FFCP PHASE2:Hg19::chr10:111967331..111967336,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:4601 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:7534 |TSSclass...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=4601 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=7534 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=P50539 | ||
|association_with_transcript=-26bp_to_ENST00000332674,NM_130439,uc001kyy.2_5end | |association_with_transcript=-26bp_to_ENST00000332674,NM_130439,uc001kyy.2_5end | ||
|cluster_id=chr10:111967331..111967336,+ | |cluster_id=chr10:111967331..111967336,+ | ||
Latest revision as of 08:07, 16 September 2015
| Short description: | p10@MXI1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_10_at_MXI1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | -26bp_to_ENST00000332674, NM_130439, uc001kyy.2_5end |
| EntrezGene: | MXI1 |
| HGNC: | 7534 |
| UniProt: | P50539 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p10@MXI1 |
|---|
0.0
1.0
2.0
3.0
4.0
5.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| segmental subdivision of nervous system | 1.25e-23 | 13 |
| segmental subdivision of hindbrain | 4.67e-18 | 12 |
| hindbrain | 4.67e-18 | 12 |
| presumptive hindbrain | 4.67e-18 | 12 |
| regional part of metencephalon | 7.02e-16 | 9 |
| metencephalon | 7.02e-16 | 9 |
| future metencephalon | 7.02e-16 | 9 |
| posterior neural tube | 1.99e-14 | 15 |
| chordal neural plate | 1.99e-14 | 15 |
| cerebellum | 5.62e-14 | 6 |
Showing 1 to 10 of 36 entries
