FFCP PHASE1:Hg19::chr14:95080869..95080876,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=12 | |EntrezGene=12 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |HGNC=16 | ||
|TSSclassifier=strong | |||
|UniProt=P01011 | |UniProt=P01011 | ||
|association_with_transcript=27bp_to_J05176_5end | |association_with_transcript=27bp_to_J05176_5end | ||
|cluster_id=chr14:95080869..95080876,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_18_at_SERPINA3_5end | |description=CAGE_peak_18_at_SERPINA3_5end | ||
|id=chr14:95080869..95080876,+ | |id=chr14:95080869..95080876,+ | ||
|ontology_enrichment_celltype=CL:0000181!6.28e-10!12;CL:0000417!6.28e-10!12;CL:0000668!6.28e-10!12;CL:0000414!6.28e-10!12;CL:0000412!6.28e-10!12;CL:0000182!6.28e-10!12;CL:0000746!1.78e-07!3;CL:0000513!1.78e-07!3 | |ontology_enrichment_celltype=CL:0000181!6.28e-10!12;CL:0000417!6.28e-10!12;CL:0000668!6.28e-10!12;CL:0000414!6.28e-10!12;CL:0000412!6.28e-10!12;CL:0000182!6.28e-10!12;CL:0000746!1.78e-07!3;CL:0000513!1.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000182;4.42e-22;12!CL:0000746;1.14e-10;3!CL:0000737;2.52e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.42e-22,12;CL:0000746,1.09e-10,3;CL:0000513,1.09e-10,3;CL:0000737,2.43e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.83e-11;11!CL:0000513;1.14e-10;3!UBERON:0009497;1.08e-09;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-20!115;UBERON:0002298!5.77e-20!8;UBERON:0006331!2.43e-14!3;UBERON:0002308!1.37e-12!9;UBERON:0000125!1.37e-12!9;UBERON:0001049!4.41e-12!57;UBERON:0005068!4.41e-12!57;UBERON:0006241!4.41e-12!57;UBERON:0007135!4.41e-12!57;UBERON:0002107!1.05e-11!19;UBERON:0006925!1.05e-11!19;UBERON:0008836!1.05e-11!19;UBERON:0002616!1.30e-11!59;UBERON:0001017!1.62e-11!82;UBERON:0000955!7.24e-11!69;UBERON:0006238!7.24e-11!69;UBERON:0005743!7.96e-11!86;UBERON:0000949!1.31e-10!45;UBERON:0002950!1.83e-10!2;UBERON:0001891!1.83e-10!2;UBERON:0009616!1.83e-10!2;UBERON:0001875!3.06e-10!2;UBERON:0006514!3.06e-10!2;UBERON:0002148!4.23e-10!2;UBERON:0009662!4.23e-10!2;UBERON:0008835!5.71e-10!22;UBERON:0003894!5.71e-10!22;UBERON:0003075!1.35e-09!86;UBERON:0007284!1.35e-09!86;UBERON:0009854!1.72e-09!23;UBERON:0000073!1.75e-09!94;UBERON:0001016!1.75e-09!94;UBERON:0002368!1.90e-09!35;UBERON:0000025!4.53e-09!194;UBERON:0002346!5.00e-09!90;UBERON:0002020!7.39e-09!34;UBERON:0003528!7.39e-09!34;UBERON:0007499!1.19e-08!25;UBERON:0009497!1.19e-08!25;UBERON:0000015!1.19e-08!25;UBERON:0002423!1.19e-08!25;UBERON:0006235!1.19e-08!25;UBERON:0004161!1.19e-08!25;UBERON:0005057!2.79e-08!26;UBERON:0009856!2.79e-08!26;UBERON:0000477!9.67e-08!286;UBERON:0003076!3.01e-07!15;UBERON:0003057!3.01e-07!15;UBERON:0000988!5.28e-07!3;UBERON:0004111!5.60e-07!241;UBERON:0003080!5.91e-07!42;UBERON:0003929!7.51e-07!54;UBERON:0002365!8.74e-07!31;UBERON:0002330!8.74e-07!31;UBERON:0001896!9.34e-07