FFCP PHASE1:Hg19::chrX:7077601..7077607,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=412 | |EntrezGene=412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11425 | |HGNC=11425 | ||
|TSSclassifier=strong | |||
|UniProt=Q0W975 | |UniProt=Q0W975 | ||
|association_with_transcript=-146bp_to_AM282552_5end | |association_with_transcript=-146bp_to_AM282552_5end | ||
|cluster_id=chrX:7077601..7077607,+ | |||
|description=CAGE_peak_17_at_STS_5end | |description=CAGE_peak_17_at_STS_5end | ||
|id=chrX:7077601..7077607,+ | |id=chrX:7077601..7077607,+ | ||
|ontology_enrichment_celltype=CL:0000499!1.70e-20!27;CL:0000327!1.65e-12!14;CL:0000153!1.91e-09!9;CL:0000447!1.91e-09!9;CL:0000667!1.37e-08!6;CL:0000058!1.37e-08!6;CL:0000138!1.37e-08!6;CL:0002149!4.59e-08!6;CL:0002255!4.59e-08!6;CL:0000135!7.64e-08!3;CL:0000386!7.64e-08!3;CL:0000388!7.64e-08!3;CL:0000708!2.42e-07!3 | |ontology_enrichment_celltype=CL:0000499!1.70e-20!27;CL:0000327!1.65e-12!14;CL:0000153!1.91e-09!9;CL:0000447!1.91e-09!9;CL:0000667!1.37e-08!6;CL:0000058!1.37e-08!6;CL:0000138!1.37e-08!6;CL:0002149!4.59e-08!6;CL:0002255!4.59e-08!6;CL:0000135!7.64e-08!3;CL:0000386!7.64e-08!3;CL:0000388!7.64e-08!3;CL:0000708!2.42e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;4.53e-43;6!CL:0000153;4.88e-29;9!CL:0000447;4.88e-29;9!CL:0000327;9.02e-18;15!CL:0002564;1.04e-10;3!CL:0000499;7.24e-10;28!CL:0002327;2.35e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,3.65e-43,6;CL:0000138,3.65e-43,6;CL:0000153,4.23e-29,9;CL:0000447,4.23e-29,9;CL:0000327,8.28e-18,15;CL:0002564,1.09e-10,3;CL:0000499,6.91e-10,28;CL:0002327,2.26e-08,4;CL:0000151,7.77e-08,36 | |||
|ontology_enrichment_development_v019=UBERON:0008425;2.73e-29;1 | |||
|ontology_enrichment_disease=DOID:3001!4.59e-08!6 | |||
|ontology_enrichment_disease_v019=DOID:5093;2.35e-08;4!DOID:1612;2.35e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.26e-08,4;DOID:1612,2.26e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.16e-34!9;UBERON:0001557!1.45e-15!19;UBERON:0008947!5.63e-09!38;UBERON:0003258!5.63e-09!38;UBERON:0000043!7.64e-08!3;UBERON:0003210!2.42e-07!3 | |ontology_enrichment_uberon=UBERON:0001737!3.16e-34!9;UBERON:0001557!1.45e-15!19;UBERON:0008947!5.63e-09!38;UBERON:0003258!5.63e-09!38;UBERON:0000043!7.64e-08!3;UBERON:0003210!2.42e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002242;1.04e-10;3!UBERON:0001911;2.35e-08;4!UBERON:0011135;6.21e-07;5!UBERON:0002216;6.21e-07;5!UBERON:0011134;6.21e-07;5!UBERON:0002209;6.21e-07;5!UBERON:0002213;6.21e-07;5!UBERON:0007844;6.21e-07;5!UBERON:0011138;6.21e-07;5!UBERON:0001130;6.21e-07;5!UBERON:0001066;6.21e-07;5!UBERON:0001468;6.21e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002242,1.09e-10,3;UBERON:0003068,1.09e-10,3;UBERON:0002328,1.09e-10,3;UBERON:0004880,1.09e-10,3;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4;UBERON:0011135,6.39e-07,5;UBERON:0002216,6.39e-07,5;UBERON:0011134,6.39e-07,5;UBERON:0002209,6.39e-07,5;UBERON:0002213,6.39e-07,5;UBERON:0005856,6.39e-07,5;UBERON:0005866,6.39e-07,5;UBERON:0005863,6.39e-07,5;UBERON:0007844,6.39e-07,5;UBERON:0011138,6.39e-07,5;UBERON:0001130,6.39e-07,5;UBERON:0001066,6.39e-07,5;UBERON:0001468,6.39e-07,5 | |||
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|short_description=p17@STS | |short_description=p17@STS | ||
}} | }} |
Latest revision as of 07:32, 16 September 2015
Short description: | p17@STS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_STS_5end |
Coexpression cluster: | NA |
Association with transcript: | -146bp_to_AM282552_5end |
EntrezGene: | STS |
HGNC: | 11425 |
UniProt: | Q0W975 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 3.65e-43 | 6 |
chondrocyte | 3.65e-43 | 6 |
GAG secreting cell | 4.23e-29 | 9 |
carbohydrate secreting cell | 4.23e-29 | 9 |
extracellular matrix secreting cell | 8.28e-18 | 15 |
nucleus pulposus cell of intervertebral disc | 1.09e-10 | 3 |
stromal cell | 6.91e-10 | 28 |
mammary gland epithelial cell | 2.26e-08 | 4 |
secretory cell | 7.77e-08 | 36 |
Ontology term | p-value | n |
---|---|---|
nucleus pulposus | 1.09e-10 | 3 |
axial mesoderm | 1.09e-10 | 3 |
notochord | 1.09e-10 | 3 |
chordamesoderm | 1.09e-10 | 3 |
mammary gland | 2.26e-08 | 4 |
mammary bud | 2.26e-08 | 4 |
mammary ridge | 2.26e-08 | 4 |
mammary placode | 2.26e-08 | 4 |
intervertebral cartilage | 6.39e-07 | 5 |
symphysis | 6.39e-07 | 5 |
nonsynovial joint | 6.39e-07 | 5 |
fibrous joint | 6.39e-07 | 5 |
cartilaginous joint | 6.39e-07 | 5 |
developing mesenchymal condensation | 6.39e-07 | 5 |
pre-cartilage condensation | 6.39e-07 | 5 |
cartilaginous condensation | 6.39e-07 | 5 |
cartilage element | 6.39e-07 | 5 |
post-cranial axial skeletal system | 6.39e-07 | 5 |
vertebral column | 6.39e-07 | 5 |
intervertebral disk | 6.39e-07 | 5 |
intervertebral joint | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.26e-08 | 4 |
breast cancer | 2.26e-08 | 4 |