FFCP PHASE1:Hg19::chr13:113841728..113841765,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55795 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25653 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-15bp_to_ENST00000473462_5end | |||
|cluster_id=chr13:113841728..113841765,- | |||
|description=CAGE_peak_3_at_PCID2_5end | |||
|id=chr13:113841728..113841765,- | |||
|ontology_enrichment_celltype=CL:0000057!1.30e-15!75;CL:0000860!9.43e-15!45;CL:0000548!2.64e-14!679;CL:0000004!2.64e-14!679;CL:0000255!2.64e-14!679;CL:0000012!3.46e-14!682;CL:0002057!8.39e-14!42;CL:0000055!1.62e-13!180;CL:0000144!2.55e-12!625;CL:0000048!7.75e-11!430;CL:0002371!8.17e-11!591;CL:0000003!4.39e-10!722;CL:0000723!4.89e-10!436;CL:0002194!2.82e-09!63;CL:0000576!2.82e-09!63;CL:0000040!2.82e-09!63;CL:0000559!2.82e-09!63;CL:0002620!3.00e-09!23;CL:0000034!3.62e-09!444;CL:0002320!6.23e-09!365;CL:0002009!2.04e-08!65;CL:0000134!5.01e-08!358;CL:0000063!5.56e-08!578;CL:0000219!1.90e-07!390;CL:0000839!4.42e-07!70;CL:0000766!5.24e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-12;33!CL:0002057;1.01e-12;33!CL:0002620;2.12e-10;23!CL:0000473;6.30e-09;39!CL:0000234;6.30e-09;39!CL:0000077;1.14e-07;19!CL:0000576;2.34e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.34e-14,42;CL:0002057,3.34e-14,42;CL:0000057,5.24e-14,76;CL:0000473,2.50e-12,48;CL:0000234,2.50e-12,48;CL:0002620,1.97e-10,23;CL:0002320,1.78e-08,361;CL:0002194,4.32e-08,59;CL:0000576,4.32e-08,59;CL:0000040,4.32e-08,59;CL:0000559,4.32e-08,59;CL:0000134,5.79e-08,354;CL:0000219,8.22e-08,386;CL:0000048,8.39e-08,427;CL:0000077,1.07e-07,19;CL:0002009,1.45e-07,61;CL:0000723,2.69e-07,433;CL:0000766,4.43e-07,72;CL:0000034,6.13e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.15e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.01e-10!167;UBERON:0002384!1.56e-08!375;UBERON:0004765!4.16e-08!101;UBERON:0001434!4.16e-08!101;UBERON:0003102!4.22e-07!95 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001434,2.09e-08,100;UBERON:0003102,4.16e-08,99;UBERON:0002384,6.28e-08,371;UBERON:0002204,6.69e-07,167 | |||
|phase1_expression=0.54503513781167,0.642301571672949,0.422863212287913,0,0,0.872338524100369,2.53299878168311,1.26343974685366,0.522371256399677,0,0,0.218441372130172,0,3.7129905888014,1.98838425436749,0.672325146451775,0,0.730310090387373,0,0.246242116153576,0,0,0,0.958120975510189,0.753255837568817,0,0,0,2.75354993794233,3.0706351847777,0.77408061658038,0,0,0,0,0,0,7.20194031091441,3.40925560699241,4.99125002646459,0.223915474239924,0,0,1.45398238779565,0.377875943688809,0.485168122375632,2.09186133215116,1.6446715520873,2.16794459626573,2.01384674625505,2.0492856522328,0.47296445977717,10.6871161028352,3.87290810150296,5.41705946377367,1.50593871634084,1.91034305040492,1.57306439111559,5.20342617030534,3.20929027076094,1.91801137739712,0.659702600373432,0.997318288108159,0.426224750532694,21.4754836585152,5.10646702222026,4.35975574296902,2.26123798731069,1.5644487552606,1.08594422352558,15.1349875658342,7.36555271975129,7.91155968602211,0.422510572623884,1.06302149982522,0.419317291016752,0.22465726229299,0.150176892841506,0.16072558669708,0.285012743741249,0,0.547992461293902,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0.113309342697566,0.766440987203842,0,0,0,0,0,0.150575119077773,0.383959833463255,0,0.236777252044017,0,1.00803371612366,2.94184215361858,0.724122019413995,0,0,0.383587685530591,0.722878304769133,0,0.869079113764942,0,0,0.756278537312543,0.443458794925128,0.87834785693126,0,0,0,0.324547393654683,0,0.398873881556595,0.238490624305342,0,0,0.198762407366705,0,0,0,0.419499436209906,0.275118041940067,0.626984899610432,0.775250277507987,1.06729878806013,0.33472061276467,0,0.760272105718513,0,0,0.81014194788176,0.0892997282840798,0.22452937262617,0,0,0.949265659568129,0.183201743930407,1.31780417436063,0,0,0,0.886413581652058,1.05927344650575,1.14734648299525,1.06400514659507,1.68203280042692,0,0.24666754841716,0.933633106199299,0.269421344139376,0.490385709340376,0.302714855289863,0,2.10889288650417,0.312160076830321,1.71141546463335,1.49448680551801,1.52664848236894,1.61872