FFCP PHASE1:Hg19::chr1:145727640..145727651,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5174 | |EntrezGene=5174 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8821 | |HGNC=8821 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T2W1,B4DPB9,E7EU02 | |UniProt=Q5T2W1,B4DPB9,E7EU02 | ||
|association_with_transcript=-14bp_to_NM_001201325,NM_001201326,NM_002614_5end | |association_with_transcript=-14bp_to_NM_001201325,NM_001201326,NM_002614_5end | ||
|cluster_id=chr1:145727640..145727651,+ | |||
|coexpression_cluster_id=C276 | |coexpression_cluster_id=C276 | ||
|description=CAGE_peak_5_at_PDZK1_5end | |description=CAGE_peak_5_at_PDZK1_5end | ||
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|ontology_enrichment_celltype=CL:0000181!3.33e-09!12;CL:0000417!3.33e-09!12;CL:0000668!3.33e-09!12;CL:0000414!3.33e-09!12;CL:0000412!3.33e-09!12;CL:0000182!3.33e-09!12;CL:0000223!1.00e-08!59;CL:0000066!3.48e-07!254 | |ontology_enrichment_celltype=CL:0000181!3.33e-09!12;CL:0000417!3.33e-09!12;CL:0000668!3.33e-09!12;CL:0000414!3.33e-09!12;CL:0000412!3.33e-09!12;CL:0000182!3.33e-09!12;CL:0000223!1.00e-08!59;CL:0000066!3.48e-07!254 | ||
|ontology_enrichment_celltype_v019=CL:0002563;2.36e-10;4!CL:0000182;1.08e-07;12 | |ontology_enrichment_celltype_v019=CL:0002563;2.36e-10;4!CL:0000182;1.08e-07;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.29e-10,4;CL:0000182,1.16e-07,12;CL:0000223,3.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.69e-29;3!UBERON:0003104;8.21e-11;31!UBERON:0003918;2.53e-09;10!UBERON:0007687;2.53e-09;10 | |ontology_enrichment_development_v019=UBERON:0006215;4.69e-29;3!UBERON:0003104;8.21e-11;31!UBERON:0003918;2.53e-09;10!UBERON:0007687;2.53e-09;10 | ||
|ontology_enrichment_disease=DOID:4468!2.45e-07!2;DOID:305!5.07e-07!106;DOID:299!5.73e-07!25 | |ontology_enrichment_disease=DOID:4468!2.45e-07!2;DOID:305!5.07e-07!106;DOID:299!5.73e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!5.26e-13!14;UBERON:0000158!5.26e-13!14;UBERON:0005172!1.05e-12!55;UBERON:0005173!1.05e-12!55;UBERON:0003124!4.74e-11!7;UBERON:0002417!4.76e-11!61;UBERON:0000916!4.76e-11!61;UBERON:0009497!5.44e-11!25;UBERON:0000015!5.44e-11!25;UBERON:0002423!5.44e-11!25;UBERON:0006235!5.44e-11!25;UBERON:0004161!5.44e-11!25;UBERON:0003929!7.77e-10!54;UBERON:0002107!9.91e-10!19;UBERON:0006925!9.91e-10!19;UBERON:0008836!9.91e-10!19;UBERON:0008835!3.27e-08!22;UBERON:0003894!3.27e-08!22;UBERON:0005911!4.09e-08!82;UBERON:0009854!8.56e-08!23;UBERON:0001987!1.75e-07!4;UBERON:0004340!1.75e-07!4;UBERON:0004119!1.85e-07!169;UBERON:0000925!1.85e-07!169;UBERON:0006595!1.85e-07!169;UBERON:0007499!4.63e-07!25;UBERON:0000478!5.00e-07!24;UBERON:0005177!6.15e-07!107;UBERON:0005057!9.75e-07!26;UBERON:0009856!9.75e-07!26 | |ontology_enrichment_uberon=UBERON:0005631!5.26e-13!14;UBERON:0000158!5.26e-13!14;UBERON:0005172!1.05e-12!55;UBERON:0005173!1.05e-12!55;UBERON:0003124!4.74e-11!7;UBERON:0002417!4.76e-11!61;UBERON:0000916!4.76e-11!61;UBERON:0009497!5.44e-11!25;UBERON:0000015!5.44e-11!25;UBERON:0002423!5.44e-11!25;UBERON:0006235!5.44e-11!25;UBERON:0004161!5.44e-11!25;UBERON:0003929!7.77e-10!54;UBERON:0002107!9.91e-10!19;UBERON:0006925!9.91e-10!19;UBERON:0008836!9.91e-10!19;UBERON:0008835!3.27e-08!22;UBERON:0003894!3.27e-08!22;UBERON:0005911!4.09e-08!82;UBERON:0009854!8.56e-08!23;UBERON:0