Personal tools

FFCP PHASE1:Hg19::chr9:139693726..139693740,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP|DPIdataset=robustDPI|EntrezGene=84960|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28236|TSSclassifier=S|UniProt=|association_with_transcript=51bp_to_ENST00000415992_5end|description=CAGE_peak_9_at_KIAA1984_5end|id=chr9:139693726..139693740,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000182;3.86e-14;12!CL:0002535;1.80e-10;2|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-14,12;CL:0002535,1.72e-10,2|ontology_enrichment_development_v019=UBERON:0004161;1.33e-26;11!UBERON:0009497;1.38e-22;13!UBERON:0008425;3.56e-19;1!UBERON:0003104;1.29e-14;31!UBERON:0001041;5.27e-10;30|ontology_enrichment_disease=DOID:305!1.13e-07!106|ontology_enrichment_disease_v019=DOID:7;8.83e-11;39|ontology_enrichment_disease_v019_2=DOID:7,1.37e-11,39;DOID:305,5.33e-08,106|ontology_enrichment_uberon=UBERON:0005409!6.56e-12!35;UBERON:0004921!2.03e-11!129;UBERON:0004185!2.03e-11!129;UBERON:0000160!1.31e-10!27;UBERON:0001007!1.27e-09!155;UBERON:0001555!1.27e-09!155;UBERON:0007026!1.27e-09!155;UBERON:0000007!1.66e-09!2;UBERON:0004119!2.19e-08!169;UBERON:0000925!2.19e-08!169;UBERON:0006595!2.19e-08!169;UBERON:0007023!3.36e-08!115;UBERON:0003929!3.36e-07!54;UBERON:0001046!3.69e-07!19;UBERON:0000077!3.91e-07!130|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-15;19!UBERON:0006925;1.36e-15;19!UBERON:0002365;1.37e-13;31!UBERON:0002330;1.37e-13;31!UBERON:0002423;6.12e-12;25!UBERON:0006955;1.80e-10;2!UBERON:0004801;1.80e-10;2!UBERON:0002368;8.13e-09;33!UBERON:0000949;2.36e-08;43!UBERON:0000059;1.62e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-15,19;UBERON:0006925,1.55e-15,19;UBERON:0008836,1.55e-15,19;UBERON:0002365,1.22e-14,31;UBERON:0002330,1.22e-14,31;UBERON:0008835,1.81e-13,22;UBERON:0003894,1.81e-13,22;UBERON:0009854,6.71e-13,23;UBERON:0007499,6.76e-12,25;UBERON:0009497,6.76e-12,25;UBERON:0000015,6.76e-12,25;UBERON:0002423,6.76e-12,25;UBERON:0006235,6.76e-12,25;UBERON:0004161,6.76e-12,25;UBERON:0009856,1.88e-11,26;UBERON:0006955,1.72e-10,2;UBERON:0004801,1.72e-10,2;UBERON:0000949,4.18e-10,45;UBERON:0002368,1.38e-08,35;UBERON:0005172,2.02e-08,54;UBERON:0005173,2.02e-08,54;UBERON:0002530,1.01e-07,59;UBERON:0002417,1.40e-07,60;UBERON:0000916,1.40e-07,60;UBERON:0000059,1.67e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,1.66173999992772,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.886642856860642,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,1.483485450861,2.02210631562555,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0,2.73947616152849,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,2.18845852677505,0,0,0,0.301925687133347,0,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p9@KIAA1984}}
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=84960
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=28236
|TSSclassifier=strong
|UniProt=
|association_with_transcript=51bp_to_ENST00000415992_5end
|cluster_id=chr9:139693726..139693740,+
|description=CAGE_peak_9_at_KIAA1984_5end
|id=chr9:139693726..139693740,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019=CL:0000182;3.86e-14;12!CL:0002535;1.80e-10;2
|ontology_enrichment_celltype_v019_2=CL:0000182,4.52e-14,12;CL:0002535,1.72e-10,2
