FFCP PHASE1:Hg19::chr1:1297175..1297180,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54587 | |EntrezGene=54587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7542 | |HGNC=7542 | ||
|TSSclassifier=strong | |||
|UniProt=B3KTR6 | |UniProt=B3KTR6 | ||
|association_with_transcript=-18bp_to_ENST00000378864,ENST00000477278,uc001afa.2_5end | |association_with_transcript=-18bp_to_ENST00000378864,ENST00000477278,uc001afa.2_5end | ||
|cluster_id=chr1:1297175..1297180,- | |||
|description=CAGE_peak_13_at_MXRA8_5end | |description=CAGE_peak_13_at_MXRA8_5end | ||
|id=chr1:1297175..1297180,- | |id=chr1:1297175..1297180,- | ||
|ontology_enrichment_celltype=CL:0000057!2.04e-13!75;CL:0000055!1.68e-10!180;CL:0000133!9.80e-09!59;CL:0002552!4.02e-08!5;CL:0002559!1.40e-07!4;CL:0000221!5.45e-07!71 | |ontology_enrichment_celltype=CL:0000057!2.04e-13!75;CL:0000055!1.68e-10!180;CL:0000133!9.80e-09!59;CL:0002552!4.02e-08!5;CL:0002559!1.40e-07!4;CL:0000221!5.45e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.58e-25;3!CL:1000428;1.58e-25;3!CL:0000197;5.69e-23;6!CL:0000098;5.69e-23;6!CL:0002167;5.69e-23;6!CL:0002575;1.13e-17;2!CL:0002549;3.66e-17;2!CL:0002559;1.42e-15;5!CL:0002541;1.29e-12;3!CL:0000669;2.68e-09;4!CL:0000349;2.86e-07;19!CL:0000710;5.22e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,1.46e-25,3;CL:1000428,1.46e-25,3;CL:0000197,5.09e-23,6;CL:0000098,5.09e-23,6;CL:0002167,5.09e-23,6;CL:0002575,1.34e-17,2;CL:0002549,2.22e-17,2;CL:0002559,1.35e-15,5;CL:0002541,1.29e-12,3;CL:0000669,2.91e-09,4;CL:0000133,8.26e-08,59;CL:0000349,2.67e-07,19;CL:0000710,5.06e-07,20 | |||
|ontology_enrichment_development_v019=UBERON:0010115;3.74e-10;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1799;6.88e-10;1!DOID:10165;6.88e-10;1!DOID:1798;6.88e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.31e-10,1;DOID:10165,6.31e-10,1;DOID:1798,6.31e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000924!2.90e-17!173;UBERON:0006601!2.90e-17!173;UBERON:0004121!4.06e-17!169;UBERON:0005631!1.25e-14!14;UBERON:0000158!1.25e-14!14;UBERON:0000033!1.07e-12!123;UBERON:0003124!1.18e-11!7;UBERON:0000153!1.53e-11!129;UBERON:0007811!1.53e-11!129;UBERON:0002200!1.10e-10!11;UBERON:0006876!1.10e-10!11;UBERON:0000064!9.58e-10!219;UBERON:0002346!2.34e-09!90;UBERON:0003075!2.84e-09!86;UBERON:0007284!2.84e-09!86;UBERON:0002616!1.02e-08!59;UBERON:0000478!1.48e-08!24;UBERON:0004923!1.55e-08!57;UBERON:0001017!2.00e-08!82;UBERON:0005743!2.02e-08!86;UBERON:0000955!9.85e-08!69;UBERON:0006238!9.85e-08!69;UBERON:0000073!1.17e-07!94;UBERON:0001016!1.17e-07!94;UBERON:0002073!1.40e-07!4;UBERON:0005086!1.40e-07!4;UBERON:0000475!3.26e-07!365;UBERON:0001987!3.38e-07!4;UBERON:0004340!3.38e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.58e-25;3!UBERON:0001992;1.58e-25;3!UBERON:0005629;3.66e-17;2!UBERON:0005358;3.66e-17;2!UBERON:0001886;3.66e-17;2!UBERON:0004086;3.66e-17;2!UBERON:0005282;3.66e-17;2!UBERON:0005281;3.66e-17;2!UBERON:0002073;1.42e-15;5!UBERON:0003124;1.29e-12;3!UBERON:0000920;1.29e-12;3!UBERON:0002363;3.74e-10;1!UBERON:0002067;6.86e-09;9!UBERON:0005631;3.22e-08;10!UBERON:0000158;3.22e-08;10!UBERON:0005284;2.09e-07;5!UBERON:0006876;3.53e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.46e-25,3;UBERON:0001992,1.46e-25,3;UBERON:0005629,2.22e-17,2;UBERON:0005358,2.22e-17,2;UBERON:0001886,2.22e-17,2;UBERON:0004086,2.22e-17,2;UBERON:0005282,2.22e-17,2;UBERON:0005281,2.22e-17,2;UBERON:0002073,1.35e-15,5;UBERON:0005086,1.35e-15,5;UBERON:0000920,1.29e-12,3;UBERON:0003124,1.41e-11,7;UBERON:0002363,3.74e-10,1;UBERON:0007645,3.74e-10,1;UBERON:0007647,3.74e-10,1;UBERON:0010115,3.74e-10,1;UBERON:0005631,7.33e-10,14;UBERON:0000158,7.33e-10,14;UBERON:0002067,6.68e-09,9;UBERON:0004016,6.68e-09,9;UBERON:0010083,6.68e-09,9;UBERON:0005284,1.72e-07,5;UBERON:0006876,3.38e-07,11;UBERON:0004923,4.82e-07,66 | |||
|phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,1.51357427644931,1.72852777344,0.234321431833797,0.312160076830321,0,0,0,0,0,0.408308342509787,0.245668634623536,0.929932030581889,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0.751190294532984,0,0.538168907066586,0,0,0,0,0.515281080091258,0,0,0,0.504867548488229,0.0920498986422993,0.969876340912871,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,4.69348596989448,2.57296375277154,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,1.30788020649984,0.4400297149257,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,5.8231841228626,4.28229573113188,5.51958452618771,2.6942525448324,0.300946099727719,0,0,0,0,0,2.15381273209015,2.40200396667599,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0.496215615637554,0.767309866440312,0.561320188866147,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.87754158861589,0,0,0.0769502585