FFCP PHASE1:Hg19::chr10:123325052..123325063,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2263 | |EntrezGene=2263 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3689 | |HGNC=3689 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=361bp_to_ENST00000491475_5end | |association_with_transcript=361bp_to_ENST00000491475_5end | ||
|cluster_id=chr10:123325052..123325063,- | |||
|coexpression_cluster_id=C164 | |coexpression_cluster_id=C164 | ||
|description=CAGE_peak_13_at_FGFR2_5end | |description=CAGE_peak_13_at_FGFR2_5end | ||
|id=chr10:123325052..123325063,- | |id=chr10:123325052..123325063,- | ||
|ontology_enrichment_celltype=CL:0002178;6.76e-18;3!CL:0002569;1.32e-09;6 | |ontology_enrichment_celltype=CL:0000039!1.73e-09!7;CL:0000586!1.73e-09!7;CL:0002322!5.77e-08!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0002178;6.76e-18;3!CL:0002569;1.32e-09;6 | ||
|ontology_enrichment_disease=DOID:3493;4.32e-26;2 | |ontology_enrichment_celltype_v019_2=CL:0002178,6.76e-18,3;CL:0002569,1.32e-09,6 | ||
|ontology_enrichment_uberon=UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0003422;1.32e-09;6!UBERON:0002037;1.50e-09;6!UBERON:0003104;2.03e-08;7!UBERON:0009142;2.03e-08;7!UBERON:0002680;8.61e-07;9!UBERON:0001895;8.61e-07;9 | |ontology_enrichment_development_v019=UBERON:0006215;1.03e-17;3 | ||
|ontology_enrichment_disease=DOID:305!5.56e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.22e-10!57;UBERON:0005068!7.22e-10!57;UBERON:0006241!7.22e-10!57;UBERON:0007135!7.22e-10!57;UBERON:0005743!1.63e-08!86;UBERON:0003133!2.45e-08!48;UBERON:0005156!2.77e-08!59;UBERON:0000990!2.77e-08!59;UBERON:0000955!2.83e-08!69;UBERON:0006238!2.83e-08!69;UBERON:0001017!3.34e-08!82;UBERON:0007023!3.43e-08!115;UBERON:0003135!4.83e-08!11;UBERON:0003075!1.21e-07!86;UBERON:0007284!1.21e-07!86;UBERON:0000073!3.02e-07!94;UBERON:0001016!3.02e-07!94;UBERON:0002346!4.28e-07!90;UBERON:0002616!4.85e-07!59;UBERON:0002791!8.67e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000945;2.66e-11;5!UBERON:0010039;2.66e-11;5!UBERON:0002021;3.42e-11;5!UBERON:0003422;1.32e-09;6!UBERON:0002037;1.50e-09;6!UBERON:0003104;2.03e-08;7!UBERON:0009142;2.03e-08;7!UBERON:0002680;8.61e-07;9!UBERON:0001895;8.61e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,3.60e-11,5;UBERON:0003422,1.32e-09,6;UBERON:0002037,1.44e-09,6;UBERON:0006215,1.44e-09,6;UBERON:0000945,1.49e-07,8;UBERON:0010039,1.49e-07,8;UBERON:0002680,8.37e-07,9;UBERON:0001895,8.37e-07,9;UBERON:0010092,8.37e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0.264768380074501,0.451961481561065,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0.550285795565037,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.335566295393377,7.65571822198895,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0.573358332605805,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0.126166424835079,0,0.380095503034311,0.203977659483963,0,0.0918948995348449,0.752122617877125,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,2.29723871668228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0.200506470303285,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.27470839445503,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854592569019785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0.139423744278603,0.0769502585037971,0.113942055847001,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,0,0,0,0.134802265961354,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0.103688191397247,0,0,0,0,0,0,0.173559738335131,0,0.0870592065804026,0.34945333648406,0,0,0,0,0.193978032976839,0.264768380074501,0.451961481561065,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.124192805882767,0.415045904808692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41696576325585,0,0,0,0,0,0,0,0,0.550285795565037,0.346576998451015,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0,0.68732060563215,0,0,0.335566295393377,7.65571822198895,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0.392616934229891,0.297046400327086,0,0,0,0,0,0.178553938605658,0,0,0,0,0.573358332605805,0.157771562193185,0.135982980381829,0,0.5290268405154,0,0,0,0.126166424835079,0,0.380095503034311,0.203977659483963,0,0.0918948995348449,0.752122617877125,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0,0,0.665320713092027,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p13@FGFR2 | |short_description=p13@FGFR2 | ||
}} | }} |
Latest revision as of 19:15, 16 September 2015
Short description: | p13@FGFR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FGFR2_5end |
Coexpression cluster: | C164_signet_corpus_optic_mucinous_substantia_salivary_choriocarcinoma |
Association with transcript: | 361bp_to_ENST00000491475_5end |
EntrezGene: | FGFR2 |
HGNC: | 3689 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 6.76e-18 | 3 |
mesenchymal stem cell of umbilical cord | 1.32e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 3.60e-11 | 5 |
mesenchyme of umbilical cord | 1.32e-09 | 6 |
cerebellum | 1.44e-09 | 6 |
rhombic lip | 1.44e-09 | 6 |
stomach | 1.49e-07 | 8 |
food storage organ | 1.49e-07 | 8 |
regional part of metencephalon | 8.37e-07 | 9 |
metencephalon | 8.37e-07 | 9 |
future metencephalon | 8.37e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |