FFCP PHASE1:Hg19::chr7:134430240..134430266,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1441 | |||
|TSSclassifier=strong | |||
|UniProt=C9J813 | |||
|association_with_transcript=22bp_to_ENST00000436461_5end | |||
|cluster_id=chr7:134430240..134430266,+ | |||
|coexpression_cluster_id=C2878 | |||
|description=CAGE_peak_35_at_CALD1_5end | |||
|id=chr7:134430240..134430266,+ | |||
|ontology_enrichment_celltype=CL:0002334!2.88e-11!12;CL:0002579!5.60e-07!3;CL:0002615!6.04e-07!3;CL:0002580!6.63e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.30e-16;12!CL:0002579;1.04e-13;3!CL:0002615;1.10e-13;3!CL:0002580;1.33e-13;3!CL:0000136;3.08e-11;13!CL:0002617;2.63e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.22e-16,12;CL:0002579,9.78e-14,3;CL:0002615,1.16e-13,3;CL:0002580,1.42e-13,3;CL:0000136,1.27e-09,15;CL:0002617,2.86e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0004872;1.12e-09;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!9.84e-30!115;UBERON:0003688!2.82e-12!6;UBERON:0002358!2.82e-12!6;UBERON:0003684!2.82e-12!6;UBERON:0001178!2.82e-12!6;UBERON:0004457!7.07e-10!12;UBERON:0000042!7.07e-10!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;1.25e-25;6!UBERON:0002358;1.25e-25;6!UBERON:0003684;1.25e-25;6!UBERON:0001178;1.25e-25;6!UBERON:0004457;7.42e-17;9!UBERON:0000042;7.42e-17;9!UBERON:0000310;1.76e-14;10!UBERON:0001443;4.21e-13;11!UBERON:0004458;2.43e-11;48!UBERON:0002323;1.21e-10;45!UBERON:0005406;2.52e-09;2!UBERON:0002360;5.35e-09;2!UBERON:0000094;5.35e-09;2!UBERON:0010743;5.35e-09;2!UBERON:0001905;1.47e-08;2!UBERON:0002757;1.47e-08;2!UBERON:0010134;1.47e-08;2!UBERON:0005408;1.47e-08;2!UBERON:0001899;1.47e-08;2!UBERON:0002553;1.83e-08;52!UBERON:0002106;8.83e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,1.23e-25,6;UBERON:0002358,1.23e-25,6;UBERON:0003684,1.23e-25,6;UBERON:0001178,1.23e-25,6;UBERON:0004457,5.48e-22,12;UBERON:0000042,5.48e-22,12;UBERON:0002323,1.75e-14,46;UBERON:0000310,1.99e-14,10;UBERON:0007023,7.15e-14,114;UBERON:0003886,9.31e-14,54;UBERON:0004458,2.13e-13,49;UBERON:0001443,4.70e-13,11;UBERON:0002553,8.87e-12,61;UBERON:0005406,2.23e-09,2;UBERON:0002360,3.37e-09,2;UBERON:0000094,3.37e-09,2;UBERON:0010743,3.37e-09,2;UBERON:0001905,1.66e-08,2;UBERON:0002757,1.66e-08,2;UBERON:0010134,1.66e-08,2;UBERON:0005408,1.66e-08,2;UBERON:0001899,1.66e-08,2;UBERON:0004923,6.20e-08,66;UBERON:0009569,9.94e-08,112;UBERON:0002106,8.84e-07,3;UBERON:0004854,8.84e-07,3;UBERON:0009034,8.84e-07,3;UBERON:0002095,8.84e-07,3;UBERON:0004782,8.84e-07,3;UBERON:0003281,8.84e-07,3;UBERON:0009664,8.84e-07,3;UBERON:0002296,8.84e-07,3;UBERON:0005602,8.84e-07,3;UBERON:0001179,8.84e-07,3;UBERON:0006293,8.84e-07,3 | |||
|phase1_expression=3.08853244759946,3.21150785836475,8.45726424575827,7.00513088471913,6.25745532198203,5.23403114460221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0.397227542439656,0.573673241497627,0,0,0,0,0.933633106199299,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0.206105058476878,1.54584324027377,0.930584281657949,0,0,0.252433774244115,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72313363218819,0,0,0,0,0,0,0,0,0.355391948742546,0,0,1.74306691720059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.315404830067869,1.52283839490527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.21026396419431,16.4204311418227,4.77122160536225,8.71346214938766,11.2575594794675,5.30817939773905,2.96836132889982,0,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.976135183992909,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899362287916574,0,0,0,0,0,0,0,0,0.409499734223957,0.141405431953713,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,1.39473591775749,0.552567831062295,0,0,0,0,0,0,0,2.46608514092334,0,0,0,0,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.442317039724898,0,1.75508317