FFCP PHASE1:Hg19::chr16:31439646..31439688,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1339 | |EntrezGene=1339 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2279 | |HGNC=2279 | ||
|TSSclassifier=strong | |||
|UniProt=Q02221 | |UniProt=Q02221 | ||
|association_with_transcript=32bp_to_uc002ebx.1_5end | |association_with_transcript=32bp_to_uc002ebx.1_5end | ||
|cluster_id=chr16:31439646..31439688,- | |||
|coexpression_cluster_id=C20 | |coexpression_cluster_id=C20 | ||
|description=CAGE_peak_1_at_COX6A2_5end | |description=CAGE_peak_1_at_COX6A2_5end | ||
|id=chr16:31439646..31439688,- | |id=chr16:31439646..31439688,- | ||
|ontology_enrichment_celltype=CL:0000188!9.66e-09!9 | |ontology_enrichment_celltype=CL:0000188!9.66e-09!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;6.33e-14;9!CL:0000680;5.87e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,6.69e-14,9 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.41e-07;65 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-63!115;UBERON:0001049!2.44e-26!57;UBERON:0005068!2.44e-26!57;UBERON:0006241!2.44e-26!57;UBERON:0007135!2.44e-26!57;UBERON:0003075!2.01e-22!86;UBERON:0007284!2.01e-22!86;UBERON:0005743!2.86e-22!86;UBERON:0002616!7.89e-22!59;UBERON:0001017!1.12e-21!82;UBERON:0002346!1.06e-20!90;UBERON:0000073!9.56e-20!94;UBERON:0001016!9.56e-20!94;UBERON:0003080!6.70e-19!42;UBERON:0000955!1.44e-18!69;UBERON:0006238!1.44e-18!69;UBERON:0002780!3.62e-18!41;UBERON:0001890!3.62e-18!41;UBERON:0006240!3.62e-18!41;UBERON:0004121!1.26e-14!169;UBERON:0000924!7.65e-14!173;UBERON:0006601!7.65e-14!173;UBERON:0000153!2.32e-13!129;UBERON:0007811!2.32e-13!129;UBERON:0000922!7.86e-13!612;UBERON:0002020!1.16e-12!34;UBERON:0003528!1.16e-12!34;UBERON:0001893!1.56e-12!34;UBERON:0000481!1.79e-12!347;UBERON:0000468!2.00e-12!659;UBERON:0003056!4.80e-12!61;UBERON:0002791!6.44e-12!33;UBERON:0000033!1.17e-11!123;UBERON:0000483!1.29e-11!309;UBERON:0001869!2.37e-11!32;UBERON:0000119!2.93e-11!312;UBERON:0001950!3.21e-10!20;UBERON:0002619!4.26e-10!22;UBERON:0002050!9.21e-10!605;UBERON:0005423!9.21e-10!605;UBERON:0000923!2.30e-09!604;UBERON:0005291!2.30e-09!604;UBERON:0006598!2.30e-09!604;UBERON:0002532!2.30e-09!604;UBERON:0000475!4.57e-09!365;UBERON:0000467!7.99e-09!625;UBERON:0000480!9.56e-09!626;UBERON:0003076!1.26e-08!15;UBERON:0003057!1.26e-08!15;UBERON:0000956!2.14e-08!25;UBERON:0000203!2.14e-08!25;UBERON:0001894!4.95e-08!7;UBERON:0006222!4.95e-08!7;UBERON:0000062!9.62e-08!511;UBERON:0000025!1.05e-07!194;UBERON:0002298!1.42e-07!8;UBERON:0004111!5.48e-07!241;UBERON:0004732!5.54e-07!13 | |ontology_enrichment_uberon=UBERON:0007023!1.46e-63!115;UBERON:0001049!2.44e-26!57;UBERON:0005068!2.44e-26!57;UBERON:0006241!2.44e-26!57;UBERON:0007135!2.44e-26!57;UBERON:0003075!2.01e-22!86;UBERON:0007284!2.01e-22!86;UBERON:0005743!2.86e-22!86;UBERON:0002616!7.89e-22!59;UBERON:0001017!1.12e-21!82;UBERON:0002346!1.06e-20!90;UBERON:0000073!9.56e-20!94;UBERON:0001016!9.56e-20!94;UBERON:0003080!6.70e-19!42;UBERON:0000955!1.44e-18!69;UBERON:0006238!1.44e-18!69;UBERON:0002780!3.62e-18!41;UBERON:0001890!3.62e-18!41;UBERON:0006240!3.62e-18!41;UBERON:0004121!1.26e-14!169;UBERON:0000924!7.65e-14!173;UBERON:0006601!7.65e-14!173;UBERON:0000153!2.32e-13!129;UBERON:0007811!2.32e-13!129;UBERON:0000922!7.86e-13!612;UBERON:0002020!1.16e-12!34;UBERON:0003528!1.16e-12!34;UBERON:0001893!1.56e-12!34;UBERON