FFCP PHASE1:Hg19::chr1:115300592..115300620,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7812 | |EntrezGene=7812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29905 | |HGNC=29905 | ||
|TSSclassifier=strong | |||
|UniProt=E9PNG3 | |UniProt=E9PNG3 | ||
|association_with_transcript=0bp_to_ENST00000261443,ENST00000339438,ENST00000524652,ENST00000525970,ENST00000529046,ENST00000533818,ENST00000534699_5end | |association_with_transcript=0bp_to_ENST00000261443,ENST00000339438,ENST00000524652,ENST00000525970,ENST00000529046,ENST00000533818,ENST00000534699_5end | ||
|cluster_id=chr1:115300592..115300620,- | |||
|description=CAGE_peak_1_at_CSDE1_5end | |description=CAGE_peak_1_at_CSDE1_5end | ||
|id=chr1:115300592..115300620,- | |id=chr1:115300592..115300620,- | ||
|ontology_enrichment_celltype=CL:0000766!7.54e-11!76;CL:0000763!1.22e-10!112;CL:0000049!1.22e-10!112;CL:0000860!2.05e-10!45;CL:0002057!3.43e-10!42;CL:0000839!9.75e-10!70;CL:0002320!4.04e-09!365;CL:0000134!5.91e-09!358;CL:0002194!1.91e-08!63;CL:0000576!1.91e-08!63;CL:0000040!1.91e-08!63;CL:0000559!1.91e-08!63;CL:0000557!1.96e-08!71;CL:0002009!3.35e-08!65;CL:0000738!3.14e-07!140;CL:0002032!4.52e-07!165;CL:0000837!4.52e-07!165;CL:0000037!4.57e-07!172;CL:0000566!4.57e-07!172;CL:0000219!5.32e-07!390 | |ontology_enrichment_celltype=CL:0000766!7.54e-11!76;CL:0000763!1.22e-10!112;CL:0000049!1.22e-10!112;CL:0000860!2.05e-10!45;CL:0002057!3.43e-10!42;CL:0000839!9.75e-10!70;CL:0002320!4.04e-09!365;CL:0000134!5.91e-09!358;CL:0002194!1.91e-08!63;CL:0000576!1.91e-08!63;CL:0000040!1.91e-08!63;CL:0000559!1.91e-08!63;CL:0000557!1.96e-08!71;CL:0002009!3.35e-08!65;CL:0000738!3.14e-07!140;CL:0002032!4.52e-07!165;CL:0000837!4.52e-07!165;CL:0000037!4.57e-07!172;CL:0000566!4.57e-07!172;CL:0000219!5.32e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-10;33!CL:0002057;4.56e-10;33!CL:0000473;5.55e-07;39!CL:0000234;5.55e-07;39!CL:0000576;6.11e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.82e-11,72;CL:0000763,1.72e-10,108;CL:0000049,1.72e-10,108;CL:0000860,3.43e-10,42;CL:0002057,3.43e-10,42;CL:0000839,1.15e-09,66;CL:0002320,4.23e-09,361;CL:0000134,6.16e-09,354;CL:0000473,1.60e-08,48;CL:0000234,1.60e-08,48;CL:0002194,2.28e-08,59;CL:0000576,2.28e-08,59;CL:0000040,2.28e-08,59;CL:0000559,2.28e-08,59;CL:0000557,2.47e-08,67;CL:0002009,4.11e-08,61;CL:0000738,4.71e-07,136;CL:0000219,5.66e-07,386;CL:0002032,6.84e-07,161;CL:0000837,6.84e-07,161;CL:0000037,6.95e-07,168 | |||
|ontology_enrichment_development_v019=CL:0002057;9.46e-08;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!2.52e-08!375;UBERON:0002390!7.39e-07!102;UBERON:0003061!7.39e-07!102 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,2.65e-08,371;UBERON:0004765,4.82e-07,90 | |||
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2664,288.425346215941,453.604416609075 | ||
|short_description=p1@CSDE1 | |short_description=p1@CSDE1 | ||
}} | }} |
Latest revision as of 07:28, 16 September 2015
Short description: | p1@CSDE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSDE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000261443, ENST00000339438, ENST00000524652, ENST00000525970, ENST00000529046, ENST00000533818, ENST00000534699_5end |
EntrezGene: | CSDE1 |
HGNC: | 29905 |
UniProt: | E9PNG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.82e-11 | 72 |
myeloid cell | 1.72e-10 | 108 |
common myeloid progenitor | 1.72e-10 | 108 |
classical monocyte | 3.43e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.43e-10 | 42 |
myeloid lineage restricted progenitor cell | 1.15e-09 | 66 |
connective tissue cell | 4.23e-09 | 361 |
mesenchymal cell | 6.16e-09 | 354 |
defensive cell | 1.60e-08 | 48 |
phagocyte | 1.60e-08 | 48 |
monopoietic cell | 2.28e-08 | 59 |
monocyte | 2.28e-08 | 59 |
monoblast | 2.28e-08 | 59 |
promonocyte | 2.28e-08 | 59 |
granulocyte monocyte progenitor cell | 2.47e-08 | 67 |
macrophage dendritic cell progenitor | 4.11e-08 | 61 |
leukocyte | 4.71e-07 | 136 |
motile cell | 5.66e-07 | 386 |
hematopoietic oligopotent progenitor cell | 6.84e-07 | 161 |
hematopoietic multipotent progenitor cell | 6.84e-07 | 161 |
hematopoietic stem cell | 6.95e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 2.65e-08 | 371 |
skeletal element | 4.82e-07 | 90 |