FFCP PHASE1:Hg19::chr7:138145030..138145042,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:138145030..138145042,+
|short_description=p4@TRIM24
|description=CAGE_peak_4_at_TRIM24_5end
|association_with_transcript=-36bp_to_ENST00000343526,ENST00000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8805 | |EntrezGene=8805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11812 | |HGNC=11812 | ||
|TSSclassifier=strong | |||
|UniProt=O15164,C9JPT4 | |UniProt=O15164,C9JPT4 | ||
|association_with_transcript=-36bp_to_ENST00000343526,ENST00000452999,NM_003852,NM_015905,uc003vub.2,uc003vuc.2_5end | |||
|cluster_id=chr7:138145030..138145042,+ | |||
|description=CAGE_peak_4_at_TRIM24_5end | |||
|id=chr7:138145030..138145042,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.47e-12;6!CL:0000404;2.47e-12;6!CL:0002322;1.25e-11;5!CL:0002319;1.54e-11;25!CL:0000163;2.29e-09;9!CL:0002321;1.27e-07;15!CL:0002605;1.77e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.97e-15,8;CL:0000540,2.82e-12,6;CL:0000031,2.82e-12,6;CL:0000404,2.82e-12,6;CL:0002322,1.37e-11,5;CL:0002319,2.20e-11,25;CL:0000133,7.39e-11,59;CL:0000163,1.90e-09,9;CL:0000221,6.83e-08,72;CL:0002605,1.59e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000031;2.47e-12;6!UBERON:0009117;1.66e-08;10!UBERON:0005564;1.66e-08;10!CL:0000133;4.08e-07;59 | |||
|ontology_enrichment_disease=DOID:162!2.98e-12!235;DOID:14566!3.82e-11!239;DOID:0050686!8.83e-09!137 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;4.11e-08;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0.281908808191942,0,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.246242116153576,0,0.313454721478088,5.15224776835902,2.73748850145768,6.90484517771415,0.382067028739756,0.410502947249729,0.550975469195755,0.786728553697808,0,0.154816123316076,0,0.30120591877825,0.369754010166788,1.00707360754392,0.853015394924529,0.587200878669695,0.553995408531877,0,0,0.447830948479849,0,0,0.145398238779565,0,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,0.575384784644301,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,1.09162460023138,0,0,0,0,0,0,0,0.870627715885752,1.70215567407342,0.622822248995575,0.251248665256743,0.521482918420201,0.217188844705117,0,0,1.58231193720442,0,0.425208599930087,0.209658645508376,0.22465726229299,0,0.16072558669708,0,0,0.365328307529268,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0.587237189370939,0,2.64342657158052,2.24203425192614,0,0,0,0,0.334372990781356,0,0,1.94826728407911,0.111410456885174,0,0,0.270803863765016,0,0.260118695119756,0,0,0,0.14828656316206,1.07016331235885,0,0,0,0,0,0.318565414324097,0,0,0.150575119077773,0.255973222308837,0,0,0,0,0.267440195783507,0.434473211648397,0,0,0.383587685530591,0,0,0.144846518960824,0,0,0.567208902984407,0,0.43917392846563,0.72038491523742,0.364295288292542,0.370784442784429,0.649094787309367,0.174129737299267,0.132957960518865,0,0,0.371457501329565,0.198762407366705,0,0.347140501607594,0,0.419499436209906,0.550236083880135,0,0.516833518338658,1.06729878806013,0.33472061276467,0,0.760272105718513,0.24406205754817,0.735326160691737,0,0.17859945656816,0.898117490504679,0.450445921933289,0,0,0.183201743930407,0,0,0.436094052142534,0,0.25326102332916,0.529636723252875,0.573673241497627,0,0,0,0,0.311211035399766,0.269421344139376,0.490385709340376,0.151357427644931,0,0,0,0,0.149448680551801,0.352303495931295,0.323745888736263,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0.336672227908132,0.375355559615893,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.358779271377724,0,0,0,0,0,0,0,0.194874010322397,0,0.0920498986422993,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0,0,6.46460642486856,7.68672656264614,4.4153698290417,4.25010325563019,5.04641701751257,2.91981887260664,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0.220587945464788,0,0.474541238222193,0,0.196221465125346,0,0.738155454624648,0,0,0,3.80265104465493,0,1.18157981336281,0.441463099414651,2.09080345523293,0,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,1.04337364477569,0.469634776943287,0.144366447761074,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0.0895585227028483,0,0,0,1.32072651019839,2.48793738648926,1.15295962733569,2.14612136824846,0.190493682876507,0,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.07333828582095,0.775630294546667,0,0.845302752556,0,0,0,1.41849132023278,0.532844358032199,0.285955987316295,0,0,0.325736184293735,0,0,0.301439377059586,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0,0.896681151948218,0.197030760201927,0,0,1.01637849688985,2.60279707715243,3.86644406388848,2.51274398001523,1.27587750330633,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0.195801157462741,0,0.206768026122887,0.215714200818617,0.106727557803444,0.909382714338778,0,0,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0,1.57117284469109,0.200506470303285,0.184161977871793,0,0.182091168006717,0.262248829918848,0,0.462092022626489,0,0,0.527758144464379,0,0,0.215915916102139,0,0,1.00337954770971,0,0,0.447749509444357,1.31555925987561,0.522870902049801,0.256450125116389,0,0,1.03041011647722,0.915694648183434,0.577566499444116,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.15350367472613,0.137836572484531,0.107420244868274,0.145016693914229,0.511359764496605,0,0,0.192190067365106,0.638063562472921,0.4046311234222,0,0.62962469366128,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.272999822815972,0.141405431953713,0,0.551365343546124,0,0,0,0,0,0,0,0.430234056612155,0.491245205065606,0,0,0,0,0,0,0.192444225451024,0,0,0.659006605437454,0,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0,0.648473311192717,1.08006287447623,1.58625035258854,0.320472213382419,0,0,0.929015875628594,0.432807638929335,1.35169502361987,0.159426272728822,0.399158742865633,0.957526850661834,0.423347165447766,1.29848776109822,0.280797178113459,0.228234679033192,0.156679895773023,0,2.20079311142084,0.802940375518498,0.605399121573143,0.425846237690326,0,0.307240764308458,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,1.33228787199128,0,1.49712432326576,0.146508179271894,0.242721043499027,0.780103689942349,0.284136146806413,1.19372242368845,2.67268212749375,1.22864280839693,0,0.422008249231538,0.111308705022906,0.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| ||
|short_description=p4@TRIM24 | |||
}} | }} |
Latest revision as of 14:58, 16 September 2015
Short description: | p4@TRIM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM24_5end |
Coexpression cluster: | NA |
Association with transcript: | -36bp_to_ENST00000343526, ENST00000452999, NM_003852, NM_015905, uc003vub.2, uc003vuc.2_5end |
EntrezGene: | TRIM24 |
HGNC: | 11812 |
UniProt: | O15164C9JPT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.97e-15 | 8 |
neuron | 2.82e-12 | 6 |
neuroblast | 2.82e-12 | 6 |
electrically signaling cell | 2.82e-12 | 6 |
embryonic stem cell | 1.37e-11 | 5 |
neural cell | 2.20e-11 | 25 |
neurectodermal cell | 7.39e-11 | 59 |
endocrine cell | 1.90e-09 | 9 |
ectodermal cell | 6.83e-08 | 72 |
astrocyte of the cerebral cortex | 1.59e-07 | 3 |