001987!1.75e-07!4;UBERON:0004340!1.75e-07!4;UBERON:0004119!1.85e-07!169;UBERON:0000925!1.85e-07!169;UBERON:0006595!1.85e-07!169;UBERON:0007499!4.63e-07!25;UBERON:0000478!5.00e-07!24;UBERON:0005177!6.15e-07!107;UBERON:0005057!9.75e-07!26;UBERON:0009856!9.75e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;7.38e-15;6!UBERON:0001242;2.36e-10;4!UBERON:0001262;2.36e-10;4!UBERON:0004786;2.36e-10;4!UBERON:0004808;2.36e-10;4!UBERON:0001277;2.36e-10;4!UBERON:0002680;4.31e-10;9!UBERON:0001895;4.31e-10;9!UBERON:0002107;2.74e-08;19!UBERON:0006925;2.74e-08;19!UBERON:0004733;1.08e-07;12!UBERON:0002028;1.08e-07;12!UBERON:0004732;3.89e-07;13!UBERON:0002368;4.48e-07;33!UBERON:0005409;9.67e-07;22 | |ontology_enrichment_uberon_v019=UBERON:0002037;7.38e-15;6!UBERON:0001242;2.36e-10;4!UBERON:0001262;2.36e-10;4!UBERON:0004786;2.36e-10;4!UBERON:0004808;2.36e-10;4!UBERON:0001277;2.36e-10;4!UBERON:0002680;4.31e-10;9!UBERON:0001895;4.31e-10;9!UBERON:0002107;2.74e-08;19!UBERON:0006925;2.74e-08;19!UBERON:0004733;1.08e-07;12!UBERON:0002028;1.08e-07;12!UBERON:0004732;3.89e-07;13!UBERON:0002368;4.48e-07;33!UBERON:0005409;9.67e-07;22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.60e-15,6;UBERON:0006215,4.60e-15,6;UBERON:0002680,3.16e-10,9;UBERON:0001895,3.16e-10,9;UBERON:0010092,3.16e-10,9;UBERON:0001242,3.29e-10,4;UBERON:0001262,3.29e-10,4;UBERON:0004786,3.29e-10,4;UBERON:0004808,3.29e-10,4;UBERON:0001277,3.29e-10,4;UBERON:0002107,2.91e-08,19;UBERON:0006925,2.91e-08,19;UBERON:0008836,2.91e-08,19;UBERON:0005172,5.33e-08,54;UBERON:0005173,5.33e-08,54;UBERON:0004733,8.58e-08,12;UBERON:0002028,8.58e-08,12;UBERON:0007277,8.58e-08,12;UBERON:0004732,3.15e-07,13;UBERON:0008835,3.73e-07,22;UBERON:0003894,3.73e-07,22;UBERON:0002417,3.99e-07,60;UBERON:0000916,3.99e-07,60;UBERON:0009854,7.54e-07,23 | |||
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| ||
|short_description=p5@PDZK1 | |short_description=p5@PDZK1 | ||
}} | }} |
Latest revision as of 18:58, 16 September 2015
Short description: | p5@PDZK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDZK1_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | -14bp_to_NM_001201325, NM_001201326, NM_002614_5end |
EntrezGene: | PDZK1 |
HGNC: | 8821 |
UniProt: | Q5T2W1B4DPB9E7EU02 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.29e-10 | 4 |
hepatocyte | 1.16e-07 | 12 |
endodermal cell | 3.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.60e-15 | 6 |
rhombic lip | 4.60e-15 | 6 |
regional part of metencephalon | 3.16e-10 | 9 |
metencephalon | 3.16e-10 | 9 |
future metencephalon | 3.16e-10 | 9 |
intestinal mucosa | 3.29e-10 | 4 |
wall of intestine | 3.29e-10 | 4 |
gastrointestinal system mucosa | 3.29e-10 | 4 |
gastrointestinal system epithelium | 3.29e-10 | 4 |
intestinal epithelium | 3.29e-10 | 4 |
liver | 2.91e-08 | 19 |
digestive gland | 2.91e-08 | 19 |
liver bud | 2.91e-08 | 19 |
abdomen element | 5.33e-08 | 54 |
abdominal segment element | 5.33e-08 | 54 |
segmental subdivision of hindbrain | 8.58e-08 | 12 |
hindbrain | 8.58e-08 | 12 |
presumptive hindbrain | 8.58e-08 | 12 |
segmental subdivision of nervous system | 3.15e-07 | 13 |
hepatic diverticulum | 3.73e-07 | 22 |
liver primordium | 3.73e-07 | 22 |
abdominal segment of trunk | 3.99e-07 | 60 |
abdomen | 3.99e-07 | 60 |
digestive tract diverticulum | 7.54e-07 | 23 |