FFCP PHASE1:Hg19::chr20:44350968..44350994,+: Difference between revisions
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|id=chr20:44350968..44350994,+
|short_description=p1@SPINT4
|description=CAGE_peak_1_at_SPINT4_5end
|association_with_transcript=0bp_to_ENST00000279058,NM_178455,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=391253 | |EntrezGene=391253 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16130 | |HGNC=16130 | ||
|TSSclassifier=strong | |||
|UniProt=Q6UDR6 | |UniProt=Q6UDR6 | ||
|association_with_transcript=0bp_to_ENST00000279058,NM_178455,uc002xpe.1_5end | |||
|cluster_id=chr20:44350968..44350994,+ | |||
|coexpression_cluster_id=C39 | |||
|description=CAGE_peak_1_at_SPINT4_5end | |||
|id=chr20:44350968..44350994,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.11e-21;2!UBERON:0009117;8.13e-17;10!UBERON:0005564;8.13e-17;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003135!1.36e-36!11;UBERON:0006947!2.81e-34!3;UBERON:0004054!2.81e-34!3;UBERON:0001301!2.16e-26!1;UBERON:0001000!2.78e-26!1;UBERON:0005352!2.78e-26!1;UBERON:0005904!5.23e-26!4;UBERON:0005418!7.62e-26!1;UBERON:0001389!7.62e-26!1;UBERON:0000026!7.62e-26!1;UBERON:0008784!7.62e-26!1;UBERON:0006058!7.62e-26!1;UBERON:0003663!7.62e-26!1;UBERON:0001383!7.62e-26!1;UBERON:0004256!7.62e-26!1;UBERON:0002529!7.62e-26!1;UBERON:0004708!7.62e-26!1;UBERON:0002101!7.62e-26!1;UBERON:0004709!7.62e-26!1;UBERON:0003661!7.62e-26!1;UBERON:0002471!7.62e-26!1;UBERON:0004357!7.62e-26!1;UBERON:0009872!7.62e-26!1;UBERON:0004347!7.62e-26!1;UBERON:0005420!7.62e-26!1;UBERON:0005732!7.62e-26!1;UBERON:0006057!7.62e-26!1;UBERON:0000978!7.62e-26!1;UBERON:0002103!7.62e-26!1;UBERON:0001665!7.62e-26!1;UBERON:0003823!7.62e-26!1;UBERON:0000154!7.62e-26!1;UBERON:0005733!7.62e-26!1;UBERON:0005730!7.62e-26!1;UBERON:0003101!1.33e-18!22;UBERON:0000079!1.33e-18!22;UBERON:0001630!1.21e-13!2;UBERON:0005090!1.21e-13!2;UBERON:0000473!1.94e-13!8;UBERON:0003133!9.00e-09!48;UBERON:0005156!3.33e-07!59;UBERON:0000990!3.33e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;8.62e-58;11!UBERON:0006947;1.28e-53;3!UBERON:0004054;1.28e-53;3!UBERON:0001301;6.62e-41;1!UBERON:0001000;9.91e-41;1!UBERON:0005352;9.91e-41;1!UBERON:0005904;1.48e-40;4!UBERON:0003101;2.19e-29;22!UBERON:0000079;2.19e-29;22!UBERON:0000473;9.92e-21;8!UBERON:0000058;5.90e-17;10!UBERON:0003133;1.62e-10;44!UBERON:0004175;1.27e-08;21!UBERON:0000991;1.48e-08;21!UBERON:0005156;2.68e-07;59!UBERON:0000990;2.68e-07;59 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,8.62e-58,11;UBERON:0006947,1.28e-53,3;UBERON:0004054,1.28e-53,3;UBERON:0001301,6.62e-41,1;UBERON:0001000,9.91e-41,1;UBERON:0005352,9.91e-41,1;UBERON:0005904,1.48e-40,4;UBERON:0003101,2.19e-29,22;UBERON:0000079,2.19e-29,22;UBERON:0000473,9.92e-21,8;UBERON:0003133,6.59e-14,48;UBERON:0005156,1.91e-11,59;UBERON:0000990,1.91e-11,59;UBERON:0000058,1.99e-09,19;UBERON:0000991,1.48e-08,21;UBERON:0009196,1.48e-08,21;UBERON:0009117,1.48e-08,21;UBERON:0005564,1.48e-08,21;UBERON:0004176,3.27e-08,22;UBERON:0003886,2.08e-07,54;UBERON:0004175,2.14e-07,25 | |||
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|short_description=p1@SPINT4 | |||
}} | }} |
Latest revision as of 12:18, 16 September 2015
Short description: | p1@SPINT4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPINT4_5end |
Coexpression cluster: | C39_epididymis_ductus_seminal_testis_acute_thyroid_CD133 |
Association with transcript: | 0bp_to_ENST00000279058, NM_178455, uc002xpe.1_5end |
EntrezGene: | SPINT4 |
HGNC: | 16130 |
UniProt: | Q6UDR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 8.62e-58 | 11 |
male genital duct | 1.28e-53 | 3 |
internal male genitalia | 1.28e-53 | 3 |
epididymis | 6.62e-41 | 1 |
vas deferens | 9.91e-41 | 1 |
spermatic cord | 9.91e-41 | 1 |
duct of male reproductive system | 1.48e-40 | 4 |
male organism | 2.19e-29 | 22 |
male reproductive system | 2.19e-29 | 22 |
testis | 9.92e-21 | 8 |
reproductive organ | 6.59e-14 | 48 |
reproductive structure | 1.91e-11 | 59 |
reproductive system | 1.91e-11 | 59 |
duct | 1.99e-09 | 19 |
gonad | 1.48e-08 | 21 |
indifferent external genitalia | 1.48e-08 | 21 |
indifferent gonad | 1.48e-08 | 21 |
gonad primordium | 1.48e-08 | 21 |
external genitalia | 3.27e-08 | 22 |
body cavity precursor | 2.08e-07 | 54 |
internal genitalia | 2.14e-07 | 25 |