FFCP PHASE1:Hg19::chr2:113483700..113483732,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=284958 | |EntrezGene=284958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=27678 | |HGNC=27678 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-87bp_to_ENST00000462854_5end | |association_with_transcript=-87bp_to_ENST00000462854_5end | ||
|cluster_id=chr2:113483700..113483732,+ | |||
|description=CAGE_peak_1_at_NT5DC4_5end | |description=CAGE_peak_1_at_NT5DC4_5end | ||
|id=chr2:113483700..113483732,+ | |id=chr2:113483700..113483732,+ | ||
|ontology_enrichment_celltype=CL:0000182;7.00e-07;12 | |ontology_enrichment_celltype=CL:0000066!1.18e-15!254;CL:0000223!8.49e-12!59;CL:0002251!1.40e-07!21;CL:0002076!9.18e-07!43 | ||
| | |ontology_enrichment_celltype_v019=CL:0000182;7.00e-07;12 | ||
|ontology_enrichment_disease=DOID:299;3.04e-12;25!DOID:3493;5.63e-12;2!DOID:1749;7.40e-09;14!DOID:305;1.22e-07;106!DOID:3111;8.34e-07;1!DOID:3603;8.34e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000223,4.88e-12,58;CL:0000066,1.16e-09,253;CL:0000182,6.42e-07,12 | ||
|ontology_enrichment_uberon=UBERON:0005409;5.00e-10;22!UBERON:0000160;1.37e-09;17!UBERON:0000344;9.99e-09;20!UBERON:0002114;1.69e-07;2!UBERON:0002423;8.95e-07;25 | |ontology_enrichment_development_v019=UBERON:0009497;1.26e-09;13!UBERON:0009117;1.81e-08;10!UBERON:0005564;1.81e-08;10!CL:0000223;6.82e-08;58!UBERON:0004161;1.68e-07;11!UBERON:0001041;1.98e-07;30 | ||
|ontology_enrichment_disease=DOID:305!8.27e-25!106;DOID:1749!2.45e-18!14;DOID:0050687!7.12e-18!143;DOID:299!3.06e-11!25;DOID:162!1.39e-10!235;DOID:14566!4.43e-10!239 | |||
|ontology_enrichment_disease_v019=DOID:299;3.04e-12;25!DOID:3493;5.63e-12;2!DOID:1749;7.40e-09;14!DOID:305;1.22e-07;106!DOID:3111;8.34e-07;1!DOID:3603;8.34e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.66e-20,106;DOID:0050687,1.29e-13,143;DOID:299,3.09e-12,25;DOID:3493,5.64e-12,2;DOID:1749,7.34e-09,14;DOID:162,7.84e-09,235;DOID:14566,1.56e-08,239;DOID:3111,8.34e-07,1;DOID:3603,8.34e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!1.82e-12!12;UBERON:0005409!1.72e-10!35;UBERON:0004119!2.75e-10!169;UBERON:0000925!2.75e-10!169;UBERON:0006595!2.75e-10!169;UBERON:0001007!5.84e-10!155;UBERON:0001555!5.84e-10!155;UBERON:0007026!5.84e-10!155;UBERON:0003729!1.52e-09!5;UBERON:0000466!1.52e-09!126;UBERON:0004921!4.24e-09!129;UBERON:0004185!4.24e-09!129;UBERON:0003343!2.43e-08!4;UBERON:0004785!2.43e-08!4;UBERON:0000077!3.33e-08!130;UBERON:0000945!3.71e-08!8;UBERON:0010039!3.71e-08!8;UBERON:0004923!2.08e-07!57;UBERON:0005177!3.08e-07!107;UBERON:0001041!3.23e-07!98;UBERON:0005172!9.74e-07!55;UBERON:0005173!9.74e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;5.00e-10;22!UBERON:0000160;1.37e-09;17!UBERON:0000344;9.99e-09;20!UBERON:0002114;1.69e-07;2!UBERON:0002423;8.95e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.07e-11,25;UBERON:0004921,8.73e-10,118;UBERON:0000160,1.43e-09,17;UBERON:0007499,4.85e-09,25;UBERON:0000344,1.09e-08,20;UBERON:0009856,1.17e-08,26;UBERON:0001007,2.53e-08,145;UBERON:0001555,2.53e-08,145;UBERON:0007026,2.53e-08,145;UBERON:0004119,3.86e-08,160;UBERON:0000925,3.86e-08,160;UBERON:0006595,3.86e-08,160;UBERON:0008835,8.03e-08,22;UBERON:0003894,8.03e-08,22;UBERON:0002114,1.48e-07,2;UBERON:0009854,1.87e-07,23;UBERON:0009497,8.25e-07,25;UBERON:0000015,8.25e-07,25;UBERON:0002423,8.25e-07,25;UBERON:0006235,8.25e-07,25;UBERON:0004161,8.25e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81404456212093,3.69452652524756,5.35233312933019,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1919479074233,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0,0,0.447792613514241,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,0,0,0,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.509752546090077,5.81753206250107,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,6.15424027305347,0,0.808815160325942,8.59301638442924,0,0,0,0,0,0,0,0,0,0,1.593108275997,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,4.08082020397869,3.1097675715467,0,0,0,1.22206028986725,0,0,0,0,0,0,0,1.56531695145672,0.971121518136371,0,0,0,0,0.60129367765797,0,0,0,0,0,4.55375273647668,0,0,0.685946781900644,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1239873818635,2.83619456306005,1.97798060114799,2.2243169471881,0.295282444544246,0,0,0,0,0,0,0,0,0,0.670869375198532,0.157611414598396,0.314727528809989,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,24.5122063096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2629311690759,0.707818340086442,0.183428598521679,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0,3.99211432786022,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57236873471653,2.99608367645026,0,0,0,0,0,0,0,8.40816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,9.84327799820572,58.3993890010696,19.1411142222163,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0.874238242015829,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,5.99646935549574,0,3.17605384544123,16.208756071212,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,1.01988829741982,0.26721740526556,4.41095517767256,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,2.19788825249631,0,0,0,0,0,0,0,0,0.641136984606466 