FFCP PHASE1:Hg19::chr2:241079761..241079791,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=150677 | |EntrezGene=150677 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=22644 | |HGNC=22644 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NHW6 | |UniProt=Q8NHW6 | ||
|association_with_transcript=0bp_to_BC105085,BC105087_5end | |association_with_transcript=0bp_to_BC105085,BC105087_5end | ||
|cluster_id=chr2:241079761..241079791,- | |||
|coexpression_cluster_id=C30 | |coexpression_cluster_id=C30 | ||
|description=CAGE_peak_3_at_OTOS_5end | |description=CAGE_peak_3_at_OTOS_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000128!8.81e-34!7;CL:0000126!8.81e-34!7;CL:0000127!8.81e-34!7;CL:0002453!8.81e-34!7;CL:0002605!2.40e-29!3;CL:0002319!2.96e-27!25;CL:0000047!2.57e-19!8;CL:0000540!8.52e-15!6;CL:0000031!8.52e-15!6;CL:0000404!8.52e-15!6;CL:0000133!4.48e-14!59;CL:0000243!6.76e-14!15;CL:0000125!6.76e-14!15;CL:0000030!6.76e-14!15;CL:0000339!6.76e-14!15;CL:0002603!1.70e-13!3;CL:0000095!2.01e-12!17;CL:0000123!2.01e-12!17;CL:0000221!1.60e-11!71;CL:0000333!1.65e-07!41 | |ontology_enrichment_celltype=CL:0000128!8.81e-34!7;CL:0000126!8.81e-34!7;CL:0000127!8.81e-34!7;CL:0002453!8.81e-34!7;CL:0002605!2.40e-29!3;CL:0002319!2.96e-27!25;CL:0000047!2.57e-19!8;CL:0000540!8.52e-15!6;CL:0000031!8.52e-15!6;CL:0000404!8.52e-15!6;CL:0000133!4.48e-14!59;CL:0000243!6.76e-14!15;CL:0000125!6.76e-14!15;CL:0000030!6.76e-14!15;CL:0000339!6.76e-14!15;CL:0002603!1.70e-13!3;CL:0000095!2.01e-12!17;CL:0000123!2.01e-12!17;CL:0000221!1.60e-11!71;CL:0000333!1.65e-07!41 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2 | |ontology_enrichment_celltype_v019=CL:0000047;1.07e-17;2 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.82e-27;5 | |ontology_enrichment_development_v019=UBERON:0007123;1.82e-27;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000341;2.84e-66;2!UBERON:0002046;1.82e-27;5!UBERON:0000974;6.07e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002368;4.32e-09;33 | |ontology_enrichment_uberon_v019=UBERON:0000341;2.84e-66;2!UBERON:0002046;1.82e-27;5!UBERON:0000974;6.07e-23;6!UBERON:0000007;1.07e-17;2!UBERON:0003296;1.57e-09;4!UBERON:0010133;1.57e-09;4!UBERON:0002368;4.32e-09;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000341,3.96e-66,2;UBERON:0002046,1.82e-27,5;UBERON:0004117,1.82e-27,5;UBERON:0007689,1.82e-27,5;UBERON:0007123,1.82e-27,5;UBERON:0003091,1.82e-27,5;UBERON:0000007,9.07e-18,2;UBERON:0000974,3.47e-14,10;UBERON:0009722,4.25e-13,11;UBERON:0007690,4.25e-13,11;UBERON:0003296,1.44e-09,4;UBERON:0010133,1.44e-09,4;UBERON:0002368,2.81e-09,35;UBERON:0008814,2.17e-08,18;UBERON:0000949,2.28e-07,45 | |||
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|short_description=p3@OTOS | |short_description=p3@OTOS | ||
}} | }} |
Latest revision as of 07:16, 16 September 2015
Short description: | p3@OTOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_OTOS_5end |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | 0bp_to_BC105085, BC105087_5end |
EntrezGene: | OTOS |
HGNC: | 22644 |
UniProt: | Q8NHW6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
throat | 3.96e-66 | 2 |
thyroid gland | 1.82e-27 | 5 |
pharyngeal pouch | 1.82e-27 | 5 |
thyroid diverticulum | 1.82e-27 | 5 |
pharyngeal pouch 2 | 1.82e-27 | 5 |
thyroid primordium | 1.82e-27 | 5 |
pituitary gland | 9.07e-18 | 2 |
neck | 3.47e-14 | 10 |
entire pharyngeal arch endoderm | 4.25e-13 | 11 |
early pharyngeal endoderm | 4.25e-13 | 11 |
gland of diencephalon | 1.44e-09 | 4 |
neuroendocrine gland | 1.44e-09 | 4 |
endocrine gland | 2.81e-09 | 35 |
pharyngeal arch system | 2.17e-08 | 18 |
endocrine system | 2.28e-07 | 45 |