FFCP PHASE1:Hg19::chr20:46415051..46415069,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55959 | |EntrezGene=55959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20392 | |HGNC=20392 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=228bp_to_ENST00000467815_5end | |association_with_transcript=228bp_to_ENST00000467815_5end | ||
|cluster_id=chr20:46415051..46415069,- | |||
|description=CAGE_peak_17_at_SULF2_5end | |description=CAGE_peak_17_at_SULF2_5end | ||
|id=chr20:46415051..46415069,- | |id=chr20:46415051..46415069,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.63e-15;3!CL:0002195;6.41e-11;2!CL:0002571;6.41e-11;2!CL:0000632;7.76e-08;3 | |ontology_enrichment_celltype_v019=CL:0002178;1.63e-15;3!CL:0002195;6.41e-11;2!CL:0002571;6.41e-11;2!CL:0000632;7.76e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.58e-15,3;CL:0002195,1.30e-10,2;CL:0002571,1.30e-10,2;CL:0000632,6.80e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:299;4.94e-15;25!DOID:5093;1.75e-12;4!DOID:1612;1.75e-12;4 | |ontology_enrichment_disease_v019=DOID:299;4.94e-15;25!DOID:5093;1.75e-12;4!DOID:1612;1.75e-12;4 | ||
|ontology_enrichment_disease_v019_2=DOID:299,3.58e-15,25;DOID:5093,1.32e-12,4;DOID:1612,1.32e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.57e-11!115;UBERON:0000468!1.95e-09!659;UBERON:0000062!2.27e-08!511;UBERON:0000467!3.76e-07!625;UBERON:0000480!4.59e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!7.57e-11!115;UBERON:0000468!1.95e-09!659;UBERON:0000062!2.27e-08!511;UBERON:0000467!3.76e-07!625;UBERON:0000480!4.59e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;1.64e-09;5!UBERON:0010039;1.64e-09;5!UBERON:0002423;7.21e-07;25 | |ontology_enrichment_uberon_v019=UBERON:0000945;1.64e-09;5!UBERON:0010039;1.64e-09;5!UBERON:0002423;7.21e-07;25 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0009497,8.34e-07,25;UBERON:0000015,8.34e-07,25;UBERON:0002423,8.34e-07,25;UBERON:0006235,8.34e-07,25;UBERON:0004161,8.34e-07,25 | |||
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| ||
|short_description=p17@SULF2 | |short_description=p17@SULF2 | ||
}} | }} |
Latest revision as of 16:44, 16 September 2015
Short description: | p17@SULF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_17_at_SULF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 228bp_to_ENST00000467815_5end |
EntrezGene: | SULF2 |
HGNC: | 20392 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.58e-15 | 3 |
hepatic stem cell | 1.30e-10 | 2 |
hepatic mesenchymal stem cell | 1.30e-10 | 2 |
hepatic stellate cell | 6.80e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of foregut-midgut junction | 8.34e-07 | 25 |
anatomical boundary | 8.34e-07 | 25 |
hepatobiliary system | 8.34e-07 | 25 |
foregut-midgut junction | 8.34e-07 | 25 |
septum transversum | 8.34e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
adenocarcinoma | 3.58e-15 | 25 |
thoracic cancer | 1.32e-12 | 4 |
breast cancer | 1.32e-12 | 4 |