FFCP PHASE1:Hg19::chr9:139890798..139890821,-: Difference between revisions
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|id=chr9:139890798..139890821,-
|short_description=p5@CLIC3
|description=CAGE_peak_5_at_CLIC3_5end
|association_with_transcript=198bp_to_ENST00000456673_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9022 | |EntrezGene=9022 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2064 | |HGNC=2064 | ||
|TSSclassifier=strong | |||
|UniProt=Q5SQ17 | |UniProt=Q5SQ17 | ||
|association_with_transcript=198bp_to_ENST00000456673_5end | |||
|cluster_id=chr9:139890798..139890821,- | |||
|coexpression_cluster_id=C44 | |||
|description=CAGE_peak_5_at_CLIC3_5end | |||
|id=chr9:139890798..139890821,- | |||
|ontology_enrichment_celltype=CL:0000784!1.99e-16!3;CL:0000623!3.46e-16!3;CL:0000825!3.46e-16!3;CL:0000767!8.92e-16!3;CL:0000842!9.38e-16!3;CL:0000738!2.49e-13!140;CL:0000224!6.15e-12!4;CL:0000037!6.61e-10!172;CL:0000566!6.61e-10!172;CL:0002087!3.25e-09!119;CL:0000988!4.37e-09!182;CL:0000080!4.23e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000784;5.77e-51;3!CL:0000623;4.37e-50;3!CL:0000767;8.98e-23;3!CL:0000451;1.87e-14;10!CL:0000625;4.83e-14;11!CL:0000094;3.70e-09;8!CL:0000791;8.08e-09;18!CL:0000789;8.08e-09;18!CL:0002419;8.08e-09;18!CL:0000081;6.74e-07;11!CL:0000542;7.09e-07;53!CL:0000226;9.11e-07;3!CL:0000842;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000784,5.78e-51,3;CL:0000623,3.70e-50,3;CL:0000825,3.70e-50,3;CL:0000767,1.56e-22,3;CL:0000738,1.60e-16,136;CL:0000451,1.87e-14,10;CL:0000625,4.62e-14,11;CL:0000037,3.15e-13,168;CL:0000988,1.64e-12,177;CL:0000838,2.97e-11,52;CL:0000542,4.88e-11,53;CL:0000051,4.88e-11,53;CL:0000094,4.54e-09,8;CL:0000791,7.86e-09,18;CL:0000789,7.86e-09,18;CL:0002420,7.86e-09,18;CL:0002419,7.86e-09,18;CL:0000790,7.86e-09,18;CL:0002087,1.42e-08,115;CL:0002032,1.60e-07,161;CL:0000837,1.60e-07,161;CL:0000226,7.70e-07,3;CL:0000842,7.70e-07,3;CL:0000081,7.82e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;8.08e-09;18!CL:0000051;7.09e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!4.13e-08!15;UBERON:0000179!4.13e-08!15;UBERON:0000463!4.13e-08!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p5@CLIC3 | |||
}} | }} |
Latest revision as of 14:53, 16 September 2015
Short description: | p5@CLIC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CLIC3_5end |
Coexpression cluster: | C44_Dendritic_CD19_CD133_granulocyte_acute_thymus_immature |
Association with transcript: | 198bp_to_ENST00000456673_5end |
EntrezGene: | CLIC3 |
HGNC: | 2064 |
UniProt: | Q5SQ17 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
plasmacytoid dendritic cell | 5.78e-51 | 3 |
natural killer cell | 3.70e-50 | 3 |
pro-NK cell | 3.70e-50 | 3 |
basophil | 1.56e-22 | 3 |
leukocyte | 1.60e-16 | 136 |
dendritic cell | 1.87e-14 | 10 |
CD8-positive, alpha-beta T cell | 4.62e-14 | 11 |
hematopoietic stem cell | 3.15e-13 | 168 |
hematopoietic cell | 1.64e-12 | 177 |
lymphoid lineage restricted progenitor cell | 2.97e-11 | 52 |
lymphocyte | 4.88e-11 | 53 |
common lymphoid progenitor | 4.88e-11 | 53 |
granulocyte | 4.54e-09 | 8 |
mature alpha-beta T cell | 7.86e-09 | 18 |
alpha-beta T cell | 7.86e-09 | 18 |
immature T cell | 7.86e-09 | 18 |
mature T cell | 7.86e-09 | 18 |
immature alpha-beta T cell | 7.86e-09 | 18 |
nongranular leukocyte | 1.42e-08 | 115 |
hematopoietic oligopotent progenitor cell | 1.60e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.60e-07 | 161 |
single nucleate cell | 7.70e-07 | 3 |
mononuclear cell | 7.70e-07 | 3 |
blood cell | 7.82e-07 | 11 |