723178,0,0,0.384751292518985,0,0,0,0,2.55200927785536,4.8546724502987,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.22206028986725,0,0,0,0.202203398942031,0,0,0,0,0,2.36750641709634,0,0,4.86536663139357,0,0,0,0,0,0,0,0,0,0,0,2.79562669187248,0,0,0,0,0.484945082442097,0,0.90392296312213,0,0,0.0633107959558787,0,0,1.70762395791482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.279282401272254,1.83328339209347,0,0,0.429226048136571,0,0.604651252380536,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0,0,0.945668487590378,0.891727998294968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49502377594773,0.157204305099666,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0.573409195690071,2.44043913381075,0.124192805882767,0,0,0,0,0,0,0,0.447764408660622,0,0,0,0,0,0,0.302461847526478,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,1.19428766609585,0,0,0,3.78554694685953,0,1.50109113962448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0.3062454773532,0.192687675289379,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,13.6882797595648,0,1.56302802246618,0,0,0,0,0,0,0,0,0,0,0,0,1.07140367175657,1.68141861109412,0.606965604236632,0,2.92717821536708,0,0,0.271878931907327,0,0,0,1.02041020705668,0,0,0,0,0,0.857718530119876,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.615976841137482,0,0.971421986118279,0,0,0,0,0,0,0.231522474323834,0.218559560503957,0,0.735444965261716,0,3.14093547383912,1.48523200163543,0.4226557275834,0.169927114687817,16.1652338925348,7.92832022074999,0,0,0,0,0,0.917458566809082,0.430018749454354,0,0.135982980381829,0.436350690340377,0,0,0.462175628631418,1.73050624849516,0,0,0,0,0,0,0,1.43979526614655,0,0,0,0.213233981900981,0.23806443146374,0,0.186224142887574,0,0.572824424503484,0,0.217716747896961,0,0,0.645499848534087,0.665320713092027,0,0,0,0,0,1.22241444182866,0.813792356631477,1.33151354837103,0.402547587182052,0 | |||
|short_description=p35@CALD1 | |||
}} |
Latest revision as of 11:39, 16 September 2015
Short description: | p35@CALD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_35_at_CALD1_5end |
Coexpression cluster: | C2878_Preadipocyte_spleen_Adipocyte_ovary_chorionic_Mesenchymal_dura |
Association with transcript: | 22bp_to_ENST00000436461_5end |
EntrezGene: | CALD1 |
HGNC: | 1441 |
UniProt: | C9J813 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.22e-16 | 12 |
omentum preadipocyte | 9.78e-14 | 3 |
adipocyte of omentum tissue | 1.16e-13 | 3 |
preadipocyte of the breast | 1.42e-13 | 3 |
fat cell | 1.27e-09 | 15 |
adipocyte of breast | 2.86e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
omentum | 1.23e-25 | 6 |
peritoneum | 1.23e-25 | 6 |
abdominal cavity | 1.23e-25 | 6 |
visceral peritoneum | 1.23e-25 | 6 |
cavity lining | 5.48e-22 | 12 |
serous membrane | 5.48e-22 | 12 |
body cavity | 1.75e-14 | 46 |
breast | 1.99e-14 | 10 |
adult organism | 7.15e-14 | 114 |
body cavity precursor | 9.31e-14 | 54 |
body cavity or lining | 2.13e-13 | 49 |
chest | 4.70e-13 | 11 |
anatomical cavity | 8.87e-12 | 61 |
perirenal fat | 2.23e-09 | 2 |
meninx | 3.37e-09 | 2 |
membrane organ | 3.37e-09 | 2 |
meningeal cluster | 3.37e-09 | 2 |
pineal body | 1.66e-08 | 2 |
regional part of epithalamus | 1.66e-08 | 2 |
secretory circumventricular organ | 1.66e-08 | 2 |
circumventricular organ | 1.66e-08 | 2 |
epithalamus | 1.66e-08 | 2 |
organ component layer | 6.20e-08 | 66 |
subdivision of trunk | 9.94e-08 | 112 |
spleen | 8.84e-07 | 3 |
gastrointestinal system mesentery | 8.84e-07 | 3 |
stomach region | 8.84e-07 | 3 |
mesentery | 8.84e-07 | 3 |
gastrointestinal system serosa | 8.84e-07 | 3 |
mesentery of stomach | 8.84e-07 | 3 |
gut mesentery | 8.84e-07 | 3 |
dorsal mesentery | 8.84e-07 | 3 |
dorsal mesogastrium | 8.84e-07 | 3 |
peritoneal cavity | 8.84e-07 | 3 |
spleen primordium | 8.84e-07 | 3 |