944368132,2.52811452064047,2.85815839756851,5.89604723096486,2.27316718586684,2.37600571456411,2.71993622206413,0.910161361938026,0,3.70339450698946,3.87867411603089,6.37247465613621,1.75591048352335,2.75839016219118,0.751190294532984,0.567160915800105,3.94657198515496,2.56268866582281,2.54318281391474,3.00091096084402,2.26715564324566,2.31876486041066,1.8611685633159,0.506328996723799,0.487185025805993,1.00973509697646,2.48534726334208,0.969876340912871,0.355009592516614,1.20902517873168,4.0694542154517,0,0,0.286804595389004,0,0,0,0.207322110030741,0,0,0,0,1.38134921352481,0.928735856063958,2.88751792667834,0.946454400318751,1.01150814046861,0,1.21323370005633,1.74303555273925,0.71181185733329,1.21348177344148,0.392442930250692,1.92373578473195,0,0,0,0,0,0,0,0,0,1.54411029268673,0.109750285408626,0,0.100528972411631,0,3.58389135841357,1.03993478527958,4.3299402607582,0.463721619900307,0.821860859650752,0,0,0.190254152234598,0,0,0,0.234004265139238,0.148631162288728,0,0,0,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0.190493682876507,1.14596527667483,0,0,1.02827492703324,0.300343057843917,0,1.45770409648969,0.87192013766656,1.7601188597028,0.387815147273333,0,0.845302752556,1.59562869950922,3.12022310734098,0.771622122786426,0,0.799266537048298,0.857867961948885,0.542621605391443,0,1.62868092146868,0.355391948742546,0,0,0,0,0,0,2.10833939483032,2.15662369942424,3.44585807502342,0,0.723906533337896,0.61642896765115,1.07436577943937,0.112085143993527,0.591092280605782,2.37190332345469,0.898401253958239,0,1.30139853857622,0,0,0.637938751653163,0,0,0,0.981531933753119,1.50051156317903,0.813795071099207,1.66376689224646,2.67643483195743,3.94256037584837,2.57711112983969,0.300946099727719,0,1.03473071292505,0.664225598535437,0.368738337083406,2.34585759063824,0.587403472388222,0,0,0.431428401637234,0.426910231213777,2.12189300012382,0,3.32629322662648,0.992431231275107,1.07423381301644,0.280660094433074,1.15325234330131,0,0.804269605718038,0,0.925258162815933,0.355123450626254,1.47828880824856,1.03850885836724,0.813472649219715,0.120859449591622,0,0.0920809889358963,3.21480454860899,2.54927635209404,1.18011973463482,0,0.231046011313244,0.784349769176855,0,0,0,0,0.647747748306418,0,0,0,0,0,0.895499018888713,0.877039506583738,0,2.82095137628028,1.64007322849853,0.325378394664303,0.206082023295445,0.366277859273374,0.247528499761764,0,0.650060246036521,0,0.193341436584244,0.462145851343933,0.460511024178389,0.551346289938122,0.859361958946189,0.435050081742686,0.340906509664404,0.267096106940212,0,0,0.127612712494584,0,0.464845549297286,0.31481234683064,0.6970372701606,0.616067160352178,0,0,0,0.143124886741991,1.116475108079,5.06207079549961,1.71567174531442,0.255897791311334,0.42793898803392,1.59101623962968,0,0.899362287916574,0.823611089208164,1.88499843753098,1.01091240786658,0,0.421258456238981,1.95053495635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| |||
|short_description=p3@PCID2 | |||
}} |
Latest revision as of 15:31, 16 September 2015
Short description: | p3@PCID2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PCID2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_ENST00000473462_5end |
EntrezGene: | PCID2 |
HGNC: | 25653 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.34e-14 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.34e-14 | 42 |
fibroblast | 5.24e-14 | 76 |
defensive cell | 2.50e-12 | 48 |
phagocyte | 2.50e-12 | 48 |
skin fibroblast | 1.97e-10 | 23 |
connective tissue cell | 1.78e-08 | 361 |
monopoietic cell | 4.32e-08 | 59 |
monocyte | 4.32e-08 | 59 |
monoblast | 4.32e-08 | 59 |
promonocyte | 4.32e-08 | 59 |
mesenchymal cell | 5.79e-08 | 354 |
motile cell | 8.22e-08 | 386 |
multi fate stem cell | 8.39e-08 | 427 |
mesothelial cell | 1.07e-07 | 19 |
macrophage dendritic cell progenitor | 1.45e-07 | 61 |
somatic stem cell | 2.69e-07 | 433 |
myeloid leukocyte | 4.43e-07 | 72 |
stem cell | 6.13e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
skeletal system | 2.09e-08 | 100 |
surface structure | 4.16e-08 | 99 |
connective tissue | 6.28e-08 | 371 |
musculoskeletal system | 6.69e-07 | 167 |