!3;UBERON:0005290!9.34e-07!3;UBERON:0010096!9.34e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.65e-37;19!UBERON:0006925;1.65e-37;19!UBERON:0002423;1.20e-28;25!UBERON:0002365;3.94e-23;31!UBERON:0002330;3.94e-23;31!UBERON:0002368;5.22e-20;33!UBERON:0000949;4.63e-19;43!UBERON:0005172;1.90e-10;52!UBERON:0005173;1.90e-10;52!UBERON:0002417;4.28e-08;58!UBERON:0000916;4.28e-08;58!UBERON:0002530;1.26e-07;57!UBERON:0001007;1.69e-07;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.65e-37,19;UBERON:0006925,1.65e-37,19;UBERON:0008836,1.65e-37,19;UBERON:0008835,1.78e-32,22;UBERON:0003894,1.78e-32,22;UBERON:0009854,4.34e-31,23;UBERON:0007499,1.20e-28,25;UBERON:0009497,1.20e-28,25;UBERON:0000015,1.20e-28,25;UBERON:0002423,1.20e-28,25;UBERON:0006235,1.20e-28,25;UBERON:0004161,1.20e-28,25;UBERON:0009856,1.45e-27,26;UBERON:0002365,3.34e-23,31;UBERON:0002330,3.34e-23,31;UBERON:0000949,7.37e-23,45;UBERON:0002368,1.32e-20,35;UBERON:0003929,1.67e-13,54;UBERON:0005172,1.67e-13,54;UBERON:0005173,1.67e-13,54;UBERON:0002530,2.17e-12,59;UBERON:0002417,3.45e-12,60;UBERON:0000916,3.45e-12,60;UBERON:0005177,2.42e-10,101;UBERON:0005911,5.32e-09,82;UBERON:0003914,5.86e-09,117;UBERON:0005256,1.35e-08,122;UBERON:0001041,1.69e-08,87;UBERON:0002100,3.86e-07,199;UBERON:0000490,4.16e-07,148 | |||
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| ||
|short_description=p18@SERPINA3 | |short_description=p18@SERPINA3 | ||
}} | }} |
Latest revision as of 18:44, 16 September 2015
Short description: | p18@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 27bp_to_J05176_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.42e-22 | 12 |
cardiac muscle cell | 1.09e-10 | 3 |
cardiac muscle myoblast | 1.09e-10 | 3 |
striated muscle cell | 2.43e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
liver | 1.65e-37 | 19 |
digestive gland | 1.65e-37 | 19 |
liver bud | 1.65e-37 | 19 |
hepatic diverticulum | 1.78e-32 | 22 |
liver primordium | 1.78e-32 | 22 |
digestive tract diverticulum | 4.34e-31 | 23 |
epithelial sac | 1.20e-28 | 25 |
epithelium of foregut-midgut junction | 1.20e-28 | 25 |
anatomical boundary | 1.20e-28 | 25 |
hepatobiliary system | 1.20e-28 | 25 |
foregut-midgut junction | 1.20e-28 | 25 |
septum transversum | 1.20e-28 | 25 |
sac | 1.45e-27 | 26 |
exocrine gland | 3.34e-23 | 31 |
exocrine system | 3.34e-23 | 31 |
endocrine system | 7.37e-23 | 45 |
endocrine gland | 1.32e-20 | 35 |
gut epithelium | 1.67e-13 | 54 |
abdomen element | 1.67e-13 | 54 |
abdominal segment element | 1.67e-13 | 54 |
gland | 2.17e-12 | 59 |
abdominal segment of trunk | 3.45e-12 | 60 |
abdomen | 3.45e-12 | 60 |
trunk region element | 2.42e-10 | 101 |
endo-epithelium | 5.32e-09 | 82 |
epithelial tube | 5.86e-09 | 117 |
trunk mesenchyme | 1.35e-08 | 122 |
foregut | 1.69e-08 | 87 |
trunk | 3.86e-07 | 199 |
unilaminar epithelium | 4.16e-07 | 148 |