FFCP PHASE1:Hg19::chr12:112443767..112443827,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:112443767..112443827,-
|short_description=p3@TMEM116
|description=CAGE_peak_3_at_TMEM116_5end
|association_with_transcript=0bp_to_ENST00000546962,ENST0000...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=89894 | |EntrezGene=89894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25084 | |HGNC=25084 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1L7,F8VQZ8 | |UniProt=F8W1L7,F8VQZ8 | ||
|association_with_transcript=0bp_to_ENST00000546962,ENST00000550233,ENST00000550800_5end | |||
|cluster_id=chr12:112443767..112443827,- | |||
|description=CAGE_peak_3_at_TMEM116_5end | |||
|id=chr12:112443767..112443827,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.39e-09;4!UBERON:0007284;1.39e-09;4!UBERON:0008947;1.81e-07;29 | |||
|ontology_enrichment_disease=DOID:305!2.66e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:114;9.63e-10;2!DOID:1036;1.02e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.24e-10,2;DOID:1036,9.71e-09,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.06e-18!115;UBERON:0001007!1.84e-08!155;UBERON:0001555!1.84e-08!155;UBERON:0007026!1.84e-08!155;UBERON:0001004!6.00e-08!72;UBERON:0004921!3.68e-07!129;UBERON:0004185!3.68e-07!129;UBERON:0004119!9.32e-07!169;UBERON:0000925!9.32e-07!169;UBERON:0006595!9.32e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.27e-12;3!UBERON:0000946;1.27e-12;3!UBERON:0007100;1.55e-09;25!UBERON:0001829;2.06e-09;2!UBERON:0003127;1.23e-08;2!UBERON:0002133;1.23e-08;2!UBERON:0001044;5.91e-07;6!UBERON:0003293;5.91e-07;6!UBERON:0003294;5.91e-07;6!UBERON:0010047;5.91e-07;6!UBERON:0003408;5.91e-07;6!UBERON:0000167;5.91e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.66e-12,3;UBERON:0009751,1.66e-12,3;UBERON:0000946,1.66e-12,3;UBERON:0002523,1.66e-12,3;UBERON:0005983,1.66e-12,3;UBERON:0002165,1.66e-12,3;UBERON:0002062,1.66e-12,3;UBERON:0007280,1.66e-12,3;UBERON:0007023,3.58e-12,114;UBERON:0001829,2.15e-09,2;UBERON:0007100,1.06e-08,27;UBERON:0003127,1.19e-08,2;UBERON:0002133,1.56e-08,2;UBERON:0003103,1.73e-07,68;UBERON:0001044,5.97e-07,6;UBERON:0003293,5.97e-07,6;UBERON:0003294,5.97e-07,6;UBERON:0010047,5.97e-07,6;UBERON:0000167,5.97e-07,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,2.55507742614196,0,0.307240764308458,1.56573275524691,1.00109485027145,0,0.278406173895242,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0.123084805461069,0,0,8.41399520975363,0,0.295930216910801,0,0,0,0.0927680981618513,1.99613798001194,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.87754158861589,0.762569244632931,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,6.54227415789824,9.60706418156924,6.20939871810618,4.74384331810463,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,4.68825091867698,4.27721101453538,0.296521128680622,0.123563938946503,0,1.95463285643963,0.802577647298789,0,0.182454789215666,0.19566461893209,0,2.36750641709634,0,0,0,0.751617097072463,0.207376382794494,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0.967563312890852,0.438535902517113,0.246346371159628,0.581934098930517,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0,1.11712960508902,8.02061484040893,1.43574604915363,5.19165401297377,15.8813637810531,7.81100101046554,13.3023275523718,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,20.1742610685947,7.97309739651971,0,0.35857467866569,0,0.714695326373367,9.26928758511604,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.513260513652988,0,3.20362237703084,1.88645166119599,1.65695622138878,0,0,0,0,0,0,0,0,2.19875734750328,0,0,0,10.3213655224213,2.66229723688445,0.745156835296601,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,2.56241518587947,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2108442174239,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.825788063434183,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0.546974809018219,4.38606213485746,0,0,0.766574565837572,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0.230467975111559,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,9.24898138935504,0,0,0,0.214429632529969,0,0,0,0,0,0,0,12.4765934057881,0.118332000730565,0,2.54032230114557,0,0,0,0.111855431797792,0,0.975343399858155,0.647428837187895,0,0,1.94284397223656,0.467878926924211,0,0,1.58124514854544,0,1.96251696636676,12.4250394553791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,2.92134555298607,5.04602211744995,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.250707539292375,0.151