037971,0,1.1528195219403,5.20594337576678,0,11.1650405906172,0.366390373607449,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,16.4916972830354,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,2.35477952092104,3.35186950783946,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,4.7143205006656,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0.54503513781167,0.856402095563933,0.563817616383885,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0,0,0,0,0,0,0.738726348460727,0.204000691244253,0.626909442956176,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.945348171640679,0.443458794925128,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0,0,1.51357427644931,1.72852777344,0.234321431833797,0.312160076830321,0,0,0,0,0,0.408308342509787,0.245668634623536,0.929932030581889,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0.751190294532984,0,0.538168907066586,0,0,0,0,0.515281080091258,0,0,0,0.504867548488229,0.0920498986422993,0.969876340912871,0,0.10075209822764,0.169560592310488,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,4.69348596989448,2.57296375277154,1.38134921352481,0.464367928031979,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.560655421726804,1.30788020649984,0.4400297149257,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0,0,0,0,0,0,0.773288812777695,0,0,0,0,0,0,0,0,5.8231841228626,4.28229573113188,5.51958452618771,2.6942525448324,0.300946099727719,0,0,0,0,0,2.15381273209015,2.40200396667599,0,0,0,0.303127571446259,1.66435439510497,0.907170879989041,0.496215615637554,0.767309866440312,0.561320188866147,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0.232420756919918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.632758849437452,0,0,0,0.318203247925937,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43246690842614,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.591095237907095,0.87754158861589,0,0,0.0769502585037971,0,1.1528195219403,5.20594337576678,0,11.1650405906172,0.366390373607449,11.72676507241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0,0,0,0,16.4916972830354,0,0,0.664653872707185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.316553979779393,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0.372578417648301,0,0,0,0,0,0,0.144921028610825,0,0.233713309847224,0,0,0.50313580350515,0,0,0.151230923763239,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920529751259204,0,0,0,0,0,0,0,0,2.35477952092104,3.35186950783946,0,0,0,0,0,0.128458450192919,0,0,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,4.7143205006656,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0.203909198930495,0.0657727735628491,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0.286679166302903,0,0.271965960763659,0,0,0,0.462175628631418,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p13@MXRA8 | |short_description=p13@MXRA8 | ||
}} | }} |
Latest revision as of 15:06, 16 September 2015
Short description: | p13@MXRA8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_MXRA8_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000378864, ENST00000477278, uc001afa.2_5end |
EntrezGene: | MXRA8 |
HGNC: | 7542 |
UniProt: | B3KTR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 1.46e-25 | 3 |
stem cell of epidermis | 1.46e-25 | 3 |
receptor cell | 5.09e-23 | 6 |
sensory epithelial cell | 5.09e-23 | 6 |
olfactory epithelial cell | 5.09e-23 | 6 |
central nervous system pericyte | 1.34e-17 | 2 |
fibroblast of choroid plexus | 2.22e-17 | 2 |
hair follicle cell | 1.35e-15 | 5 |
chorionic membrane mesenchymal stem cell | 1.29e-12 | 3 |
pericyte cell | 2.91e-09 | 4 |
neurectodermal cell | 8.26e-08 | 59 |
extraembryonic cell | 2.67e-07 | 19 |
neurecto-epithelial cell | 5.06e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.46e-25 | 3 |
papillary layer of dermis | 1.46e-25 | 3 |
vascular plexus | 2.22e-17 | 2 |
ventricle of nervous system | 2.22e-17 | 2 |
choroid plexus | 2.22e-17 | 2 |
brain ventricle | 2.22e-17 | 2 |
ventricular system of brain | 2.22e-17 | 2 |
ventricular system of central nervous system | 2.22e-17 | 2 |
hair follicle | 1.35e-15 | 5 |
hair follicle placode | 1.35e-15 | 5 |
egg chorion | 1.29e-12 | 3 |
chorion | 1.41e-11 | 7 |
dura mater | 3.74e-10 | 1 |
future meninx | 3.74e-10 | 1 |
ectomeninx | 3.74e-10 | 1 |
future dura mater | 3.74e-10 | 1 |
extraembryonic membrane | 7.33e-10 | 14 |
membranous layer | 7.33e-10 | 14 |
dermis | 6.68e-09 | 9 |
dermatome | 6.68e-09 | 9 |
future dermis | 6.68e-09 | 9 |
brain vasculature | 1.72e-07 | 5 |
vasculature of organ | 3.38e-07 | 11 |
organ component layer | 4.82e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.31e-10 | 1 |
endocrine pancreas cancer | 6.31e-10 | 1 |
pancreatic endocrine carcinoma | 6.31e-10 | 1 |