FFCP PHASE1:Hg19::chr12:115122224..115122233,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6926 | |EntrezGene=6926 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11602 | |HGNC=11602 | ||
|TSSclassifier=strong | |||
|UniProt=C9JIZ8,O15119 | |UniProt=C9JIZ8,O15119 | ||
|association_with_transcript=-255bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | |association_with_transcript=-255bp_to_ENST00000349155,ENST00000361100,NM_005996,NM_016569,uc001tvt.1,uc001tvu.1,uc010syw.1_5end | ||
|cluster_id=chr12:115122224..115122233,- | |||
|coexpression_cluster_id=C43 | |coexpression_cluster_id=C43 | ||
|description=CAGE_peak_12_at_TBX3_5end | |description=CAGE_peak_12_at_TBX3_5end | ||
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|ontology_enrichment_celltype=CL:0002552!4.16e-08!5 | |ontology_enrichment_celltype=CL:0002552!4.16e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.18e-12;1!CL:0000333;7.60e-10;5!CL:0002602;9.01e-07;2 | |ontology_enrichment_celltype_v019=CL:0002553;1.18e-12;1!CL:0000333;7.60e-10;5!CL:0002602;9.01e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.11e-12,1;CL:0002602,8.06e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;7.14e-24;2!UBERON:0005754;7.02e-13;1!UBERON:0003124;1.18e-12;1 | |ontology_enrichment_development_v019=UBERON:0007297;7.14e-24;2!UBERON:0005754;7.02e-13;1!UBERON:0003124;1.18e-12;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;2.38e-08;6!DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | |ontology_enrichment_disease_v019=DOID:169;2.38e-08;6!DOID:4231;9.01e-07;2!DOID:1907;9.01e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:169,2.52e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000481!7.35e-08!347;UBERON:0001007!2.00e-07!155;UBERON:0001555!2.00e-07!155;UBERON:0007026!2.00e-07!155;UBERON:0003104!2.87e-07!238;UBERON:0009142!2.87e-07!238;UBERON:0004119!6.06e-07!169;UBERON:0000925!6.06e-07!169;UBERON:0006595!6.06e-07!169;UBERON:0005256!7.85e-07!143;UBERON:0002100!8.51e-07!216 | |ontology_enrichment_uberon=UBERON:0000481!7.35e-08!347;UBERON:0001007!2.00e-07!155;UBERON:0001555!2.00e-07!155;UBERON:0007026!2.00e-07!155;UBERON:0003104!2.87e-07!238;UBERON:0009142!2.87e-07!238;UBERON:0004119!6.06e-07!169;UBERON:0000925!6.06e-07!169;UBERON:0006595!6.06e-07!169;UBERON:0005256!7.85e-07!143;UBERON:0002100!8.51e-07!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0006947;7.02e-35;3!UBERON:0004054;7.02e-35;3!UBERON:0005904;2.40e-26;4!UBERON:0000998;7.02e-13;1!UBERON:0006868;7.02e-13;1!UBERON:0001000;7.88e-13;1!UBERON:0005352;7.88e-13;1!UBERON:0001301;8.84e-13;1!UBERON:0000996;2.75e-12;1!UBERON:0000058;6.62e-11;10!UBERON:0003135;5.81e-10;11!UBERON:0000013;7.60e-10;5!UBERON:0002410;7.60e-10;5!UBERON:0004175;7.27e-09;21!UBERON:0003101;1.81e-08;22!UBERON:0000079;1.81e-08;22!UBERON:0001255;9.01e-07;2!UBERON:0006444;9.01e-07;2!UBERON:0001995;9.01e-07;2!UBERON:0004715;9.01e-07;2!UBERON:0001556;9.01e-07;2!UBERON:0000077;9.34e-07;27 | |ontology_enrichment_uberon_v019=UBERON:0006947;7.02e-35;3!UBERON:0004054;7.02e-35;3!UBERON:0005904;2.40e-26;4!UBERON:0000998;7.02e-13;1!UBERON:0006868;7.02e-13;1!UBERON:0001000;7.88e-13;1!UBERON:0005352;7.88e-13;1!UBERON:0001301;8.84e-13;1!UBERON:0000996;2.75e-12;1!UBERON:0000058;6.62e-11;10!UBERON:0003135;5.81e-10;11!UBERON:0000013;7.60e-10;5!UBERON:0002410;7.60e-10;5!UBERON:0004175;7.27e-09;21!UBERON:0003101;1.81e-08;22!UBERON:0000079;1.81e-08;22!UBERON:0001255;9.01e-07;2!UBERON:0006444;9.01e-07;2!UBERON:0001995;9.01e-07;2!UBERON:0004715;9.01e-07;2!UBERON:0001556;9.01e-07;2!UBERON:0000077;9.34e-07;27 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,7.04e-35,3;UBERON:0004054,7.04e-35,3;UBERON:0005904,2.40e-26,4;UBERON:0000998,7.03e-13,1;UBERON:0006868,7.03e-13,1;UBERON:0001000,7.89e-13,1;UBERON:0005352,7.89e-13,1;UBERON:0001301,8.85e-13,1;UBERON:0000996,2.46e-12,1;UBERON:0004175,2.88e-11,25;UBERON:0003135,5.81e-10,11;UBERON:0003064,6.00e-10,28;UBERON:0000013,8.13e-10,5;UBERON:0002410,8.13e-10,5;UBERON:0003101,1.64e-08,22;UBERON:0000079,1.64e-08,22;UBERON:0001008,4.69e-08,48;UBERON:0000162,1.09e-07,14;UBERON:0001353,1.09e-07,14;UBERON:0000163,1.09e-07,14;UBERON:0006866,1.09e-07,14;UBERON:0000164,1.09e-07,14;UBERON:0000931,1.09e-07,14;UBERON:0004122,3.29e-07,15;UBERON:0001255,7.61e-07,2;UBERON:0001556,7.61e-07,2;UBERON:0006444,8.06e-07,2;UBERON:0001995,8.06e-07,2;UBERON:0004715,8.06e-07,2 | |||
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| ||
|short_description=p12@TBX3 | |short_description=p12@TBX3 | ||
}} | }} |
Latest revision as of 14:39, 16 September 2015
Short description: | p12@TBX3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_TBX3_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | -255bp_to_ENST00000349155, ENST00000361100, NM_005996, NM_016569, uc001tvt.1, uc001tvu.1, uc010syw.1_5end |
EntrezGene: | TBX3 |
HGNC: | 11602 |
UniProt: | C9JIZ8O15119 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.11e-12 | 1 |
annulus pulposus cell | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 7.04e-35 | 3 |
internal male genitalia | 7.04e-35 | 3 |
duct of male reproductive system | 2.40e-26 | 4 |
seminal vesicle | 7.03e-13 | 1 |
seminal fluid secreting gland | 7.03e-13 | 1 |
vas deferens | 7.89e-13 | 1 |
spermatic cord | 7.89e-13 | 1 |
epididymis | 8.85e-13 | 1 |
vagina | 2.46e-12 | 1 |
internal genitalia | 2.88e-11 | 25 |
male reproductive organ | 5.81e-10 | 11 |
intermediate mesoderm | 6.00e-10 | 28 |
sympathetic nervous system | 8.13e-10 | 5 |
autonomic nervous system | 8.13e-10 | 5 |
male organism | 1.64e-08 | 22 |
male reproductive system | 1.64e-08 | 22 |
renal system | 4.69e-08 | 48 |
cloaca | 1.09e-07 | 14 |
anal region | 1.09e-07 | 14 |
embryonic cloaca | 1.09e-07 | 14 |
terminal part of digestive tract | 1.09e-07 | 14 |
primitive urogenital sinus | 1.09e-07 | 14 |
proctodeum | 1.09e-07 | 14 |
genitourinary system | 3.29e-07 | 15 |
urinary bladder | 7.61e-07 | 2 |
lower urinary tract | 7.61e-07 | 2 |
annulus fibrosus | 8.06e-07 | 2 |
fibrocartilage | 8.06e-07 | 2 |
annulus fibrosus disci intervertebralis | 8.06e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 2.52e-08 | 6 |