FFCP PHASE1:Hg19::chr13:113841579..113841679,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:113841579..113841679,-
|short_description=p2@PCID2
|description=CAGE_peak_2_at_PCID2_5end
|association_with_transcript=33bp_to_ENST00000473462_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55795 | |EntrezGene=55795 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25653 | |HGNC=25653 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=33bp_to_ENST00000473462_5end | |||
|cluster_id=chr13:113841579..113841679,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_PCID2_5end | |||
|id=chr13:113841579..113841679,- | |||
|ontology_enrichment_celltype=CL:0000860!7.99e-22!45;CL:0002057!3.60e-20!42;CL:0002194!7.79e-16!63;CL:0000576!7.79e-16!63;CL:0000040!7.79e-16!63;CL:0000559!7.79e-16!63;CL:0002009!1.85e-14!65;CL:0000839!1.82e-12!70;CL:0000766!9.98e-12!76;CL:0000057!1.28e-11!75;CL:0000557!1.60e-11!71;CL:0000213!1.75e-08!57;CL:0000215!1.75e-08!57;CL:0002620!1.97e-07!23;CL:0000548!2.09e-07!679;CL:0000004!2.09e-07!679;CL:0000255!2.09e-07!679;CL:0000063!2.48e-07!578;CL:0000012!3.03e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.34e-25;33!CL:0002057;8.34e-25;33!CL:0000473;5.35e-20;39!CL:0000234;5.35e-20;39!CL:0000576;6.03e-12;48!CL:0000766;1.83e-07;69!CL:0000077;7.92e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.81e-23,42;CL:0002057,6.81e-23,42;CL:0000473,3.82e-22,48;CL:0000234,3.82e-22,48;CL:0002194,1.28e-14,59;CL:0000576,1.28e-14,59;CL:0000040,1.28e-14,59;CL:0000559,1.28e-14,59;CL:0002009,1.11e-13,61;CL:0000766,4.08e-12,72;CL:0000839,1.30e-11,66;CL:0000557,3.06e-11,67;CL:0000057,7.51e-09,76;CL:0000213,9.93e-09,58;CL:0000215,9.93e-09,58;CL:0000077,7.11e-07,19;CL:0002320,9.26e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;2.90e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.07e-11!80;UBERON:0004765!1.54e-11!101;UBERON:0001434!1.54e-11!101;UBERON:0001474!4.79e-11!86;UBERON:0002204!2.95e-07!167;UBERON:0002405!3.23e-07!115;UBERON:0002193!5.17e-07!112;UBERON:0002384!8.34e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;4.36e-07;9!UBERON:0001557;4.36e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,5.78e-11,100;UBERON:0002371,2.61e-10,76;UBERON:0002405,2.79e-10,93;UBERON:0001474,7.73e-10,82;UBERON:0004765,1.02e-09,90;UBERON:0002193,9.85e-08,108;UBERON:0001737,4.57e-07,9;UBERON:0002384,7.99e-07,371 | |||
|phase1_expression=3.08853244759946,1.2846031433459,0.704772020479856,3.00219895059391,0,0.872338524100369,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,2.72285976512103,1.32558950291166,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0.684372125364421,0.87879847716362,0,0,0,3.93364276848904,6.90892916574983,5.41856431606266,0,0,0,0,0.284338464974843,0,8.30993112797816,2.60707781711184,4.77423915574874,0.447830948479849,0,0.257575567634187,15.4122133106339,9.06902264853143,3.63876091781724,35.7940716834754,18.913722849004,11.1494293522237,42.8661664560004,30.483124076963,16.553756092201,67.9148991051139,34.8561729135266,14.8969135253776,27.2951392336777,11.1891521523717,8.7642158933583,41.0152415777009,18.2929545433373,7.03270838378945,21.1104832119498,19.1485111316767,6.39337125799041,90.2550732134896,23.8301794370279,16.1933784738849,42.2097757631329,29.2030434315313,14.986030284653,66.5939452896706,26.5159897911047,19.304205633894,0.633765858935825,0.850417199860174,0.838634582033504,0.561643155732475,1.20141514273205,0,0.855038231223746,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.434473211648397,0,0.670700859703636,0.767175371061182,2.89151321907653,1.00267582127178,0.579386075843295,0.795285947051099,0,0.567208902984407,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,2.98143611050058,2.58070378531837,0.694281003215189,0.56530794192401,1.67799774483962,0.825354125820202,0.417989933073621,4.39308490587859,2.13459757612026,4.01664735317604,8.05658634218294,3.80136052859256,1.46437234528902,2.20597848207521,0,2.05389375053383,0.898117490504679,1.0135033243499,3.06633274931766,0,0.366403487860815,0,0,0,1.49091585508596,1.39293562831038,0.529636723252875,2.0078563452417,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,1.75123873690594,1.30769522490767,0.302714855289863,0.576175924479999,3.51482147750695,0.624320153660641,0.570471821544449,1.19558944441441,2.46612447151906,2.5899671098901,2.38766371393822,6.73708765141148,4.66770405