FFCP PHASE1:Hg19::chr3:168865250..168865272,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:168865250..168865272,- to FFCP PHASE1:Hg19::chr3:168865250..168865272,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2122 | |EntrezGene=2122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3498 | |HGNC=3498 | ||
|TSSclassifier=strong | |||
|UniProt=Q03112 | |UniProt=Q03112 | ||
|association_with_transcript=249bp_to_ENST00000464456,NM_001164000,uc003ffk.2_5end | |||
|cluster_id=chr3:168865250..168865272,- | |||
|coexpression_cluster_id=C117 | |||
|description=CAGE_peak_5_at_MECOM_5end | |||
|id=chr3:168865250..168865272,- | |||
|ontology_enrichment_celltype=CL:0002139!2.05e-10!24;CL:0000071!6.11e-09!18;CL:0002546!6.11e-09!18;CL:0000115!1.11e-08!35;CL:0000066!2.06e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002139;5.01e-15;24!CL:0000115;5.83e-13;36!CL:0000071;2.73e-12;18!CL:0002543;6.03e-11;6!CL:0002618;1.96e-08;3!CL:0002149;2.68e-07;6!CL:0002255;2.68e-07;6!CL:0000159;6.55e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.35e-15,24;CL:0000115,3.72e-14,36;CL:0000071,2.92e-12,18;CL:0002546,2.92e-12,18;CL:0002543,7.13e-11,6;CL:0002078,1.64e-10,45;CL:0000213,2.59e-08,58;CL:0000215,2.59e-08,58;CL:0002618,2.84e-08,3;CL:0002149,2.11e-07,6;CL:0002255,2.11e-07,6;CL:0000159,6.60e-07,2;CL:1000413,9.66e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002546;2.73e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3001;2.68e-07;6!DOID:299;4.00e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,2.11e-07,6;DOID:299,3.03e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0004111!5.52e-23!241;UBERON:0000477!3.24e-22!286;UBERON:0000025!1.36e-20!194;UBERON:0000483!9.06e-20!309;UBERON:0000119!4.21e-19!312;UBERON:0003914!5.57e-16!118;UBERON:0000481!1.57e-15!347;UBERON:0003103!5.17e-15!69;UBERON:0000468!2.01e-14!659;UBERON:0007023!9.30e-14!115;UBERON:0000467!1.02e-13!625;UBERON:0000480!1.42e-13!626;UBERON:0004872!6.77e-12!84;UBERON:0000922!2.60e-11!612;UBERON:0000475!7.28e-11!365;UBERON:0002050!1.37e-10!605;UBERON:0005423!1.37e-10!605;UBERON:0000923!3.44e-10!604;UBERON:0005291!3.44e-10!604;UBERON:0006598!3.44e-10!604;UBERON:0002532!3.44e-10!604;UBERON:0001009!3.57e-10!113;UBERON:0002049!6.28e-10!79;UBERON:0007798!6.28e-10!79;UBERON:0000490!7.83e-10!138;UBERON:0004535!2.75e-09!110;UBERON:0000055!5.00e-09!69;UBERON:0001986!6.11e-09!18;UBERON:0004638!6.11e-09!18;UBERON:0004852!6.11e-09!18;UBERON:0001008!7.88e-09!45;UBERON:0000062!1.17e-08!511;UBERON:0001981!1.37e-08!60;UBERON:0007500!1.37e-08!60;UBERON:0004537!1.37e-08!60;UBERON:0006965!1.37e-08!60;UBERON:0006554!2.64e-08!44;UBERON:0007100!3.77e-08!27;UBERON:0000064!2.03e-07!219;UBERON:0000489!2.42e-07!32;UBERON:0000487!2.45e-07!22;UBERON:0003075!3.00e-07!86;UBERON:0007284!3.00e-07!86;UBERON:0004119!4.82e-07!169;UBERON:0000925!4.82e-07!169;UBERON:0006595!4.82e-07!169;UBERON:0000948!5.42e-07!24;UBERON:0005498!5.42e-07!24;UBERON:0004140!5.42e-07!24;UBERON:0009881!5.42e-07!24;UBERON:0004141!5.42e-07!24;UBERON:0003084!5.42e-07!24;UBERON:0007005!5.42e-07!24;UBERON:0004139!5.42e-07!24;UBERON:0004291!5.42e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;2.73e-12;18!UBERON:0001986;2.73e-12;18!UBERON:0004852;2.73e-12;18!UBERON:0000487;1.17e-09;22!UBERON:0006914;3.02e-08;25!UBERON:0001638;3.82e-07;9!UBERON:0003920;3.82e-07;9!UBERON:0004582;3.82e-07;9!UBERON:0000490;4.34e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.92e-12,18;UBERON:0001986,2.92e-12,18;UBERON:0004852,2.92e-12,18;UBERON:0000487,1.23e-09,22;UBERON:0002294,2.83e-09,9;UBERON:0001173,2.83e-09,9;UBERON:0004912,2.83e-09,9;UBERON:0003914,3.06e-08,117;UBERON:0006914,3.15e-08,25;UBERON:0004872,8.87e-08,83;UBERON:0004111,9.99e-08,240;UBERON:0004145,1.20e-07,3;UBERON:0002049,1.25e-07,78;UBERON:0007798,1.25e-07,78;UBERON:0000055,2.26e-07,68;UBERON:0001009,2.31e-07,112;UBERON:0001638,4.26e-07,9;UBERON:0003920,4.26e-07,9;UBERON:0004582,4.26e-07,9;UBERON:0002394,4.41e-07,6;UBERON:0003928,4.41e-07,6;UBERON:0004535,6.63e-07,109;UBERON:0003915,9.66e-07,9;UBERON:0004700,9.66e-07,9;UBERON:0001917,9.66e-07,9 