FFCP PHASE1:Hg19::chr7:138145076..138145116,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:138145076..138145116,+ to FFCP PHASE1:Hg19::chr7:138145076..138145116,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8805 | |EntrezGene=8805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11812 | |HGNC=11812 | ||
|TSSclassifier=strong | |||
|UniProt=O15164,C9JPT4,B4DYZ9 | |UniProt=O15164,C9JPT4,B4DYZ9 | ||
|association_with_transcript=0bp_to_ENST00000343526,ENST00000452999,ENST00000536822,NM_003852,NM_015905,uc003vub.2,uc003vuc.2_5end | |||
|cluster_id=chr7:138145076..138145116,+ | |||
|description=CAGE_peak_3_at_TRIM24_5end | |||
|id=chr7:138145076..138145116,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.81e-15!172;CL:0000566!2.81e-15!172;CL:0002032!2.95e-13!165;CL:0000837!2.95e-13!165;CL:0000988!1.53e-12!182;CL:0000542!9.25e-09!53;CL:0000051!9.25e-09!53;CL:0000838!1.34e-08!52;CL:0000738!2.48e-08!140;CL:0002031!4.08e-07!124 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.36e-15,168;CL:0002032,2.56e-13,161;CL:0000837,2.56e-13,161;CL:0000988,9.71e-13,177;CL:0000542,9.11e-09,53;CL:0000051,9.11e-09,53;CL:0000838,1.32e-08,52;CL:0000738,2.34e-08,136;CL:0002031,3.85e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!5.97e-11!51;DOID:0060083!5.97e-11!51;DOID:1240!2.31e-10!39;DOID:0050686!4.65e-10!137;DOID:8692!7.82e-09!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.33e-09;31!DOID:1240;2.97e-08;39!DOID:2531;3.32e-07;51!DOID:0060083;3.32e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,5.85e-11,51;DOID:0060083,5.85e-11,51;DOID:1240,2.27e-10,39;DOID:0050686,5.51e-10,137;DOID:8692,7.70e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0000073!2.92e-07!94;UBERON:0001016!2.92e-07!94;UBERON:0001017!3.06e-07!82;UBERON:0005743!5.35e-07!86;UBERON:0007023!9.21e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.23e-07,89;UBERON:0001017,1.96e-07,81 | |||
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| ||
|short_description=p3@TRIM24 | |||
}} | }} |
Latest revision as of 14:58, 16 September 2015
Short description: | p3@TRIM24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM24_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000343526, ENST00000452999, ENST00000536822, NM_003852, NM_015905, uc003vub.2, uc003vuc.2_5end |
EntrezGene: | TRIM24 |
HGNC: | 11812 |
UniProt: | O15164C9JPT4B4DYZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.36e-15 | 168 |
hematopoietic oligopotent progenitor cell | 2.56e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.56e-13 | 161 |
hematopoietic cell | 9.71e-13 | 177 |
lymphocyte | 9.11e-09 | 53 |
common lymphoid progenitor | 9.11e-09 | 53 |
lymphoid lineage restricted progenitor cell | 1.32e-08 | 52 |
leukocyte | 2.34e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 3.85e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.23e-07 | 89 |
central nervous system | 1.96e-07 | 81 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 5.85e-11 | 51 |
immune system cancer | 5.85e-11 | 51 |
leukemia | 2.27e-10 | 39 |
organ system cancer | 5.51e-10 | 137 |
myeloid leukemia | 7.70e-09 | 31 |