FFCP PHASE1:Hg19::chr7:134212226..134212234,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=57016 | |EntrezGene=57016 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=382 | |HGNC=382 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=O60218 | |UniProt=O60218 | ||
|association_with_transcript=-109bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end | |association_with_transcript=-109bp_to_ENST00000359579,NM_020299,uc003vrr.2_5end | ||
|cluster_id=chr7:134212226..134212234,+ | |||
|coexpression_cluster_id=C125 | |coexpression_cluster_id=C125 | ||
|description=CAGE_peak_5_at_AKR1B10_5end | |description=CAGE_peak_5_at_AKR1B10_5end |
Latest revision as of 11:14, 16 September 2015
Short description: | p5@AKR1B10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_AKR1B10_5end |
Coexpression cluster: | C125_mucinous_alveolar_mesothelioma_Smooth_lung_CD14_Nucleus |
Association with transcript: | -109bp_to_ENST00000359579, NM_020299, uc003vrr.2_5end |
EntrezGene: | AKR1B10 |
HGNC: | 382 |
UniProt: | O60218 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@AKR1B10 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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mucus secreting cell | 1.84e-34 | 1 |
seromucus secreting cell | 5.48e-18 | 2 |
epithelial cell of lung | 5.73e-08 | 19 |
epithelial cell of uterus | 9.49e-07 | 6 |
stromal cell of endometrium | 9.49e-07 | 6 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.73e-08 | 19 |
lung epithelium | 5.73e-08 | 19 |
lung | 5.24e-07 | 22 |
respiratory tube | 5.24e-07 | 22 |
respiration organ | 5.24e-07 | 22 |
pair of lungs | 5.24e-07 | 22 |
lung primordium | 5.24e-07 | 22 |
lung bud | 5.24e-07 | 22 |
endo-epithelium | 5.45e-07 | 82 |
hepatic diverticulum | 5.57e-07 | 22 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.84e-34 | 1 |
lung large cell carcinoma | 2.59e-12 | 3 |
carcinoma | 1.24e-11 | 106 |
lung cancer | 7.75e-10 | 15 |
respiratory system cancer | 2.77e-09 | 16 |
cell type cancer | 1.02e-08 | 143 |
non-small cell lung carcinoma | 6.55e-08 | 5 |
female reproductive endometrioid cancer | 9.49e-07 | 6 |
Showing 1 to 8 of 8 entries