784718,3.61640234115179,1.18800285728205,0.741800787835671,0,0,2.86171393721913,2.25213335769535,12.7449493122724,0.438977620880838,2.75839016219118,0.600952235626387,0.453728732640084,5.91985797773244,0.427114777637135,1.05965950579781,6.00182192168805,1.95799805553034,7.47157566132325,2.41951913231067,3.37552664482532,0.974370051611986,2.52433774244115,0.644349290496095,0.646584227275248,4.61512470271599,1.81353776809752,3.56077243852024,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,4.37735160147422,3.37169380156203,2.41011029883482,4.30146493656336,3.7039505495709,2.60997681022206,4.31460186112526,3.72820783738158,2.30848294167834,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,1.71567810298526,0.109750285408626,0,0.100528972411631,0,1.95484983186195,1.03993478527958,0,0.695582429850461,0.469634776943287,7.65142173133691,5.09284063834272,4.37584550139576,0.790204397959275,0,0.738651018262192,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,2.34942208881025,0.763976851116555,0,1.71072446022705,2.77634230298973,1.20137223137567,0.285826432630578,3.81245686774226,1.30788020649984,4.8403268641827,0.775630294546667,3.57656445851882,2.535908257668,1.32969058292435,3.12022310734098,0.771622122786426,2.83698264046557,0.266422179016099,1.42977993658148,0,0,1.62868092146868,1.42156779497018,0,0.301439377059586,0.871533458600294,0.099972991182057,2.43247561282381,1.00451418286425,0,0.958499421966331,0,0,2.60606352001643,1.64381058040307,4.29746311775749,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,1.08506009479894,1.87173775377726,1.24900292158013,1.26161932027148,0.702848489956279,0.300946099727719,0,0,0,0,0.955719759148911,1.76221041716467,0.686286847621712,0.620304078368662,2.37285620900479,1.17400313583789,1.21251028578504,0,1.81434175997808,1.73675465473144,3.22270143904931,0.841980283299221,0.896974044789907,2.55853624533352,1.44768529029247,1.48418066444991,1.23367755042124,0.887808626565635,2.87445046048332,0.519254429183621,1.85936605535935,0,0,0.184161977871793,1.60740227430449,1.45672934405374,1.18011973463482,0,0.15403067420883,0,0,0,2.27466768141793,2.38131187387122,4.10240240594065,0,0,0.501689773854853,0,0,0.671624264166535,0,0.261435451024901,0.769350375349168,1.96808787419823,0.325378394664303,0.824328093181778,0.457847324091717,0.082509499920588,0,0,0,0.096670718292122,3.08097234229289,0.307007349452259,1.51620229732984,0.214840489736547,0.435050081742686,0.767039646744908,0,0.165284915360978,0.19219006736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|phase1_expression=3.08853244759946,1.2846031433459,0.704772020479856,3.00219895059391,0,0.872338524100369,0,1.26343974685366,0.261185628199839,0.245733936501509,0,0,0,2.72285976512103,1.32558950291166,0,0,0,0,0.246242116153576,0.816002764977012,0,0,0.684372125364421,0.87879847716362,0,0,0,3.93364276848904,6.90892916574983,5.41856431606266,0,0,0,0,0.284338464974843,0,8.30993112797816,2.60707781711184,4.77423915574874,0.447830948479849,0,0.257575567634187,15.4122133106339,9.06902264853143,3.63876091781724,35.7940716834754,18.913722849004,11.1494293522237,42.8661664560004,30.483124076963,16.553756092201,67.9148991051139,34.8561729135266,14.8969135253776,27.2951392336777,11.1891521523717,8.7642158933583,41.0152415777009,18.2929545433373,7.03270838378945,21.1104832119498,19.1485111316767,6.39337125799041,90.2550732134896,23.8301794370279,16.1933784738849,42.2097757631329,29.2030434315313,14.986030284653,66.5939452896706,26.5159897911047,19.304205633894,0.633765858935825,0.850417199860174,0.838634582033504,0.561643155732475,1.20141514273205,0,0.855038231223746,0.19891667719909,0.91332076882317,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,1.68152568894461,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0.201606743224732,0,0.434473211648397,0,0.670700859703636,0.767175371061182,2.89151321907653,1.00267582127178,0.579386075843295,0.795285947051099,0,0.567208902984407,0.221729397462564,0.263504357079378,0.130979075497713,0,0,0,0.348259474598534,0.531831842075461,0.238490624305342,0,0,2.98143611050058,2.58070378531837,0.694281003215189,0.56530794192401,1.67799774483962,0.825354125820202,0.417989933073621,4.39308490587859,2.13459757612026,4.01664735317604,8.05658634218294,3.80136052859256,1.46437234528902,2.20597848207521,0,2.05389375053383,0.898117490504679,1.0135033243499,3.06633274931766,0,0.366