|ontology_enrichment_development_v019=UBERON:0004161;1.33e-26;11!UBERON:0009497;1.38e-22;13!UBERON:0008425;3.56e-19;1!UBERON:0003104;1.29e-14;31!UBERON:0001041;5.27e-10;30
|ontology_enrichment_disease=DOID:305!1.13e-07!106
|ontology_enrichment_disease_v019=DOID:7;8.83e-11;39
|ontology_enrichment_disease_v019_2=DOID:7,1.37e-11,39;DOID:305,5.33e-08,106
|ontology_enrichment_uberon=UBERON:0005409!6.56e-12!35;UBERON:0004921!2.03e-11!129;UBERON:0004185!2.03e-11!129;UBERON:0000160!1.31e-10!27;UBERON:0001007!1.27e-09!155;UBERON:0001555!1.27e-09!155;UBERON:0007026!1.27e-09!155;UBERON:0000007!1.66e-09!2;UBERON:0004119!2.19e-08!169;UBERON:0000925!2.19e-08!169;UBERON:0006595!2.19e-08!169;UBERON:0007023!3.36e-08!115;UBERON:0003929!3.36e-07!54;UBERON:0001046!3.69e-07!19;UBERON:0000077!3.91e-07!130
|ontology_enrichment_uberon_v019=UBERON:0002107;1.36e-15;19!UBERON:0006925;1.36e-15;19!UBERON:0002365;1.37e-13;31!UBERON:0002330;1.37e-13;31!UBERON:0002423;6.12e-12;25!UBERON:0006955;1.80e-10;2!UBERON:0004801;1.80e-10;2!UBERON:0002368;8.13e-09;33!UBERON:0000949;2.36e-08;43!UBERON:0000059;1.62e-07;11
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.55e-15,19;UBERON:0006925,1.55e-15,19;UBERON:0008836,1.55e-15,19;UBERON:0002365,1.22e-14,31;UBERON:0002330,1.22e-14,31;UBERON:0008835,1.81e-13,22;UBERON:0003894,1.81e-13,22;UBERON:0009854,6.71e-13,23;UBERON:0007499,6.76e-12,25;UBERON:0009497,6.76e-12,25;UBERON:0000015,6.76e-12,25;UBERON:0002423,6.76e-12,25;UBERON:0006235,6.76e-12,25;UBERON:0004161,6.76e-12,25;UBERON:0009856,1.88e-11,26;UBERON:0006955,1.72e-10,2;UBERON:0004801,1.72e-10,2;UBERON:0000949,4.18e-10,45;UBERON:0002368,1.38e-08,35;UBERON:0005172,2.02e-08,54;UBERON:0005173,2.02e-08,54;UBERON:0002530,1.01e-07,59;UBERON:0002417,1.40e-07,60;UBERON:0000916,1.40e-07,60;UBERON:0000059,1.67e-07,11
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26739473068848,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,1.66173999992772,0,0,0,0,0,0,0,0,0,0,0.331737779793674,0.886642856860642,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.0884575645033392,1.22206028986725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26053091691558,1.483485450861,2.02210631562555,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97520666736664,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0.207471757392654,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0,0.115233987555779,0,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.235479278551542,0,0,2.73947616152849,1.51149313853035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.853425474875886,0,0,0,0,0,2.18845852677505,0,0,0,0.301925687133347,0,0.218559560503957,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0.380095503034311,0,0,0,0,0.0757786982182394,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p9@KIAA1984
}}

Latest revision as of 13:22, 16 September 2015

Short description:p9@KIAA1984
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_9_at_KIAA1984_5end
Coexpression cluster:NA
Association with transcript: 51bp_to_ENST00000415992_5end
EntrezGene:KIAA1984
HGNC: 28236
UniProt: NA
Genome view:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0.0
1.0
2.0
3.0
4.0
5.0




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data