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.81404456212093,3.69452652524756,5.35233312933019,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0,0,0.645484683583826,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.1919479074233,0,0.439001141634502,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0.790204397959275,0.858486162094873,0,0,0,0.93733833986777,0,0,0.447792613514241,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.80125358039787,0,0,0,0,0,0.451199612907412,0.231046011313244,0,1.46139224653261,0.105551628892876,0,0,0,0,0,0,0.509752546090077,5.81753206250107,0,0,0,0.256450125116389,0,0,0.9273691048295,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0.296964680832639,0.614321404198464,0,0,0,0,0,0,0,0,0,6.15424027305347,0,0.808815160325942,8.59301638442924,0,0,0,0,0,0,0,0,0,0,1.593108275997,1.27126825146383,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.108647371922008,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0.421996129056054,4.08082020397869,3.1097675715467,0,0,0,1.22206028986725,0,0,0,0,0,0,0,1.56531695145672,0.971121518136371,0,0,0,0,0.60129367765797,0,0,0,0,0,4.55375273647668,0,0,0.685946781900644,0.34823682632161,0,0,0,0,0,0,0,0,0,0,0,0,0.320635281006135,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1239873818635,2.83619456306005,1.97798060114799,2.2243169471881,0.295282444544246,0,0,0,0,0,0,0,0,0,0.670869375198532,0.157611414598396,0.314727528809989,0,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,1.25643277000187,0,0,0,0,0,0,0,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,24.5122063096007,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.2629311690759,0.707818340086442,0.183428598521679,1.27078232765372,0,0,0,0,0,0,0.523813388962845,0,3.99211432786022,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57236873471653,2.99608367645026,0,0,0,0,0,0,0,8.40816489941367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,9.84327799820572,58.3993890010696,19.1411142222163,0,0,0,0,0,0,0,0,0,0.301925687133347,0,0.874238242015829,0,0,0,0,0,0,0,0.187967835959707,0.128915775947154,5.99646935549574,0,3.17605384544123,16.208756071212,0.730336388246517,0,0,0,0,0,1.5870805215462,0,0,0,0,0,0,1.01988829741982,0.26721740526556,4.41095517767256,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.0717222053926763,0,2.19788825249631,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p1@NT5DC4 | |short_description=p1@NT5DC4 | ||
}} | }} |
Latest revision as of 09:21, 16 September 2015
Short description: | p1@NT5DC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NT5DC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -87bp_to_ENST00000462854_5end |
EntrezGene: | NT5DC4 |
HGNC: | 27678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 4.88e-12 | 58 |
epithelial cell | 1.16e-09 | 253 |
hepatocyte | 6.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.07e-11 | 25 |
subdivision of digestive tract | 8.73e-10 | 118 |
intestine | 1.43e-09 | 17 |
epithelial sac | 4.85e-09 | 25 |
mucosa | 1.09e-08 | 20 |
sac | 1.17e-08 | 26 |
digestive system | 2.53e-08 | 145 |
digestive tract | 2.53e-08 | 145 |
primitive gut | 2.53e-08 | 145 |
endoderm-derived structure | 3.86e-08 | 160 |
endoderm | 3.86e-08 | 160 |
presumptive endoderm | 3.86e-08 | 160 |
hepatic diverticulum | 8.03e-08 | 22 |
liver primordium | 8.03e-08 | 22 |
duodenum | 1.48e-07 | 2 |
digestive tract diverticulum | 1.87e-07 | 23 |
epithelium of foregut-midgut junction | 8.25e-07 | 25 |
anatomical boundary | 8.25e-07 | 25 |
hepatobiliary system | 8.25e-07 | 25 |
foregut-midgut junction | 8.25e-07 | 25 |
septum transversum | 8.25e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.66e-20 | 106 |
cell type cancer | 1.29e-13 | 143 |
adenocarcinoma | 3.09e-12 | 25 |
signet ring cell adenocarcinoma | 5.64e-12 | 2 |
squamous cell carcinoma | 7.34e-09 | 14 |
cancer | 7.84e-09 | 235 |
disease of cellular proliferation | 1.56e-08 | 239 |
cystadenocarcinoma | 8.34e-07 | 1 |
mucinous cystadenocarcinoma | 8.34e-07 | 1 |