FFCP PHASE1:Hg19::chr9:139746641..139746649,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=158056 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24083 | |||
|TSSclassifier=strong | |||
|UniProt=Q6UXC1 | |||
|association_with_transcript=-169bp_to_ENST00000317446,ENST00000445819,NM_206920,uc004cjs.2,uc011mej.1_5end | |||
|cluster_id=chr9:139746641..139746649,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_MAMDC4_5end | |||
|id=chr9:139746641..139746649,+ | |||
|ontology_enrichment_celltype=CL:0000181!1.70e-07!12;CL:0000417!1.70e-07!12;CL:0000668!1.70e-07!12;CL:0000414!1.70e-07!12;CL:0000412!1.70e-07!12;CL:0000182!1.70e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;5.31e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,5.64e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000059!4.09e-08!11;UBERON:0000160!4.18e-08!27;UBERON:0002107!4.70e-08!19;UBERON:0006925!4.70e-08!19;UBERON:0008836!4.70e-08!19;UBERON:0005172!2.33e-07!55;UBERON:0005173!2.33e-07!55;UBERON:0008835!5.69e-07!22;UBERON:0003894!5.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.29e-16;17!UBERON:0002108;2.51e-15;4!UBERON:0005409;6.81e-13;22!UBERON:0002107;2.77e-09;19!UBERON:0006925;2.77e-09;19!UBERON:0004921;2.19e-08;33!UBERON:0000059;1.54e-07;11!UBERON:0002114;2.71e-07;2!UBERON:0002423;3.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.43e-16,17;UBERON:0002108,3.12e-15,4;UBERON:0005409,1.99e-11,25;UBERON:0002107,2.89e-09,19;UBERON:0006925,2.89e-09,19;UBERON:0008836,2.89e-09,19;UBERON:0008835,4.44e-08,22;UBERON:0003894,4.44e-08,22;UBERON:0009854,9.44e-08,23;UBERON:0000059,1.46e-07,11;UBERON:0002114,3.35e-07,2;UBERON:0007499,3.57e-07,25;UBERON:0009497,3.57e-07,25;UBERON:0000015,3.57e-07,25;UBERON:0002423,3.57e-07,25;UBERON:0006235,3.57e-07,25;UBERON:0004161,3.57e-07,25;UBERON:0004921,4.17e-07,118;UBERON:0009856,6.43e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0.982827216677626,4.13552934676983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.854738209659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60044461320525,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,3.05515072466813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,4.9827759450548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74847648403166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.803892390468535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p6@MAMDC4 | |||
}} |
Latest revision as of 13:54, 16 September 2015
Short description: | p6@MAMDC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_MAMDC4_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -169bp_to_ENST00000317446, ENST00000445819, NM_206920, uc004cjs.2, uc011mej.1_5end |
EntrezGene: | MAMDC4 |
HGNC: | 24083 |
UniProt: | Q6UXC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 5.64e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.43e-16 | 17 |
small intestine | 3.12e-15 | 4 |
gastrointestinal system | 1.99e-11 | 25 |
liver | 2.89e-09 | 19 |
digestive gland | 2.89e-09 | 19 |
liver bud | 2.89e-09 | 19 |
hepatic diverticulum | 4.44e-08 | 22 |
liver primordium | 4.44e-08 | 22 |
digestive tract diverticulum | 9.44e-08 | 23 |
large intestine | 1.46e-07 | 11 |
duodenum | 3.35e-07 | 2 |
epithelial sac | 3.57e-07 | 25 |
epithelium of foregut-midgut junction | 3.57e-07 | 25 |
anatomical boundary | 3.57e-07 | 25 |
hepatobiliary system | 3.57e-07 | 25 |
foregut-midgut junction | 3.57e-07 | 25 |
septum transversum | 3.57e-07 | 25 |
subdivision of digestive tract | 4.17e-07 | 118 |
sac | 6.43e-07 | 26 |