FFCP PHASE1:Hg19::chr7:140340159..140340169,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27147 | |EntrezGene=27147 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22212 | |HGNC=22212 | ||
|TSSclassifier=strong | |||
|UniProt=C9IYZ8 | |UniProt=C9IYZ8 | ||
|association_with_transcript=-61bp_to_ENST00000477488_5end | |association_with_transcript=-61bp_to_ENST00000477488_5end | ||
|cluster_id=chr7:140340159..140340169,- | |||
|description=CAGE_peak_2_at_DENND2A_5end | |description=CAGE_peak_2_at_DENND2A_5end | ||
|id=chr7:140340159..140340169,- | |id=chr7:140340159..140340169,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000346;4.85e-18;3!CL:1000428;4.85e-18;3!CL:0002575;8.32e-13;2!CL:0002559;4.98e-11;5!CL:0000239;1.51e-08;3!CL:1000615;1.51e-08;3!CL:0000708;1.51e-08;3!CL:0002306;1.51e-08;3!CL:0000222;2.09e-07;1!CL:0002591;8.00e-07;1!CL:0000669;8.25e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,2.18e-18,3;CL:1000428,2.18e-18,3;CL:0002575,8.36e-13,2;CL:0002559,3.11e-11,5;CL:0000708,1.18e-08,3;CL:0000239,1.49e-08,3;CL:1000615,1.49e-08,3;CL:0002306,1.49e-08,3;CL:0000669,8.27e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010227;8.00e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.17e-11!115;UBERON:0000481!2.12e-10!347;UBERON:0000064!5.83e-10!219;UBERON:0000475!1.63e-09!365;UBERON:0000062!2.14e-09!511;UBERON:0000119!1.19e-08!312;UBERON:0000477!1.10e-07!286;UBERON:0000483!1.31e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;4.85e-18;3!UBERON:0001992;4.85e-18;3!UBERON:0002073;4.98e-11;5!UBERON:0002106;1.51e-08;3!UBERON:0006853;1.51e-08;3!UBERON:0007685;1.51e-08;3!UBERON:0003210;1.51e-08;3!UBERON:0004134;1.51e-08;3!UBERON:0005795;3.07e-07;1!UBERON:0007029;8.00e-07;1!UBERON:0002079;8.00e-07;1!UBERON:0002135;8.00e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,2.18e-18,3;UBERON:0001992,2.18e-18,3;UBERON:0002073,3.11e-11,5;UBERON:0005086,3.11e-11,5;UBERON:0003210,1.18e-08,3;UBERON:0002106,1.23e-08,3;UBERON:0004854,1.23e-08,3;UBERON:0009034,1.23e-08,3;UBERON:0002095,1.23e-08,3;UBERON:0004782,1.23e-08,3;UBERON:0003281,1.23e-08,3;UBERON:0009664,1.23e-08,3;UBERON:0002296,1.23e-08,3;UBERON:0005602,1.23e-08,3;UBERON:0001179,1.23e-08,3;UBERON:0006293,1.23e-08,3;UBERON:0006853,1.49e-08,3;UBERON:0007685,1.49e-08,3;UBERON:0004134,1.49e-08,3;UBERON:0007029,7.15e-07,1;UBERON:0002079,7.57e-07,1 | |||
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| ||
|short_description=p2@DENND2A | |short_description=p2@DENND2A | ||
}} | }} |
Latest revision as of 18:09, 16 September 2015
Short description: | p2@DENND2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DENND2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -61bp_to_ENST00000477488_5end |
EntrezGene: | DENND2A |
HGNC: | 22212 |
UniProt: | C9IYZ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 2.18e-18 | 3 |
stem cell of epidermis | 2.18e-18 | 3 |
central nervous system pericyte | 8.36e-13 | 2 |
hair follicle cell | 3.11e-11 | 5 |
leptomeningeal cell | 1.18e-08 | 3 |
brush border epithelial cell | 1.49e-08 | 3 |
kidney cortex tubule cell | 1.49e-08 | 3 |
epithelial cell of proximal tubule | 1.49e-08 | 3 |
pericyte cell | 8.27e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 2.18e-18 | 3 |
papillary layer of dermis | 2.18e-18 | 3 |
hair follicle | 3.11e-11 | 5 |
hair follicle placode | 3.11e-11 | 5 |
blood-cerebrospinal fluid barrier | 1.18e-08 | 3 |
spleen | 1.23e-08 | 3 |
gastrointestinal system mesentery | 1.23e-08 | 3 |
stomach region | 1.23e-08 | 3 |
mesentery | 1.23e-08 | 3 |
gastrointestinal system serosa | 1.23e-08 | 3 |
mesentery of stomach | 1.23e-08 | 3 |
gut mesentery | 1.23e-08 | 3 |
dorsal mesentery | 1.23e-08 | 3 |
dorsal mesogastrium | 1.23e-08 | 3 |
peritoneal cavity | 1.23e-08 | 3 |
spleen primordium | 1.23e-08 | 3 |
renal cortex tubule | 1.49e-08 | 3 |
region of nephron tubule | 1.49e-08 | 3 |
proximal tubule | 1.49e-08 | 3 |
surface | 7.15e-07 | 1 |
left cardiac atrium | 7.57e-07 | 1 |