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.246242116153576,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.01210257911091,0.12786256184353,0,0,0,0,0,1.41802225746102,0.886917589850256,1.40535657109002,1.37528029272598,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.38856200643038,0,0.838998872419812,4.12677062910101,1.67195973229448,2.06733407335463,2.13459757612026,1.00416183829401,0.402829317109147,0.760272105718513,0,1.10298924103761,2.43042584364528,2.50039239195423,1.12264686313085,3.60356737546631,0,3.79706263827252,2.74802615895611,0,0,0.436094052142534,0,0.25326102332916,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.49333509683432,1.24484414159907,0.404132016209064,0.980771418680752,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0,0,0.277064115484183,0,0,0,1.02088964844019,0,0,0.423863802319124,0.300091096084402,0.309157587715317,0,0.18611685633159,0.168776332241266,0,0,0.0920498986422993,0,0.710019185033229,0,0,0.193260853163297,0,0.286804595389004,0,0,0.116193942869518,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0.38474715694639,2.21446636387394,2.80483547606892,0,0,0,0,1.18157981336281,0,0.122988438543114,0.514703430895577,0,0,0.201057944823262,0.0925884451585296,0,0,2.88662684050547,0.927443239800615,0.70445216541493,0.144366447761074,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500170521059677,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0.521301686808497,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0.511707249066704,0,0,0,0,0,0.519254429183621,0,0,1.20303882181971,0.460404944679482,0,0,0.131124414959424,0.451199612907412,0.847168708148562,0.784349769176855,1.46139224653261,0.633309773357254,0,0.340187410553031,0.647747748306418,3.08454505380579,0,0,0,0.831076008928724,0.223874754722178,0.219259876645935,0,0,0,0,1.13345112812495,0,0,0,0,0,0.096670718292122,0,0,0,0.107420244868274,0,0.0852266274161009,0.0890320356467374,0.661139661443912,0.576570202095319,0.765676274967505,0,0,0.31481234683064,0,0.616067160352178,0,0,0.55597265731176,0.429374660225974,0,0.316379424718726,0.38126038784765,0.255897791311334,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0.141405431953713,1.13008116620243,0,0,0,0,1.31178950409327,0.202910376962704,0.92947049429925,0.281695602532241,0.573645408816206,0.294747123039363,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.941438007767792,0.43050537267123,0,0.443430153536676,1.37834040124176,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,3.25559129225023,0,0,0,0,0,0,7.27954644546894,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,2.05111450980652,0.485442086998054,0,0,0,0,0,0.994147647766298,0.422008249231538,0.556543525114529,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0.988551862620595,1.43216939740487,0,0.986434056369336,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0.455173793141999,0.762760950878299,0,0,0,0,0,0.60298219312704,0,0.221158519862449,0,0,0.21787692703798,0,0.615602068030377,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0.421996129056054,7.83517479163909,0,0,0,0.530745387020035,0.611030144933625,0,0,0,0.134802265961354,1.60515529459758,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0.300646838828985,0.414752765588989,0,0,0,0,4.83836228250648,0,1.73559738335131,0.0979923974143777,1.39294730528644,0.34945333648406,0,0.19351266257817,0.292357268344742,0.164230914106418,0.387956065953678,0,0.677942222341597,0,0.19871461170299,0.379864775735272,0.195551382734803,1.20238230377301,1.06726497369676,0,5.33134543470192,0,0,0.14405479798815,0,0,0.135904206073614,0,0.509991088181609,0.866851769704557,0.600420288709789,1.23214841002794,0,0,0,0.279282401272254,0.687481272035051,2.87149209830726,0.199679000498991,0.429226048136571,2.4548860318606,1.88113722962834,0,0,0,0,0,0.78741985211799,0,0,0.408610218334727,0,0.137539436597234,0,0,0,0.0607495566580247,0.335434687599266,5.51639951094387,14.5299209133945,0.739202355635845,0,0,0.714695326373367,0.662091970365432,0,0,0,0.653174720218818,1.19730191562487,0,0,0,0.879313402068495,1.32506888912221,0.904980694530854,1.19009341568421,0,0,4.0579216775724,1.25763444079733,6.62782488555513,0,0,0,0,0,0.5013797880454,0.306345576763462,0,0,0,0.122026264901963,0.751145584238999,0.573409195690071,0.554645257684261,0.124192805882767,0,0.874862855734746,0,0,1.41159491818903,0,0,0,0,0,0,0,0,0.228840068396924,0,0.466311601748341,0,0.63718706865481,0,0,0,0,0,0,0,0.406870733204662,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,1.133529627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| ||
|short_description=p5@MECOM | |||
}} | }} |
Latest revision as of 14:25, 16 September 2015
Short description: | p5@MECOM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MECOM_5end |
Coexpression cluster: | C117_serous_clear_kidney_neuroectodermal_mesothelioma_endometrial_Intestinal |
Association with transcript: | 249bp_to_ENST00000464456, NM_001164000, uc003ffk.2_5end |
EntrezGene: | MECOM |
HGNC: | 3498 |
UniProt: | Q03112 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.35e-15 | 24 |
endothelial cell | 3.72e-14 | 36 |
blood vessel endothelial cell | 2.92e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.92e-12 | 18 |
vein endothelial cell | 7.13e-11 | 6 |
meso-epithelial cell | 1.64e-10 | 45 |
lining cell | 2.59e-08 | 58 |
barrier cell | 2.59e-08 | 58 |
endothelial cell of umbilical vein | 2.84e-08 | 3 |
epithelial cell of uterus | 2.11e-07 | 6 |
stromal cell of endometrium | 2.11e-07 | 6 |
seromucus secreting cell | 6.60e-07 | 2 |
endothelial cell of artery | 9.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.92e-12 | 18 |
endothelium | 2.92e-12 | 18 |
cardiovascular system endothelium | 2.92e-12 | 18 |
simple squamous epithelium | 1.23e-09 | 22 |
biliary system | 2.83e-09 | 9 |
biliary tree | 2.83e-09 | 9 |
biliary bud | 2.83e-09 | 9 |
epithelial tube | 3.06e-08 | 117 |
squamous epithelium | 3.15e-08 | 25 |
splanchnic layer of lateral plate mesoderm | 8.87e-08 | 83 |
anatomical conduit | 9.99e-08 | 240 |
outflow tract | 1.20e-07 | 3 |
vasculature | 1.25e-07 | 78 |
vascular system | 1.25e-07 | 78 |
vessel | 2.26e-07 | 68 |
circulatory system | 2.31e-07 | 112 |
vein | 4.26e-07 | 9 |
venous blood vessel | 4.26e-07 | 9 |
venous system | 4.26e-07 | 9 |
bile duct | 4.41e-07 | 6 |
digestive system duct | 4.41e-07 | 6 |
cardiovascular system | 6.63e-07 | 109 |
endothelial tube | 9.66e-07 | 9 |
arterial system endothelium | 9.66e-07 | 9 |
endothelium of artery | 9.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 2.11e-07 | 6 |
adenocarcinoma | 3.03e-07 | 25 |