:0000481!1.79e-12!347;UBERON:0000468!2.00e-12!659;UBERON:0003056!4.80e-12!61;UBERON:0002791!6.44e-12!33;UBERON:0000033!1.17e-11!123;UBERON:0000483!1.29e-11!309;UBERON:0001869!2.37e-11!32;UBERON:0000119!2.93e-11!312;UBERON:0001950!3.21e-10!20;UBERON:0002619!4.26e-10!22;UBERON:0002050!9.21e-10!605;UBERON:0005423!9.21e-10!605;UBERON:0000923!2.30e-09!604;UBERON:0005291!2.30e-09!604;UBERON:0006598!2.30e-09!604;UBERON:0002532!2.30e-09!604;UBERON:0000475!4.57e-09!365;UBERON:0000467!7.99e-09!625;UBERON:0000480!9.56e-09!626;UBERON:0003076!1.26e-08!15;UBERON:0003057!1.26e-08!15;UBERON:0000956!2.14e-08!25;UBERON:0000203!2.14e-08!25;UBERON:0001894!4.95e-08!7;UBERON:0006222!4.95e-08!7;UBERON:0000062!9.62e-08!511;UBERON:0000025!1.05e-07!194;UBERON:0002298!1.42e-07!8;UBERON:0004111!5.48e-07!241;UBERON:0004732!5.54e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;7.23e-24;16!UBERON:0002036;7.23e-24;16!UBERON:0002385;4.58e-12;31!UBERON:0001015;4.58e-12;31!UBERON:0000383;4.58e-12;31!UBERON:0000922;5.26e-09;49!UBERON:0003296;1.07e-08;4!UBERON:0010133;1.07e-08;4!UBERON:0007023;1.82e-08;114!UBERON:0004151;3.04e-08;3!UBERON:0003978;4.92e-08;3!UBERON:0000946;4.92e-08;3!UBERON:0001894;3.82e-07;7!UBERON:0002368;6.83e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,9.80e-28,114;UBERON:0003296,1.15e-08,4;UBERON:0010133,1.15e-08,4;UBERON:0004151,3.04e-08,3;UBERON:0003978,4.93e-08,3;UBERON:0009751,4.93e-08,3;UBERON:0000946,4.93e-08,3;UBERON:0002523,4.93e-08,3;UBERON:0005983,4.93e-08,3;UBERON:0002165,4.93e-08,3;UBERON:0002062,4.93e-08,3;UBERON:0007280,4.93e-08,3;UBERON:0000483,1.19e-07,306;UBERON:0000119,1.87e-07,309;UBERON:0002368,2.46e-07,35;UBERON:0003103,3.06e-07,68;UBERON:0000922,3.61e-07,592;UBERON:0001894,3.69e-07,7;UBERON:0006222,3.69e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9511860737343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,1.32529768321485,0.69716365721711,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9231360987951,24.0834566161479,6.87979051674338,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22559618670591,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,186.326879129295,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,22.1538175042603,0.0915694648183434,0.082509499920588,0,0,0,12.8572055328522,3.23502095940753,13.6618270506255,16.6782252706282,1.07420244868274,4.93056759308377,14.6589799155694,389.693220025769,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,21.6530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6594374230244,0.242721043499027,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0,0,12.5526232598174,0,6.2983186963569,0,0,0,0,0,0,2.66337195219721,0,0,0.969332746095218,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,2.95547618953547,0.87754158861589,0,0,0.230850775511391,0,0,0,0.434589487688032,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.539209063845416,5154.15365095282,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,1.13176968554523,138.208794579446,0,0,0,0,75.7484218774556,0,248.578814858586,0,0,0.633107959558787,3.12882212375685,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,1470.70112509969,2795.52801251853,628.856769529289,3624.37353805719,10006.5468602079,2887.61548784039,1922.52224868016,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.275078873194468,0.83088067605837,0,0,0.668245123238271,0,2.44297692627