FFCP PHASE1:Hg19::chr19:16606944..16606963,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=125972 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20407 | |||
|TSSclassifier=strong | |||
|UniProt=Q96L12 | |||
|association_with_transcript=39bp_to_ENST00000269881,NM_145046,uc002ned.2_5end | |||
|cluster_id=chr19:16606944..16606963,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_CALR3_5end | |||
|id=chr19:16606944..16606963,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002262;2.40e-08;2!CL:1000398;2.40e-08;2!CL:0002363;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002262,2.15e-08,2;CL:1000398,2.15e-08,2;CL:0002363,2.87e-08,2;CL:0000008,2.87e-08,2 | |||
|ontology_enrichment_development_v019=CL:0000008;2.40e-08;2!UBERON:0009117;9.22e-07;10!UBERON:0005564;9.22e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5093;3.18e-15;4!DOID:1612;3.18e-15;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,2.56e-15,4;DOID:1612,2.56e-15,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001281;2.40e-08;2!UBERON:0003497;2.40e-08;2!UBERON:0003909;2.40e-08;2!UBERON:0003566;2.40e-08;2!UBERON:0003835;2.40e-08;2!UBERON:0001777;2.40e-08;2!UBERON:0000473;3.04e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001281,2.15e-08,2;UBERON:0003497,2.15e-08,2;UBERON:0003909,2.15e-08,2;UBERON:0003835,2.15e-08,2;UBERON:0003566,2.87e-08,2;UBERON:0001777,2.87e-08,2;UBERON:0000473,3.04e-08,8 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0.522371256399677,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.251085279189606,0.687720651731561,0.328402357799783,0.157421562627358,0.393364276848904,0,0.154816123316076,0.919421224478927,0.90361775633475,0.739508020333575,0.154934401160603,0.568676929949686,0,0,0,0,0.223915474239924,0.32389366601898,0,0.436194716338694,0.377875943688809,0.485168122375632,0,0,0,0,0,0,0.344745680736619,0,1.35426486594342,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0.426224750532694,0,0,0,0,0.521482918420201,0.434377689410233,0.605399502633369,0,0,0,0.212604299965044,0,0,0,0,0,0.19891667719909,0,0,0,0.889509253863555,0.426730222566507,0.400395987036012,0.574752439954483,0,1.90810750907073,0,0,0,0,0,0,0.196709770113833,0.393010762749165,0,0,0.32592226663359,0,0,0.222820913770347,0,0,0.270803863765016,0.128091319725675,0.130059347559878,0.822189523018381,0,0,0.296573126324121,0,1.04535523804977,0.113309342697566,0,0,0,0,0,0.950452044448374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0.443458794925128,0.087834785693126,2.68507104770311,0.364295288292542,0,0,0.174129737299267,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0.436094052142534,0,0,0.132409180813219,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0.718618141816238,0.168336113954066,0,0,0,0,0,0,0,0.427114777637135,0,0,0,0,0,0,0.0974370051611986,0,0,0.161646056818812,0,0,0,0,0.272746120590835,0.286804595389004,0.243947412259191,0.265059536642971,0.348581828608555,0.310983165046111,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0.723033089650446,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,1.40241773803446,0,0,0,0,0,0,0.245976877086227,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,1.03993478527958,0,0.231860809950154,0,0.288732895522148,0,0,3.95102198979638,1.71697232418975,0,0.234004265139238,0.148631162288728,0,0.335964256397719,0,0,0,0,0,0.352193736052904,0.207328115540772,0,0.12624243342638,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,3.57656445851882,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0.179060963239896,0,0.197030760201927,0.215627574859517,0,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0,0,0.117141414992713,0,0,1.03473071292505,0,0.184369168541703,0,0.195801157462741,0,0.413536052245775,0.215714200818617,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0.120859449591622,0,0.0920809889358963,0,0,0,0,0.15403067420883,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0.256450125116389,0.328014645699706,0,0.103041011647722,0.27470839445503,0.165018999841176,0,0,0,0,0.154048617114644,0.307007349452259,0.413509717453592,0.107420244868274,0,0.170453254832202,0,0,0,0.510450849978337,0,0,0,0,0,0,0,0.18532421910392,0,0.372158369359667,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0,0.569647187174163,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0.245040215981032,0.371606350251437,0.144269212976445,0.142283686696828,0.478278818186467,0,0,0.211673582723883,0.324621940274555,0,0.228234679033192,0,0,0,0.1605880751037,0.403599414382095,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0.18714054040822,0,0,0.445773537109913,0,0,0,0,0,0.281338832821026,0,0.824019371133798,0,0,0.552567831062295,0,0,0.246169610922139,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0.221158519862449,0,0,0.21787692703798,0,0,0.227884111694002,0.23056390438806,0.269272933229316,0.54323685961004,0,0.0915975934018623,0,0,0,0,0.225595660617181,0.19606253431774,0.167821586975843,0.37950746544837,0,0,0,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0,0,0.104421949505455,0.067401132980677,0.802577647298789,0,0.182454789215666,0,0,0,0,0.61214552326098,0,2.1045278718029,0.518440956986236,0,0,0,0,0,0,0,0.195984794828755,0,0.873633341210151,0.171986032471617,0.580537987734511,0.438535902517113,0.656923656425674,0,0.0882561266915003,0,0,0.397429223405979,0,0,0,0,0,0.288180834308212,0.229073192331831,0.171594997861965,0.288109595976299,0.248505071130865,0,0,0,0,0,0,0.410716136675979,0,0,0.262887354279314,0,0,0,0.199679000498991,0,0,0.134366944973453,0,0,0.236349546921671,0.164831716762333,0.13480708770837,0.0984274815147488,0.254019996197353,0,0,0.160753148465019,0.275078873194468,1.24632101408756,0.449947783103001,0.77380195455795,0.121499113316049,0,0,0.104909176269996,0,0,0.191915197319445,0,0,0.5085370753095,0,0,0,0,0.164185041498678,0,0.226624183040251,0,0,0,0.1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| |||
|short_description=p3@CALR3 | |||
}} |
Latest revision as of 10:08, 16 September 2015
Short description: | p3@CALR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CALR3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 39bp_to_ENST00000269881, NM_145046, uc002ned.2_5end |
EntrezGene: | CALR3 |
HGNC: | 20407 |
UniProt: | Q96L12 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of sinusoid | 2.15e-08 | 2 |
endothelial cell of hepatic sinusoid | 2.15e-08 | 2 |
keratocyte | 2.87e-08 | 2 |
migratory cranial neural crest cell | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
hepatic sinusoid | 2.15e-08 | 2 |
abdomen blood vessel | 2.15e-08 | 2 |
sinusoid | 2.15e-08 | 2 |
abdominal segment blood vessel | 2.15e-08 | 2 |
head connective tissue | 2.87e-08 | 2 |
substantia propria of cornea | 2.87e-08 | 2 |
testis | 3.04e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 2.56e-15 | 4 |
breast cancer | 2.56e-15 | 4 |