;UBERON:0004161,2.28e-22,25;UBERON:0009856,1.61e-21,26;UBERON:0002365,4.26e-18,31;UBERON:0002330,4.26e-18,31;UBERON:0002368,4.66e-16,35;UBERON:0005172,8.93e-15,54;UBERON:0005173,8.93e-15,54;UBERON:0003929,9.15e-15,54;UBERON:0002417,2.66e-13,60;UBERON:0000916,2.66e-13,60;UBERON:0000949,1.54e-12,45;UBERON:0005911,1.01e-09,82;UBERON:0002530,1.33e-09,59;UBERON:0005177,6.92e-08,101;UBERON:0009569,4.22e-07,112;UBERON:0003914,8.59e-07,117 | |||
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|short_description=p3@FGB | |||
}} | }} |
Latest revision as of 06:05, 16 September 2015
Short description: | p3@FGB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FGB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 105bp_to_ENST00000473984_5end |
EntrezGene: | FGB |
HGNC: | 3662 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.09e-17 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.54e-29 | 19 |
digestive gland | 2.54e-29 | 19 |
liver bud | 2.54e-29 | 19 |
hepatic diverticulum | 2.26e-25 | 22 |
liver primordium | 2.26e-25 | 22 |
digestive tract diverticulum | 2.76e-24 | 23 |
epithelial sac | 2.28e-22 | 25 |
epithelium of foregut-midgut junction | 2.28e-22 | 25 |
anatomical boundary | 2.28e-22 | 25 |
hepatobiliary system | 2.28e-22 | 25 |
foregut-midgut junction | 2.28e-22 | 25 |
septum transversum | 2.28e-22 | 25 |
sac | 1.61e-21 | 26 |
exocrine gland | 4.26e-18 | 31 |
exocrine system | 4.26e-18 | 31 |
endocrine gland | 4.66e-16 | 35 |
abdomen element | 8.93e-15 | 54 |
abdominal segment element | 8.93e-15 | 54 |
gut epithelium | 9.15e-15 | 54 |
abdominal segment of trunk | 2.66e-13 | 60 |
abdomen | 2.66e-13 | 60 |
endocrine system | 1.54e-12 | 45 |
endo-epithelium | 1.01e-09 | 82 |
gland | 1.33e-09 | 59 |
trunk region element | 6.92e-08 | 101 |
subdivision of trunk | 4.22e-07 | 112 |
epithelial tube | 8.59e-07 | 117 |