514,1.20645552710496,0,0,0,5576.76763169138,9496.38513095139,0,0,0,0,0,0,0,0.226624183040251,9.37934295539728,37.101928895422,0.387848869084652,2.6446520348538,0,0,0.320362237703084,2.82967749179399,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.732157589411779,0.3755727921195,0.573409195690071,0.665574309221114,1.1177352529449,0,0,5.15606999641603,0.285465333544967,0,0,0,0,0,0,0.378806010550178,2.26411111577318,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,0.205116364240755,0.504143392443436,0.414943514785307,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.19024743058172,1.09394961803644,47.1501679497177,1555.62204425044,0,0,16.6067569122269,4.37168838884471,6.06965604236632,5.23623040107984,0,0,0,0.611727596791485,1.77586488619693,0,0,3.13972371402056,0.628462359664008,0,2.73947616152849,0,0.47775168788705,13.4375903052114,0,0,0.173858272302579,0,0,0,0,41.7320538055669,0,0,0,0,0,0,0,0,0,5960.87730398895,2625.08797131424,3776.35578843718,498.339478878677,17.3115202961958,0,0,0,0,0,0.385870790539723,9.39806110167016,0,1.22574160876953,0,1.76677620403451,0.594092800654172,43.5335399410902,0,0.187967835959707,0.128915775947154,0,0,0,0,0.730336388246517,151.380663523498,0.286679166302903,0,1.15585533324555,0.436350690340377,1.0580536810308,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,1.0028301571695,6.28963195211387,1.60778478093707,1.65833887891756,0.517164979309476,1606.50481964199,968.922236057423,0.193766729508018,1.30356900021302,0,68.4843423073054,377.352791784995,3296.23156315999,8161.57976428178,152.552400078041,29.908159648746,659.332826674198,0,1.06727345877715,0,0,1649.52582509628,0.855690109280065,1.62758471326295,0,141.495476894491,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.9511860737343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76821751921912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250237039743928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43947412259191,1.32529768321485,0.69716365721711,0.414644220061482,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,52.9231360987951,24.0834566161479,6.87979051674338,5.90789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.22559618670591,1.84928690295345,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00034104211935,0,0,0,0,0,0,0,0,0,0,0,0,186.326879129295,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,22.1538175042603,0.0915694648183434,0.082509499920588,0,0,0,12.8572055328522,3.23502095940753,13.6618270506255,16.6782252706282,1.07420244868274,4.93056759308377,14.6589799155694,389.693220025769,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0.48763373908959,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,21.6530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,43.6594374230244,0.242721043499027,0,0,0.47748896947538,0,0.307160702099232,0,0.140669416410513,0,0,0,12.5526232598174,0,6.2983186963569,0,0,0,0,0,0,2.66337195219721,0,0,0.969332746095218,0.649376687132959,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,1.52581736317083,0.552896299656123,2.95547618953547,0.87754158861589,0,0,0.230850775511391,0,0,0,0.434589487688032,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.353830258013357,0.611030144933625,0,0,0,0.539209063845416,5154.15365095282,0.468528891450678,0,0,0,0.394584402849391,2.41981432097328,0,0.758238955541855,0,0,0,0,0,0,0,0,0,0,1.13176968