403487860815,0,0,0,1.49091585508596,1.39293562831038,0.529636723252875,2.0078563452417,0.709336764396714,0.560677600142307,0,0.24666754841716,0.622422070799533,1.75123873690594,1.30769522490767,0.302714855289863,0.576175924479999,3.51482147750695,0.624320153660641,0.570471821544449,1.19558944441441,2.46612447151906,2.5899671098901,2.38766371393822,6.73708765141148,4.66770405784718,3.61640234115179,1.18800285728205,0.741800787835671,0,0,2.86171393721913,2.25213335769535,12.7449493122724,0.438977620880838,2.75839016219118,0.600952235626387,0.453728732640084,5.91985797773244,0.427114777637135,1.05965950579781,6.00182192168805,1.95799805553034,7.47157566132325,2.41951913231067,3.37552664482532,0.974370051611986,2.52433774244115,0.644349290496095,0.646584227275248,4.61512470271599,1.81353776809752,3.56077243852024,0.193260853163297,0,0,0,0,0.116193942869518,0.10366105501537,0,0.36497735907583,0,0,1.38134921352481,0.464367928031979,0.721879481669586,4.37735160147422,3.37169380156203,2.41011029883482,4.30146493656336,3.7039505495709,2.60997681022206,4.31460186112526,3.72820783738158,2.30848294167834,0.738155454624648,0,0,0,0,0,0,0,0.245976877086227,1.71567810298526,0.109750285408626,0,0.100528972411631,0,1.95484983186195,1.03993478527958,0,0.695582429850461,0.469634776943287,7.65142173133691,5.09284063834272,4.37584550139576,0.790204397959275,0,0.738651018262192,1.17002132569619,1.0404181360211,0,0,0,0,0,0,0,0,0,0.144119953416961,0.12624243342638,2.34942208881025,0.763976851116555,0,1.71072446022705,2.77634230298973,1.20137223137567,0.285826432630578,3.81245686774226,1.30788020649984,4.8403268641827,0.775630294546667,3.57656445851882,2.535908257668,1.32969058292435,3.12022310734098,0.771622122786426,2.83698264046557,0.266422179016099,1.42977993658148,0,0,1.62868092146868,1.42156779497018,0,0.301439377059586,0.871533458600294,0.099972991182057,2.43247561282381,1.00451418286425,0,0.958499421966331,0,0,2.60606352001643,1.64381058040307,4.29746311775749,0,0.394061520403854,0.215627574859517,0.256686072559497,0,0,0,0,0.637938751653163,0,0,0,0.613457458595699,1.00034104211935,1.08506009479894,1.87173775377726,1.24900292158013,1.26161932027148,0.702848489956279,0.300946099727719,0,0,0,0,0.955719759148911,1.76221041716467,0.686286847621712,0.620304078368662,2.37285620900479,1.17400313583789,1.21251028578504,0,1.81434175997808,1.73675465473144,3.22270143904931,0.841980283299221,0.896974044789907,2.55853624533352,1.44768529029247,1.48418066444991,1.23367755042124,0.887808626565635,2.87445046048332,0.519254429183621,1.85936605535935,0,0,0.184161977871793,1.60740227430449,1.45672934405374,1.18011973463482,0,0.15403067420883,0,0,0,2.27466768141793,2.38131187387122,4.10240240594065,0,0,0.501689773854853,0,0,0.671624264166535,0,0.261435451024901,0.769350375349168,1.96808787419823,0.325378394664303,0.824328093181778,0.457847324091717,0.082509499920588,0,0,0,0.096670718292122,3.08097234229289,0.307007349452259,1.51620229732984,0.214840489736547,0.435050081742686,0.767039646744908,0,0.165284915360978,0.19219006736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| ||
|short_description=p2@PCID2 | |||
}} | }} |
Latest revision as of 15:30, 16 September 2015
Short description: | p2@PCID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PCID2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 33bp_to_ENST00000473462_5end |
EntrezGene: | PCID2 |
HGNC: | 25653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.81e-23 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.81e-23 | 42 |
defensive cell | 3.82e-22 | 48 |
phagocyte | 3.82e-22 | 48 |
monopoietic cell | 1.28e-14 | 59 |
monocyte | 1.28e-14 | 59 |
monoblast | 1.28e-14 | 59 |
promonocyte | 1.28e-14 | 59 |
macrophage dendritic cell progenitor | 1.11e-13 | 61 |
myeloid leukocyte | 4.08e-12 | 72 |
myeloid lineage restricted progenitor cell | 1.30e-11 | 66 |
granulocyte monocyte progenitor cell | 3.06e-11 | 67 |
fibroblast | 7.51e-09 | 76 |
lining cell | 9.93e-09 | 58 |
barrier cell | 9.93e-09 | 58 |
mesothelial cell | 7.11e-07 | 19 |
connective tissue cell | 9.26e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 5.78e-11 | 100 |
bone marrow | 2.61e-10 | 76 |
immune system | 2.79e-10 | 93 |
bone element | 7.73e-10 | 82 |
skeletal element | 1.02e-09 | 90 |
hemolymphoid system | 9.85e-08 | 108 |
larynx | 4.57e-07 | 9 |
connective tissue | 7.99e-07 | 371 |