FFCP PHASE1:Hg19::chr10:119301691..119301711,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | ||
|HGNC=18511 | |HGNC=18511 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=118bp_to_ENST00000450314_5end | |association_with_transcript=118bp_to_ENST00000450314_5end | ||
|cluster_id=chr10:119301691..119301711,- | |||
|coexpression_cluster_id=C1298 | |coexpression_cluster_id=C1298 | ||
|description=CAGE_peak_7_at_EMX2OS_5end | |description=CAGE_peak_7_at_EMX2OS_5end |
Latest revision as of 15:33, 16 September 2015
Short description: | p7@EMX2OS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_EMX2OS_5end |
Coexpression cluster: | C1298_ductus_seminal_Fibroblast_kidney_uterus_epididymis_mesenchymal |
Association with transcript: | 118bp_to_ENST00000450314_5end |
EntrezGene: | NA |
HGNC: | 18511 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p7@EMX2OS |
---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.44e-20 | 23 |
fat cell | 2.50e-13 | 15 |
subcutaneous fat cell | 5.93e-09 | 3 |
fibroblast | 5.69e-07 | 76 |
Showing 1 to 4 of 4 entries
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 8.40e-21 | 22 |
cerebral hemisphere | 6.82e-20 | 32 |
telencephalon | 1.73e-18 | 34 |
cerebral cortex | 5.74e-18 | 25 |
pallium | 5.74e-18 | 25 |
regional part of telencephalon | 1.20e-17 | 32 |
neocortex | 6.36e-17 | 20 |
regional part of forebrain | 1.97e-16 | 41 |
forebrain | 1.97e-16 | 41 |
anterior neural tube | 1.97e-16 | 41 |
Showing 1 to 10 of 38 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.13e-14 | 5 |
myotonic disease | 8.13e-14 | 5 |
muscle tissue disease | 8.13e-14 | 5 |
myopathy | 8.13e-14 | 5 |
muscular disease | 8.13e-14 | 5 |
myotonic dystrophy | 8.13e-14 | 5 |
cell type benign neoplasm | 2.49e-09 | 3 |
leiomyoma | 2.49e-09 | 3 |
benign neoplasm | 4.53e-07 | 4 |
Showing 1 to 9 of 9 entries