554523,138.208794579446,0,0,0,0,75.7484218774556,0,248.578814858586,0,0,0.633107959558787,3.12882212375685,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.273810757783986,0,0,0,1470.70112509969,2795.52801251853,628.856769529289,3624.37353805719,10006.5468602079,2887.61548784039,1922.52224868016,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.275078873194468,0.83088067605837,0,0,0.668245123238271,0,2.44297692627514,1.20645552710496,0,0,0,5576.76763169138,9496.38513095139,0,0,0,0,0,0,0,0.226624183040251,9.37934295539728,37.101928895422,0.387848869084652,2.6446520348538,0,0,0.320362237703084,2.82967749179399,0,0,0,0,0,0,0.7520696820681,0,0,0,0,0.732157589411779,0.3755727921195,0.573409195690071,0.665574309221114,1.1177352529449,0,0,5.15606999641603,0.285465333544967,0,0,0,0,0,0,0.378806010550178,2.26411111577318,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.385239660814607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0.319267718114302,0.205116364240755,0.504143392443436,0.414943514785307,0.161475645631851,2.85538840518309,0,0,0,0,0,0,0,0.0752103283492573,0,3.12605604493237,0,0,0,0.472763092328763,0.781078098613847,0.826747186004736,0.19024743058172,1.09394961803644,47.1501679497177,1555.62204425044,0,0,16.6067569122269,4.37168838884471,6.06965604236632,5.23623040107984,0,0,0,0.611727596791485,1.77586488619693,0,0,3.13972371402056,0.628462359664008,0,2.73947616152849,0,0.47775168788705,13.4375903052114,0,0,0.173858272302579,0,0,0,0,41.7320538055669,0,0,0,0,0,0,0,0,0,5960.87730398895,2625.08797131424,3776.35578843718,498.339478878677,17.3115202961958,0,0,0,0,0,0.385870790539723,9.39806110167016,0,1.22574160876953,0,1.76677620403451,0.594092800654172,43.5335399410902,0,0.187967835959707,0.128915775947154,0,0,0,0,0.730336388246517,151.380663523498,0.286679166302903,0,1.15585533324555,0.436350690340377,1.0580536810308,0.743990036333503,0,0.432626562123789,0,0,0,0,0,0,1.0028301571695,6.28963195211387,1.60778478093707,1.65833887891756,0.517164979309476,1606.50481964199,968.922236057423,0.193766729508018,1.30356900021302,0,68.4843423073054,377.352791784995,3296.23156315999,8161.57976428178,152.552400078041,29.908159648746,659.332826674198,0,1.06727345877715,0,0,1649.52582509628,0.855690109280065,1.62758471326295,0,141.495476894491,0 | ||
|short_description=p1@COX6A2 | |short_description=p1@COX6A2 | ||
}} | }} |
Latest revision as of 12:31, 16 September 2015
Short description: | p1@COX6A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_COX6A2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 32bp_to_uc002ebx.1_5end |
EntrezGene: | COX6A2 |
HGNC: | 2279 |
UniProt: | Q02221 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 6.69e-14 | 9 |
Ontology term | p-value | n |
---|---|---|
adult organism | 9.80e-28 | 114 |
gland of diencephalon | 1.15e-08 | 4 |
neuroendocrine gland | 1.15e-08 | 4 |
cardiac chamber | 3.04e-08 | 3 |
valve | 4.93e-08 | 3 |
cardiac mesenchyme | 4.93e-08 | 3 |
cardial valve | 4.93e-08 | 3 |
tunica intima | 4.93e-08 | 3 |
heart layer | 4.93e-08 | 3 |
endocardium | 4.93e-08 | 3 |
endocardial cushion | 4.93e-08 | 3 |
presumptive endocardium | 4.93e-08 | 3 |
epithelium | 1.19e-07 | 306 |
cell layer | 1.87e-07 | 309 |
endocrine gland | 2.46e-07 | 35 |
compound organ | 3.06e-07 | 68 |
embryo | 3.61e-07 | 592 |
diencephalon | 3.69e-07 | 7 |
future diencephalon | 3.69e-07 | 7 |