FFCP PHASE1:Hg19::chr16:30102547..30102556,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6911 | |EntrezGene=6911 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11605 | |HGNC=11605 | ||
|TSSclassifier=strong | |||
|UniProt=O95947 | |UniProt=O95947 | ||
|association_with_transcript=13bp_to_ENST00000279386_5end | |association_with_transcript=13bp_to_ENST00000279386_5end | ||
|cluster_id=chr16:30102547..30102556,- | |||
|coexpression_cluster_id=C114 | |coexpression_cluster_id=C114 | ||
|description=CAGE_peak_6_at_TBX6_5end | |description=CAGE_peak_6_at_TBX6_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002322!4.25e-09!5;CL:0000349!2.67e-07!3;CL:0002577!2.67e-07!3 | |ontology_enrichment_celltype=CL:0002322!4.25e-09!5;CL:0000349!2.67e-07!3;CL:0002577!2.67e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002536;1.27e-17;2!CL:0002577;2.07e-12;3!CL:0000349;6.15e-08;19!CL:0002322;6.55e-08;5!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6 | |ontology_enrichment_celltype_v019=CL:0002536;1.27e-17;2!CL:0002577;2.07e-12;3!CL:0000349;6.15e-08;19!CL:0002322;6.55e-08;5!CL:0000540;8.48e-07;6!CL:0000404;8.48e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002536,1.27e-17,2;CL:0002577,2.07e-12,3;CL:0002322,6.13e-08,5;CL:0000349,6.15e-08,19;CL:0000540,8.97e-07,6;CL:0000031,8.97e-07,6;CL:0000404,8.97e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0000358;5.05e-34;1!CL:0000031;8.48e-07;6 | |ontology_enrichment_development_v019=UBERON:0000358;5.05e-34;1!CL:0000031;8.48e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;4.11e-13;24!UBERON:0001987;1.22e-09;4 | |ontology_enrichment_uberon_v019=UBERON:0000478;4.11e-13;24!UBERON:0001987;1.22e-09;4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,4.11e-13,24;UBERON:0005631,1.99e-10,14;UBERON:0000158,1.99e-10,14;UBERON:0001987,1.22e-09,4;UBERON:0004340,1.22e-09,4 | |||
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| ||
|short_description=p6@TBX6 | |short_description=p6@TBX6 | ||
}} | }} |
Latest revision as of 06:33, 16 September 2015
Short description: | p6@TBX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TBX6_5end |
Coexpression cluster: | C114_teratocarcinoma_medulloblastoma_carcinosarcoma_iPS_anaplastic_acute_neuroblastoma |
Association with transcript: | 13bp_to_ENST00000279386_5end |
EntrezGene: | TBX6 |
HGNC: | 11605 |
UniProt: | O95947 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amniotic epithelial cell | 1.27e-17 | 2 |
placental epithelial cell | 2.07e-12 | 3 |
embryonic stem cell | 6.13e-08 | 5 |
extraembryonic cell | 6.15e-08 | 19 |
neuron | 8.97e-07 | 6 |
neuroblast | 8.97e-07 | 6 |
electrically signaling cell | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 4.11e-13 | 24 |
extraembryonic membrane | 1.99e-10 | 14 |
membranous layer | 1.99e-10 | 14 |
placenta | 1.22e-09 | 4 |
allantois | 1.22e-09 | 4 |