FFCP PHASE1:Hg19::chr4:160150491..160150555,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9693 | |EntrezGene=9693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16854 | |HGNC=16854 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_ENST00000503328_5end | |association_with_transcript=2bp_to_ENST00000503328_5end | ||
|cluster_id=chr4:160150491..160150555,+ | |||
|description=CAGE_peak_2_at_RAPGEF2_5end | |description=CAGE_peak_2_at_RAPGEF2_5end | ||
|id=chr4:160150491..160150555,+ | |id=chr4:160150491..160150555,+ | ||
|ontology_enrichment_celltype=CL:0000077!1.86e-09!19 | |ontology_enrichment_celltype=CL:0000077!1.86e-09!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.97e-14;19 | |ontology_enrichment_celltype_v019=CL:0000077;1.97e-14;19 | ||
|ontology_enrichment_celltype_v019_2=CL:0000077,2.42e-14,19 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.04e-10;29!UBERON:0005062;2.29e-08;4!UBERON:0007284;2.29e-08;4 | |ontology_enrichment_development_v019=UBERON:0008947;1.04e-10;29!UBERON:0005062;2.29e-08;4!UBERON:0007284;2.29e-08;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,2.01e-10,106;DOID:162,3.77e-10,235;DOID:0050687,7.41e-10,143;DOID:14566,1.12e-09,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.95e-10!9 | |ontology_enrichment_uberon=UBERON:0001737!2.95e-10!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;5.07e-21;9!UBERON:0001557;5.07e-21;9!UBERON:0000072;2.93e-07;37 | |ontology_enrichment_uberon_v019=UBERON:0001737;5.07e-21;9!UBERON:0001557;5.07e-21;9!UBERON:0000072;2.93e-07;37 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.19e-21,9;UBERON:0001557,1.59e-10,19;UBERON:0004921,9.26e-09,118;UBERON:0001007,1.15e-07,145;UBERON:0001555,1.15e-07,145;UBERON:0007026,1.15e-07,145;UBERON:0008947,2.27e-07,38;UBERON:0003258,2.27e-07,38;UBERON:0004119,7.98e-07,160;UBERON:0000925,7.98e-07,160;UBERON:0006595,7.98e-07,160 | |||
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| ||
|short_description=p2@RAPGEF2 | |short_description=p2@RAPGEF2 | ||
}} | }} |
Latest revision as of 12:17, 16 September 2015
Short description: | p2@RAPGEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAPGEF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 2bp_to_ENST00000503328_5end |
EntrezGene: | RAPGEF2 |
HGNC: | 16854 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 2.42e-14 | 19 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.19e-21 | 9 |
upper respiratory tract | 1.59e-10 | 19 |
subdivision of digestive tract | 9.26e-09 | 118 |
digestive system | 1.15e-07 | 145 |
digestive tract | 1.15e-07 | 145 |
primitive gut | 1.15e-07 | 145 |
respiratory primordium | 2.27e-07 | 38 |
endoderm of foregut | 2.27e-07 | 38 |
endoderm-derived structure | 7.98e-07 | 160 |
endoderm | 7.98e-07 | 160 |
presumptive endoderm | 7.98e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 2.01e-10 | 106 |
cancer | 3.77e-10 | 235 |
cell type cancer | 7.41e-10 | 143 |
disease of cellular proliferation | 1.12e-09 | 239 |