FFCP PHASE2:Hg19::chr20:42984073..42984085,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3172 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:5024 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=5024 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 07:54, 16 September 2015
Short description: | p5@HNF4A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HNF4A_5end |
Coexpression cluster: | NA |
Association with transcript: | -254bp_to_ENST00000316673_5end |
EntrezGene: | HNF4A |
HGNC: | 5024 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@HNF4A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.25e-15 | 12 |
endodermal cell | 2.57e-15 | 58 |
intestinal epithelial cell | 7.70e-13 | 4 |
germ line cell | 1.25e-07 | 7 |
germ cell | 1.25e-07 | 7 |
epithelial cell of large intestine | 2.74e-07 | 2 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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intestine | 1.81e-16 | 17 |
gastrointestinal system | 4.04e-16 | 25 |
rectum | 5.39e-13 | 4 |
intestinal mucosa | 7.70e-13 | 4 |
wall of intestine | 7.70e-13 | 4 |
gastrointestinal system mucosa | 7.70e-13 | 4 |
gastrointestinal system epithelium | 7.70e-13 | 4 |
intestinal epithelium | 7.70e-13 | 4 |
lower digestive tract | 1.40e-10 | 5 |
subdivision of digestive tract | 1.68e-10 | 118 |
Showing 1 to 10 of 33 entries
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.23e-14 | 14 |
carcinoma | 7.05e-12 | 106 |
cell type cancer | 2.02e-08 | 143 |
adenocarcinoma | 8.08e-08 | 25 |
tubular adenocarcinoma | 2.43e-07 | 2 |
Showing 1 to 5 of 5 entries