557396436479,0,0,0.103432995861895,1.0661699095049,0.952257725854961,0.193766729508018,0.124149428591716,0,0.954707374172474,1.41482032270754,0.217716747896961,0.342233301085281,0.471464371102113,1.93649954560226,1.33064142618405,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,2.16115474571226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0.132529768321485,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0.591534000199219,0.168584690078102,0,0.110293972732394,0.217879444092406,0,0.134831308160164,0.588664395376038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,2.55507742614196,0,0.307240764308458,1.56573275524691,1.00109485027145,0,0.278406173895242,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0.211125408127993,0.597743964753209,0.552567831062295,0,0,0.123084805461069,0,0,8.41399520975363,0,0.295930216910801,0,0,0,0.0927680981618513,1.99613798001194,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.87754158861589,0.762569244632931,0,0,0,0,0,0.325942115766024,0,0,0,0,0.156980256395025,0,6.54227415789824,9.60706418156924,6.20939871810618,4.74384331810463,0,0,0,0.141353071433941,0.216388639742091,0.995261931078505,4.68825091867698,4.27721101453538,0.296521128680622,0.123563938946503,0,1.95463285643963,0.802577647298789,0,0.182454789215666,0.19566461893209,0,2.36750641709634,0,0,0,0.751617097072463,0.207376382794494,0,0,0,0,0.569219092059585,0,0.173559738335131,0.0979923974143777,0,0.34945333648406,0,0.967563312890852,0.438535902517113,0.246346371159628,0.581934098930517,0,0,0,0,0,0.195551382734803,0.0801588202515337,0.213452994739353,0,0,0,0,0,0,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0,1.11712960508902,8.02061484040893,1.43574604915363,5.19165401297377,15.8813637810531,7.81100101046554,13.3023275523718,0,0,0,0,0,0.393709926058995,0.0846733320657845,0,0.272406812223151,0.160753148465019,0.137539436597234,0,0,0.77380195455795,0,0.335434687599266,20.1742610685947,7.97309739651971,0,0.35857467866569,0,0.714695326373367,9.26928758511604,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0.513260513652988,0,3.20362237703084,1.88645166119599,1.65695622138878,0,0,0,0,0,0,0,0,2.19875734750328,0,0,0,10.3213655224213,2.66229723688445,0.745156835296601,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,2.56241518587947,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.2108442174239,0,0,0,0,0,0,0,0,0,0,1.07962490351128,0.825788063434183,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0.546974809018219,4.38606213485746,0,0,0.766574565837572,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0.230467975111559,0,0.135939465953663,0.0657727735628491,0,0,0.235479278551542,0,9.24898138935504,0,0,0,0.214429632529969,0,0,0,0,0,0,0,12.4765934057881,0.118332000730565,0,2.54032230114557,0,0,0,0.111855431797792,0,0.975343399858155,0.647428837187895,0,0,1.94284397223656,0.467878926924211,0,0,1.58124514854544,0,1.96251696636676,12.4250394553791,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,2.92134555298607,5.04602211744995,0,0,0.271965960763659,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0.250707539292375,0.151557396436479,0,0,0.103432995861895,1.0661699095049,0.952257725854961,0.193766729508018,0.124149428591716,0,0.954707374172474,1.41482032270754,0.217716747896961,0.342233301085281,0.471464371102113,1.93649954560226,1.33064142618405,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@TMEM116 | |||
}} | }} |
Latest revision as of 10:33, 16 September 2015
Short description: | p3@TMEM116 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TMEM116_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000546962, ENST00000550233, ENST00000550800_5end |
EntrezGene: | TMEM116 |
HGNC: | 25084 |
UniProt: | F8W1L7F8VQZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
valve | 1.66e-12 | 3 |
cardiac mesenchyme | 1.66e-12 | 3 |
cardial valve | 1.66e-12 | 3 |
tunica intima | 1.66e-12 | 3 |
heart layer | 1.66e-12 | 3 |
endocardium | 1.66e-12 | 3 |
endocardial cushion | 1.66e-12 | 3 |
presumptive endocardium | 1.66e-12 | 3 |
adult organism | 3.58e-12 | 114 |
major salivary gland | 2.15e-09 | 2 |
primary circulatory organ | 1.06e-08 | 27 |
open tracheal system trachea | 1.19e-08 | 2 |
atrioventricular valve | 1.56e-08 | 2 |
compound organ | 1.73e-07 | 68 |
saliva-secreting gland | 5.97e-07 | 6 |
gland of oral region | 5.97e-07 | 6 |
gland of foregut | 5.97e-07 | 6 |
oral gland | 5.97e-07 | 6 |
oral cavity | 5.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.24e-10 | 2 |
chronic leukemia | 9.71e-09 | 8 |