FFCP PHASE1:Hg19::chr14:94845856..94845857,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5265 | |EntrezGene=5265 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=8941 | |HGNC=8941 | ||
|TSSclassifier=strong | |||
|UniProt=P01009 | |UniProt=P01009 | ||
|association_with_transcript=-37bp_to_V00496_5end | |association_with_transcript=-37bp_to_V00496_5end | ||
|cluster_id=chr14:94845856..94845857,- | |||
|coexpression_cluster_id=C129 | |coexpression_cluster_id=C129 | ||
|description=CAGE_peak_43_at_SERPINA1_5end | |description=CAGE_peak_43_at_SERPINA1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!1.01e-26!12;CL:0000417!1.01e-26!12;CL:0000668!1.01e-26!12;CL:0000414!1.01e-26!12;CL:0000412!1.01e-26!12;CL:0000182!1.01e-26!12 | |ontology_enrichment_celltype=CL:0000181!1.01e-26!12;CL:0000417!1.01e-26!12;CL:0000668!1.01e-26!12;CL:0000414!1.01e-26!12;CL:0000412!1.01e-26!12;CL:0000182!1.01e-26!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.92e-07;12 | |ontology_enrichment_celltype_v019=CL:0000182;7.92e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,7.48e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;5.49e-25;11!UBERON:0009497;2.40e-21;13!UBERON:0001041;6.23e-10;30!UBERON:0003104;6.23e-10;31 | |ontology_enrichment_development_v019=UBERON:0004161;5.49e-25;11!UBERON:0009497;2.40e-21;13!UBERON:0001041;6.23e-10;30!UBERON:0003104;6.23e-10;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!1.80e-37!19;UBERON:0006925!1.80e-37!19;UBERON:0008836!1.80e-37!19;UBERON:0008835!2.20e-32!22;UBERON:0003894!2.20e-32!22;UBERON:0009854!5.56e-31!23;UBERON:0007499!1.63e-28!25;UBERON:0009497!1.63e-28!25;UBERON:0000015!1.63e-28!25;UBERON:0002423!1.63e-28!25;UBERON:0006235!1.63e-28!25;UBERON:0004161!1.63e-28!25;UBERON:0005057!2.02e-27!26;UBERON:0009856!2.02e-27!26;UBERON:0002365!5.17e-23!31;UBERON:0002330!5.17e-23!31;UBERON:0002368!2.17e-20!35;UBERON:0003929!8.75e-18!54;UBERON:0002530!2.90e-16!59;UBERON:0000949!7.32e-16!45;UBERON:0005172!5.68e-13!55;UBERON:0005173!5.68e-13!55;UBERON:0002417!1.09e-11!61;UBERON:0000916!1.09e-11!61;UBERON:0005911!1.21e-11!82;UBERON:0002405!1.25e-10!115;UBERON:0005177!7.20e-09!107;UBERON:0002240!6.78e-08!3;UBERON:0000077!3.13e-07!130;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0001041!3.17e-07!98;UBERON:0000490!8.62e-07!138 | |ontology_enrichment_uberon=UBERON:0002107!1.80e-37!19;UBERON:0006925!1.80e-37!19;UBERON:0008836!1.80e-37!19;UBERON:0008835!2.20e-32!22;UBERON:0003894!2.20e-32!22;UBERON:0009854!5.56e-31!23;UBERON:0007499!1.63e-28!25;UBERON:0009497!1.63e-28!25;UBERON:0000015!1.63e-28!25;UBERON:0002423!1.63e-28!25;UBERON:0006235!1.63e-28!25;UBERON:0004161!1.63e-28!25;UBERON:0005057!2.02e-27!26;UBERON:0009856!2.02e-27!26;UBERON:0002365!5.17e-23!31;UBERON:0002330!5.17e-23!31;UBERON:0002368!2.17e-20!35;UBERON:0003929!8.75e-18!54;UBERON:0002530!2.90e-16!59;UBERON:0000949!7.32e-16!45;UBERON:0005172!5.68e-13!55;UBERON:0005173!5.68e-13!55;UBERON:0002417!1.09e-11!61;UBERON:0000916!1.09e-11!61;UBERON:0005911!1.21e-11!82;UBERON:0002405!1.25e-10!115;UBERON:0005177!7.20e-09!107;UBERON:0002240!6.78e-08!3;UBERON:0000077!3.13e-07!130;UBERON:0004921!3.13e-07!129;UBERON:0004185!3.13e-07!129;UBERON:0001041!3.17e-07!98;UBERON:0000490!8.62e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.08e-19;31!UBERON:0002330;1.08e-19;31!UBERON:0002368;1.94e-16;33!UBERON:0000949;1.02e-12;43!UBERON:0005172;1.70e-09;52!UBERON:0005173;1.70e-09;52!UBERON:0001007;2.91e-07;81 | |ontology_enrichment_uberon_v019=UBERON:0002107;4.52e-32;19!UBERON:0006925;4.52e-32;19!UBERON:0002423;1.10e-24;25!UBERON:0002365;1.08e-19;31!UBERON:0002330;1.08e-19;31!UBERON:0002368;1.94e-16;33!UBERON:0000949;1.02e-12;43!UBERON:0005172;1.70e-09;52!UBERON:0005173;1.70e-09;52!UBERON:0001007;2.91e-07;81 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.52e-32,19;UBERON:0006925,4.52e-32,19;UBERON:0008836,4.52e-32,19;UBERON:0008835,7.08e-28,22;UBERON:0003894,7.08e-28,22;UBERON:0009854,1.01e-26,23;UBERON:0007499,1.10e-24,25;UBERON:0009497,1.10e-24,25;UBERON:0000015,1.10e-24,25;UBERON:0002423,1.10e-24,25;UBERON:0006235,1.10e-24,25;UBERON:0004161,1.10e-24,25;UBERON:0009856,8.76e-24,26;UBERON:0002365,3.79e-20,31;UBERON:0002330,3.79e-20,31;UBERON:0002368,5.55e-18,35;UBERON:0000949,3.03e-14,45;UBERON:0003929,4.68e-12,54;UBERON:0005172,4.68e-12,54;UBERON:0005173,4.68e-12,54;UBERON:0002530,3.99e-11,59;UBERON:0002417,5.86e-11,60;UBERON:0000916,5.86e-11,60;UBERON:0005911,2.70e-08,82;UBERON:0001041,7.10e-08,87;UBERON:0005177,6.45e-07,101 | |||
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|short_description=p43@SERPINA1 | |short_description=p43@SERPINA1 | ||
}} | }} |
Latest revision as of 17:49, 16 September 2015
Short description: | p43@SERPINA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_43_at_SERPINA1_5end |
Coexpression cluster: | C129_liver_Hepatocyte_colon_duodenum_temporal_testicular_small |
Association with transcript: | -37bp_to_V00496_5end |
EntrezGene: | SERPINA1 |
HGNC: | 8941 |
UniProt: | P01009 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 7.48e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.52e-32 | 19 |
digestive gland | 4.52e-32 | 19 |
liver bud | 4.52e-32 | 19 |
hepatic diverticulum | 7.08e-28 | 22 |
liver primordium | 7.08e-28 | 22 |
digestive tract diverticulum | 1.01e-26 | 23 |
epithelial sac | 1.10e-24 | 25 |
epithelium of foregut-midgut junction | 1.10e-24 | 25 |
anatomical boundary | 1.10e-24 | 25 |
hepatobiliary system | 1.10e-24 | 25 |
foregut-midgut junction | 1.10e-24 | 25 |
septum transversum | 1.10e-24 | 25 |
sac | 8.76e-24 | 26 |
exocrine gland | 3.79e-20 | 31 |
exocrine system | 3.79e-20 | 31 |
endocrine gland | 5.55e-18 | 35 |
endocrine system | 3.03e-14 | 45 |
gut epithelium | 4.68e-12 | 54 |
abdomen element | 4.68e-12 | 54 |
abdominal segment element | 4.68e-12 | 54 |
gland | 3.99e-11 | 59 |
abdominal segment of trunk | 5.86e-11 | 60 |
abdomen | 5.86e-11 | 60 |
endo-epithelium | 2.70e-08 | 82 |
foregut | 7.10e-08 | 87 |
trunk region element | 6.45e-07 | 101 |